{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,16]],"date-time":"2026-10-16T06:37:02Z","timestamp":1792132622441,"version":"4.4.0"},"reference-count":57,"publisher":"American Society for Microbiology","issue":"2","license":[{"start":{"date-parts":[[2020,4,28]],"date-time":"2020-04-28T00:00:00Z","timestamp":1588032000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/doi.org\/10.1128\/AuthorWarrantyLicense.v1"},{"start":{"date-parts":[[2020,4,28]],"date-time":"2020-04-28T00:00:00Z","timestamp":1588032000000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"funder":[{"DOI":"10.13039\/100000060","name":"HHS | NIH | National Institute of Allergy and Infectious Diseases","doi-asserted-by":"publisher","award":["U19AI110818"],"award-info":[{"award-number":["U19AI110818"]}],"id":[{"id":"10.13039\/100000060","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100000030","name":"HHS | Centers for Disease Control and Prevention","doi-asserted-by":"publisher","id":[{"id":"10.13039\/100000030","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["mBio"],"published-print":{"date-parts":[[2020,4,28]]},"abstract":"<jats:p>\n                    In less than a decade,\n                    <jats:named-content content-type=\"genus-species\">C. auris<\/jats:named-content>\n                    has emerged in health care settings worldwide; this species is capable of colonizing skin and causing outbreaks of invasive candidiasis. In contrast to other\n                    <jats:italic>Candida<\/jats:italic>\n                    species,\n                    <jats:named-content content-type=\"genus-species\">C. auris<\/jats:named-content>\n                    is unique in its ability to spread via nosocomial transmission and its high rates of drug resistance. As part of the public health response, whole-genome sequencing has played a major role in characterizing transmission dynamics and detecting new\n                    <jats:named-content content-type=\"genus-species\">C. auris<\/jats:named-content>\n                    introductions. Through a global collaboration, we assessed genome evolution of isolates of\n                    <jats:named-content content-type=\"genus-species\">C. auris<\/jats:named-content>\n                    from 19 countries. Here, we described estimated timing of the expansion of each\n                    <jats:named-content content-type=\"genus-species\">C. auris<\/jats:named-content>\n                    clade and of fluconazole resistance, characterized discrete phylogeographic population structure of each clade, and compared genome data to sensitivity measurements to describe how antifungal resistance mechanisms vary across the population. These efforts are critical for a sustained, robust public health response that effectively utilizes molecular epidemiology.\n                  <\/jats:p>","DOI":"10.1128\/mbio.03364-19","type":"journal-article","created":{"date-parts":[[2020,4,27]],"date-time":"2020-04-27T13:13:34Z","timestamp":1587993214000},"update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":436,"title":["Tracing the Evolutionary History and Global Expansion of Candida auris Using Population Genomic Analyses"],"prefix":"10.1128","volume":"11","author":[{"given":"Nancy A.","family":"Chow","sequence":"first","affiliation":[{"name":"Mycotic Diseases Branch, Centers for Disease Control and Prevention, U.S. Department of Health and Human Services, Atlanta, Georgia, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-4987-7957","authenticated-orcid":false,"given":"Jos\u00e9 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Canada"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Belinda","family":"Calvo","sequence":"additional","affiliation":[{"name":"Department of Infectious Diseases, School of Medicine, Universidad del Zulia, Maracaibo, Venezuela"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-9137-0466","authenticated-orcid":false,"given":"Marie","family":"Desnos-Ollivier","sequence":"additional","affiliation":[{"name":"Institut Pasteur, Molecular Mycology Unit, CNRS UMR2000, National Reference Center for Invasive Mycoses and Antifungals (NRCMA), Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Patricia","family":"Escand\u00f3n","sequence":"additional","affiliation":[{"name":"Grupo de Microbiolog\u00eda, Instituto Nacional de Salud, Bogot\u00e1, Colombia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Dianne","family":"Gardam","sequence":"additional","affiliation":[{"name":"Department of 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Candida auris, nouvel arrivant \u00e0 La R\u00e9union en provenance d\u2019Inde, p CO-098. In 39eme Reunion Interdisciplinaire de Chimioth\u00e9rapie anti-infectieuse. Europa Organisation, 15-17 December 2019, Paris, France. https:\/\/programme.europa-organisation.com\/slides\/programme_ricai-2019\/CO-098.pdf."},{"key":"e_1_3_2_28_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.ijid.2019.06.001"},{"key":"e_1_3_2_29_2","doi-asserted-by":"publisher","DOI":"10.1007\/s00294-019-00976-w"},{"key":"e_1_3_2_30_2","doi-asserted-by":"crossref","unstructured":"Mu\u00f1oz JF Welsh RM Shea T Batra D Gade L Litvintseva AP Cuomo CA. 2019. 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