{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,23]],"date-time":"2026-10-23T23:36:36Z","timestamp":1792798596982,"version":"4.5.0"},"reference-count":283,"publisher":"American Society for Microbiology","issue":"3","license":[{"start":{"date-parts":[[2019,8,21]],"date-time":"2019-08-21T00:00:00Z","timestamp":1566345600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"funder":[{"name":"Royal Society Wolfson Research Merit Award","award":["WM160092"],"award-info":[{"award-number":["WM160092"]}],"id":[{"id":"https:\/\/ror.org\/03wnrjx87","id-type":"ROR","asserted-by":"crossref"}]},{"name":"Vedanta Biosciences Inc.","award":["Unrestricted"],"award-info":[{"award-number":["Unrestricted"]}]},{"DOI":"10.13039\/100000002","name":"HHS | National Institutes of Health","doi-asserted-by":"publisher","award":["AI124255"],"award-info":[{"award-number":["AI124255"]}],"id":[{"id":"10.13039\/100000002","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["Microbiol Mol Biol Rev"],"published-print":{"date-parts":[[2019,8,21]]},"abstract":"<jats:p>The gut microbiome is critical in providing resistance against colonization by exogenous microorganisms. The mechanisms via which the gut microbiota provide colonization resistance (CR) have not been fully elucidated, but they include secretion of antimicrobial products, nutrient competition, support of gut barrier integrity, and bacteriophage deployment.<\/jats:p>","DOI":"10.1128\/mmbr.00007-19","type":"journal-article","created":{"date-parts":[[2019,6,4]],"date-time":"2019-06-04T12:00:06Z","timestamp":1559649606000},"update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":534,"title":["Gut Microbiota and Colonization Resistance against Bacterial Enteric Infection"],"prefix":"10.1128","volume":"83","author":[{"given":"Q. R.","family":"Ducarmon","sequence":"first","affiliation":[{"name":"Center for Microbiome Analyses and Therapeutics, Leiden University Medical Center, Leiden, Netherlands"},{"name":"Experimental Bacteriology, Department of Medical Microbiology, Leiden University Medical Center, Leiden, Netherlands"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"R. D.","family":"Zwittink","sequence":"additional","affiliation":[{"name":"Center for Microbiome Analyses and Therapeutics, Leiden University Medical Center, Leiden, Netherlands"},{"name":"Experimental Bacteriology, Department of Medical Microbiology, Leiden University Medical Center, Leiden, Netherlands"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"B. V. H.","family":"Hornung","sequence":"additional","affiliation":[{"name":"Center for Microbiome Analyses and Therapeutics, Leiden University Medical Center, Leiden, Netherlands"},{"name":"Experimental Bacteriology, Department of Medical Microbiology, Leiden University Medical Center, Leiden, Netherlands"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"W.","family":"van Schaik","sequence":"additional","affiliation":[{"name":"Institute of Microbiology and Infection, University of Birmingham, Birmingham, United Kingdom"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3687-2364","authenticated-orcid":false,"given":"V. B.","family":"Young","sequence":"additional","affiliation":[{"name":"Department of Microbiology and Immunology, University of Michigan, Ann Arbor, Michigan, USA"},{"name":"Department of Internal Medicine\/Infectious Diseases Division, University of Michigan Medical Center, Ann Arbor, Michigan, USA"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"E. J.","family":"Kuijper","sequence":"additional","affiliation":[{"name":"Center for Microbiome Analyses and Therapeutics, Leiden University Medical Center, Leiden, Netherlands"},{"name":"Experimental Bacteriology, Department of Medical Microbiology, Leiden University Medical Center, Leiden, Netherlands"},{"name":"Clinical Microbiology Laboratory, Department of Medical Microbiology, Leiden University Medical Center, Leiden, Netherlands"},{"name":"Netherlands Donor Feces Bank, Leiden, Netherlands"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"235","reference":[{"key":"e_1_3_2_2_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pbio.1002533"},{"key":"e_1_3_2_3_2","doi-asserted-by":"publisher","DOI":"10.1038\/nrmicro2974"},{"key":"e_1_3_2_4_2","doi-asserted-by":"publisher","DOI":"10.1126\/sciimmunol.aao1603"},{"key":"e_1_3_2_5_2","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2018.00432"},{"key":"e_1_3_2_6_2","doi-asserted-by":"publisher","DOI":"10.1155\/2018\/9830939"},{"key":"e_1_3_2_7_2","doi-asserted-by":"publisher","DOI":"10.1080\/19490976.2016.1277313"},{"key":"e_1_3_2_8_2","doi-asserted-by":"publisher","DOI":"10.1126\/science.1110591"},{"key":"e_1_3_2_9_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41586-019-0965"},{"key":"e_1_3_2_10_2","doi-asserted-by":"publisher","DOI":"10.1038\/nature07540"},{"key":"e_1_3_2_11_2","doi-asserted-by":"publisher","DOI":"10.1128\/AAC.38.3.409"},{"key":"e_1_3_2_12_2","doi-asserted-by":"publisher","DOI":"10.1084\/jem.20170495"},{"key":"e_1_3_2_13_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41579-018-0036-x"},{"key":"e_1_3_2_14_2","doi-asserted-by":"publisher","DOI":"10.1111\/imr.12567"},{"key":"e_1_3_2_15_2","doi-asserted-by":"publisher","DOI":"10.1111\/1462-2920.13589"},{"key":"e_1_3_2_16_2","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2016.00185"},{"key":"e_1_3_2_17_2","doi-asserted-by":"publisher","DOI":"10.1126\/science.aat9076"},{"key":"e_1_3_2_18_2","doi-asserted-by":"publisher","DOI":"10.1136\/gut.28.10.1221"},{"key":"e_1_3_2_19_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.145.3.1196-1208.1981"},{"key":"e_1_3_2_20_2","doi-asserted-by":"publisher","DOI":"10.1099\/00221287-148-7-2215"},{"key":"e_1_3_2_21_2","doi-asserted-by":"publisher","DOI":"10.1001\/archinte.159.22.2647"},{"key":"e_1_3_2_22_2","doi-asserted-by":"publisher","DOI":"10.1194\/jlr.R500013-JLR200"},{"key":"e_1_3_2_23_2","doi-asserted-by":"publisher","DOI":"10.1038\/nature13828"},{"key":"e_1_3_2_24_2","doi-asserted-by":"publisher","DOI":"10.1128\/aem.41.3.737-745.1981"},{"key":"e_1_3_2_25_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.bbalip.2007.10.008"},{"key":"e_1_3_2_26_2","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2017.01581"},{"key":"e_1_3_2_27_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.188.5.1979-1986.2006"},{"key":"e_1_3_2_28_2","doi-asserted-by":"publisher","DOI":"10.1194\/jlr.M075143"},{"key":"e_1_3_2_29_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.anaerobe.2017.03.004"},{"key":"e_1_3_2_30_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.cmet.2013.01.003"},{"key":"e_1_3_2_31_2","doi-asserted-by":"publisher","DOI":"10.1016\/S0168-8278(00)80183-X"},{"key":"e_1_3_2_32_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.00610-10"},{"key":"e_1_3_2_33_2","doi-asserted-by":"publisher","DOI":"10.3389\/fcimb.2016.00191"},{"key":"e_1_3_2_34_2","doi-asserted-by":"publisher","DOI":"10.1128\/JCM.01663-17"},{"key":"e_1_3_2_35_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.molimm.2008.06.020"},{"key":"e_1_3_2_36_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.molimm.2009.08.010"},{"key":"e_1_3_2_37_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0913554107"},{"key":"e_1_3_2_38_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.biochi.2006.12.005"},{"key":"e_1_3_2_39_2","doi-asserted-by":"publisher","DOI":"10.1007\/s10534-005-4452-9"},{"key":"e_1_3_2_40_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.molcel.2004.06.010"},{"key":"e_1_3_2_41_2","doi-asserted-by":"publisher","DOI":"10.1038\/nrmicro2937"},{"key":"e_1_3_2_42_2","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-4419-7692-5_4"},{"key":"e_1_3_2_43_2","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-4419-7692-5_3"},{"key":"e_1_3_2_44_2","doi-asserted-by":"publisher","DOI":"10.1093\/jac\/41.3.341"},{"key":"e_1_3_2_45_2","doi-asserted-by":"publisher","DOI":"10.1099\/jmm.0.000202"},{"key":"e_1_3_2_46_2","doi-asserted-by":"publisher","DOI":"10.3168\/jds.S0022-0302(88)79929-4"},{"key":"e_1_3_2_47_2","doi-asserted-by":"publisher","DOI":"10.1128\/aem.57.12.3613-3615.1991"},{"key":"e_1_3_2_48_2","doi-asserted-by":"publisher","DOI":"10.1111\/jam.12680"},{"key":"e_1_3_2_49_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0076844"},{"key":"e_1_3_2_50_2","doi-asserted-by":"publisher","DOI":"10.1093\/jac\/dku049"},{"key":"e_1_3_2_51_2","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.00052-18"},{"key":"e_1_3_2_52_2","doi-asserted-by":"publisher","DOI":"10.1128\/AAC.05031-11"},{"key":"e_1_3_2_53_2","doi-asserted-by":"publisher","DOI":"10.2174\/1381612053381666"},{"key":"e_1_3_2_54_2","doi-asserted-by":"publisher","DOI":"10.1126\/science.1129818"},{"key":"e_1_3_2_55_2","doi-asserted-by":"publisher","DOI":"10.1074\/jbc.M006770200"},{"key":"e_1_3_2_56_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0700440104"},{"key":"e_1_3_2_57_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1001224107"},{"key":"e_1_3_2_58_2","doi-asserted-by":"publisher","DOI":"10.1099\/mic.0.068767-0"},{"key":"e_1_3_2_59_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.cell.2016.10.043"},{"key":"e_1_3_2_60_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-018-30729-7"},{"key":"e_1_3_2_61_2","doi-asserted-by":"publisher","DOI":"10.1016\/S0065-2164(04)54005-4"},{"key":"e_1_3_2_62_2","doi-asserted-by":"publisher","DOI":"10.1038\/nature20557"},{"key":"e_1_3_2_63_2","doi-asserted-by":"publisher","DOI":"10.1042\/BST20120183"},{"key":"e_1_3_2_64_2","doi-asserted-by":"publisher","DOI":"10.1186\/s12866-015-0515-4"},{"key":"e_1_3_2_65_2","doi-asserted-by":"publisher","DOI":"10.1007\/s10482-008-9222-6"},{"key":"e_1_3_2_66_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.01386-07"},{"key":"e_1_3_2_67_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0053957"},{"key":"e_1_3_2_68_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2013.06.007"},{"key":"e_1_3_2_69_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0806162105"},{"key":"e_1_3_2_70_2","doi-asserted-by":"publisher","DOI":"10.1038\/nri3608"},{"key":"e_1_3_2_71_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1306070110"},{"key":"e_1_3_2_72_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1006451107"},{"key":"e_1_3_2_73_2","doi-asserted-by":"publisher","DOI":"10.1152\/ajpgi.2001.280.5.G922"},{"key":"e_1_3_2_74_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2017.11.004"},{"key":"e_1_3_2_75_2","doi-asserted-by":"publisher","DOI":"10.15252\/embr.201439263"},{"key":"e_1_3_2_76_2","doi-asserted-by":"publisher","DOI":"10.1002\/bies.201400152"},{"key":"e_1_3_2_77_2","doi-asserted-by":"publisher","DOI":"10.1038\/nrmicro.2017.30"},{"key":"e_1_3_2_78_2","doi-asserted-by":"publisher","DOI":"10.4161\/viru.25991"},{"key":"e_1_3_2_79_2","doi-asserted-by":"publisher","DOI":"10.1038\/ncomms14187"},{"key":"e_1_3_2_80_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0078543"},{"key":"e_1_3_2_81_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1206136109"},{"key":"e_1_3_2_82_2","doi-asserted-by":"publisher","DOI":"10.4161\/bact.24872"},{"key":"e_1_3_2_83_2","doi-asserted-by":"publisher","DOI":"10.1128\/AAC.00954-17"},{"key":"e_1_3_2_84_2","doi-asserted-by":"publisher","DOI":"10.1093\/emph\/eoy005"},{"key":"e_1_3_2_85_2","doi-asserted-by":"publisher","DOI":"10.1146\/annurev-micro-091313-103456"},{"key":"e_1_3_2_86_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.molmed.2016.04.003"},{"key":"e_1_3_2_87_2","doi-asserted-by":"publisher","DOI":"10.1136\/bmj.39406.449456.BE"},{"key":"e_1_3_2_88_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1572-0241.2007.01275.x"},{"key":"e_1_3_2_89_2","doi-asserted-by":"publisher","DOI":"10.1111\/bcp.13205"},{"key":"e_1_3_2_90_2","doi-asserted-by":"publisher","DOI":"10.1177\/1060028018760569"},{"key":"e_1_3_2_91_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2036.2011.04874.x"},{"key":"e_1_3_2_92_2","doi-asserted-by":"publisher","DOI":"10.1053\/j.gastro.2015.06.043"},{"key":"e_1_3_2_93_2","doi-asserted-by":"publisher","DOI":"10.1136\/gutjnl-2015-310376"},{"key":"e_1_3_2_94_2","doi-asserted-by":"publisher","DOI":"10.1136\/gutjnl-2015-310861"},{"key":"e_1_3_2_95_2","doi-asserted-by":"publisher","DOI":"10.3164\/jcbn.17-78"},{"key":"e_1_3_2_96_2","doi-asserted-by":"publisher","DOI":"10.1088\/1752-7163\/aa9dcf"},{"key":"e_1_3_2_97_2","doi-asserted-by":"publisher","DOI":"10.1007\/s10620-017-4905-3"},{"key":"e_1_3_2_98_2","doi-asserted-by":"publisher","DOI":"10.1128\/AAC.00522-06"},{"key":"e_1_3_2_99_2","doi-asserted-by":"publisher","DOI":"10.1080\/19490976.2017.1284732"},{"key":"e_1_3_2_100_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.cmet.2014.09.018"},{"key":"e_1_3_2_101_2","doi-asserted-by":"publisher","DOI":"10.1038\/nm0106-75"},{"key":"e_1_3_2_102_2","doi-asserted-by":"publisher","DOI":"10.1038\/nature15766"},{"key":"e_1_3_2_103_2","doi-asserted-by":"publisher","DOI":"10.1038\/nature11450"},{"key":"e_1_3_2_104_2","doi-asserted-by":"publisher","DOI":"10.1038\/nm.4345"},{"key":"e_1_3_2_105_2","doi-asserted-by":"publisher","DOI":"10.26355\/eurrev_201711_13847"},{"key":"e_1_3_2_106_2","doi-asserted-by":"publisher","DOI":"10.1111\/jcmm.13342"},{"key":"e_1_3_2_107_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0168670"},{"key":"e_1_3_2_108_2","doi-asserted-by":"publisher","DOI":"10.1038\/nature25979"},{"key":"e_1_3_2_109_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0115225"},{"key":"e_1_3_2_110_2","doi-asserted-by":"publisher","DOI":"10.1128\/AAC.00607-08"},{"key":"e_1_3_2_111_2","doi-asserted-by":"publisher","DOI":"10.1179\/joc.1995.7.3.201"},{"key":"e_1_3_2_112_2","doi-asserted-by":"publisher","DOI":"10.1007\/s10096-011-1435-3"},{"key":"e_1_3_2_113_2","doi-asserted-by":"publisher","DOI":"10.1007\/s00213-018-5006-5"},{"key":"e_1_3_2_114_2","doi-asserted-by":"publisher","DOI":"10.1186\/1741-7015-11-121"},{"key":"e_1_3_2_115_2","doi-asserted-by":"publisher","DOI":"10.1128\/microbiolspec.VMBF-0016-2015"},{"key":"e_1_3_2_116_2","doi-asserted-by":"publisher","DOI":"10.1128\/MMBR.00016-10"},{"key":"e_1_3_2_117_2","doi-asserted-by":"publisher","DOI":"10.1056\/NEJMoa1408913"},{"key":"e_1_3_2_118_2","doi-asserted-by":"publisher","DOI":"10.1038\/nrdp.2016.20"},{"key":"e_1_3_2_119_2","doi-asserted-by":"publisher","DOI":"10.1128\/CMR.00021-17"},{"key":"e_1_3_2_120_2","doi-asserted-by":"publisher","DOI":"10.1146\/annurev-med-070813-114317"},{"key":"e_1_3_2_121_2","doi-asserted-by":"publisher","DOI":"10.1038\/ncomms4114"},{"key":"e_1_3_2_122_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1002995"},{"key":"e_1_3_2_123_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.anaerobe.2018.04.001"},{"key":"e_1_3_2_124_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.01765-07"},{"key":"e_1_3_2_125_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.01260-08"},{"key":"e_1_3_2_126_2","doi-asserted-by":"publisher","DOI":"10.1128\/jcm.18.4.1017-1019.1983"},{"key":"e_1_3_2_127_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.anaerobe.2016.05.010"},{"key":"e_1_3_2_128_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.00731-10"},{"key":"e_1_3_2_129_2","doi-asserted-by":"publisher","DOI":"10.1099\/mic.0.045997-0"},{"key":"e_1_3_2_130_2","doi-asserted-by":"publisher","DOI":"10.1128\/mSystems.00063-17"},{"key":"e_1_3_2_131_2","doi-asserted-by":"publisher","DOI":"10.1128\/mSphere.00261-18"},{"key":"e_1_3_2_132_2","doi-asserted-by":"publisher","DOI":"10.1038\/nature25178"},{"key":"e_1_3_2_133_2","doi-asserted-by":"publisher","DOI":"10.1080\/19490976.2018.1491266"},{"key":"e_1_3_2_134_2","doi-asserted-by":"publisher","DOI":"10.1038\/nature12503"},{"key":"e_1_3_2_135_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2014.11.003"},{"key":"e_1_3_2_136_2","doi-asserted-by":"publisher","DOI":"10.1038\/nm.4174"},{"key":"e_1_3_2_137_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.69.12.7937-7940.2001"},{"key":"e_1_3_2_138_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.00943-17"},{"key":"e_1_3_2_139_2","doi-asserted-by":"publisher","DOI":"10.3201\/eid2106.140999"},{"key":"e_1_3_2_140_2","doi-asserted-by":"publisher","DOI":"10.1016\/S0140-6736(11)61752-2"},{"key":"e_1_3_2_141_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.73.6.3219-3227.2005"},{"key":"e_1_3_2_142_2","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.64.9.3458-3463.1998"},{"key":"e_1_3_2_143_2","doi-asserted-by":"publisher","DOI":"10.1046\/j.1365-2958.2002.03268.x"},{"key":"e_1_3_2_144_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2018.01.004"},{"key":"e_1_3_2_145_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2018.07.002"},{"key":"e_1_3_2_146_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.67.4.1614-1622.1999"},{"key":"e_1_3_2_147_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.1002459"},{"key":"e_1_3_2_148_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.00177-16"},{"key":"e_1_3_2_149_2","doi-asserted-by":"publisher","DOI":"10.1016\/S0168-1605(99)00026-4"},{"key":"e_1_3_2_150_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2017.11.006"},{"key":"e_1_3_2_151_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pbio.0050244"},{"key":"e_1_3_2_152_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2016.03.004"},{"key":"e_1_3_2_153_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2017.07.018"},{"key":"e_1_3_2_154_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1107857108"},{"key":"e_1_3_2_155_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1006129"},{"key":"e_1_3_2_156_2","doi-asserted-by":"publisher","DOI":"10.1038\/nature18597"},{"key":"e_1_3_2_157_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.00854-13"},{"key":"e_1_3_2_158_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0074963"},{"key":"e_1_3_2_159_2","doi-asserted-by":"publisher","DOI":"10.4161\/19490976.2014.969979"},{"key":"e_1_3_2_160_2","doi-asserted-by":"publisher","DOI":"10.1093\/infdis\/157.5.1054"},{"key":"e_1_3_2_161_2","volume-title":"Manual of clinical microbiology","author":"Carroll KC","year":"2019","unstructured":"Carroll KC, Pfaller MA, Landry ML, McAdam AJ, Patel R, Richter SS, Warnock DW. 2019. Manual of clinical microbiology, 12th ed, vol 1. ASM Press, Washington, DC.","edition":"12"},{"key":"e_1_3_2_162_2","doi-asserted-by":"publisher","DOI":"10.1038\/srep27070"},{"key":"e_1_3_2_163_2","doi-asserted-by":"publisher","DOI":"10.1099\/mic.0.023499-0"},{"key":"e_1_3_2_164_2","doi-asserted-by":"publisher","DOI":"10.1111\/mmi.12737"},{"key":"e_1_3_2_165_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1222014110"},{"key":"e_1_3_2_166_2","doi-asserted-by":"publisher","DOI":"10.1038\/nature09646"},{"key":"e_1_3_2_167_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.00200-11"},{"key":"e_1_3_2_168_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2672.2004.02452.x"},{"key":"e_1_3_2_169_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1462-2920.2010.02334.x"},{"key":"e_1_3_2_170_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0098367"},{"key":"e_1_3_2_171_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.72.3.1666-1676.2004"},{"key":"e_1_3_2_172_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2014.11.005"},{"key":"e_1_3_2_173_2","doi-asserted-by":"publisher","DOI":"10.1038\/nature11623"},{"key":"e_1_3_2_174_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.jcmgh.2015.10.001"},{"key":"e_1_3_2_175_2","doi-asserted-by":"publisher","DOI":"10.1111\/cmi.12717"},{"key":"e_1_3_2_176_2","first-page":"651","article-title":"Global burden of Shigella infections implications for vaccine development","volume":"77","author":"Kotloff KL","year":"1999","unstructured":"Kotloff KL, Winickoff JP, Ivanoff B, Clemens JD, Swerdlow DL, Sansonetti PJ, Adak GK, Levine MM. 1999. Global burden of Shigella infections implications for vaccine development. Bull World Health Organ 77:651\u2013666.","journal-title":"Bull World Health Organ"},{"key":"e_1_3_2_177_2","doi-asserted-by":"publisher","DOI":"10.1016\/S0140-6736(17)33296-8"},{"key":"e_1_3_2_178_2","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2334-12-111"},{"key":"e_1_3_2_179_2","doi-asserted-by":"publisher","DOI":"10.1084\/jem.20071698"},{"key":"e_1_3_2_180_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.01599-06"},{"key":"e_1_3_2_181_2","doi-asserted-by":"publisher","DOI":"10.1074\/jbc.M802799200"},{"key":"e_1_3_2_182_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2014.03.001"},{"key":"e_1_3_2_183_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.01067-16"},{"key":"e_1_3_2_184_2","doi-asserted-by":"publisher","DOI":"10.1038\/84627"},{"key":"e_1_3_2_185_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1406694111"},{"key":"e_1_3_2_186_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.01575-13"},{"key":"e_1_3_2_187_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.00551-13"},{"key":"e_1_3_2_188_2","doi-asserted-by":"publisher","DOI":"10.1128\/CMR.00006-15"},{"key":"e_1_3_2_189_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41564-018-0133-7"},{"key":"e_1_3_2_190_2","doi-asserted-by":"publisher","DOI":"10.1128\/mBio.00407-17"},{"key":"e_1_3_2_191_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.71.8.4250-4259.2003"},{"key":"e_1_3_2_192_2","doi-asserted-by":"publisher","DOI":"10.1053\/j.gastro.2018.01.042"},{"key":"e_1_3_2_193_2","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.02094-10"},{"key":"e_1_3_2_194_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2672.2011.05163.x"},{"key":"e_1_3_2_195_2","doi-asserted-by":"publisher","DOI":"10.1099\/00221287-148-3-685"},{"key":"e_1_3_2_196_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.mimet.2009.12.011"},{"key":"e_1_3_2_197_2","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2164-12-584"},{"key":"e_1_3_2_198_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.01252-10"},{"key":"e_1_3_2_199_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.72.1.260-268.2004"},{"key":"e_1_3_2_200_2","doi-asserted-by":"publisher","DOI":"10.1099\/mic.0.021790-0"},{"key":"e_1_3_2_201_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2672.1997.tb02873.x"},{"key":"e_1_3_2_202_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.186.14.4714-4729.2004"},{"key":"e_1_3_2_203_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.01761-07"},{"key":"e_1_3_2_204_2","doi-asserted-by":"publisher","DOI":"10.1128\/mBio.01347-18"},{"key":"e_1_3_2_205_2","doi-asserted-by":"publisher","DOI":"10.1099\/00221287-134-1-53"},{"key":"e_1_3_2_206_2","doi-asserted-by":"publisher","DOI":"10.1128\/iai.63.11.4295-4300.1995"},{"key":"e_1_3_2_207_2","doi-asserted-by":"publisher","DOI":"10.1128\/iai.53.1.141-148.1986"},{"key":"e_1_3_2_208_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.00751-16"},{"key":"e_1_3_2_209_2","doi-asserted-by":"publisher","DOI":"10.1093\/infdis\/97.1.57"},{"key":"e_1_3_2_210_2","doi-asserted-by":"publisher","DOI":"10.1056\/NEJMoa1204927"},{"key":"e_1_3_2_211_2","doi-asserted-by":"publisher","DOI":"10.1128\/CMR.8.1.48"},{"key":"e_1_3_2_212_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2014.10.006"},{"key":"e_1_3_2_213_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.65.3.1131-1134.1997"},{"key":"e_1_3_2_214_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.01435-06"},{"key":"e_1_3_2_215_2","doi-asserted-by":"publisher","DOI":"10.1186\/s13099-014-0038-9"},{"key":"e_1_3_2_216_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.68.3.1491-1497.2000"},{"key":"e_1_3_2_217_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.bpj.2010.01.010"},{"key":"e_1_3_2_218_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.00419-15"},{"key":"e_1_3_2_219_2","doi-asserted-by":"publisher","DOI":"10.1128\/mBio.02237-15"},{"key":"e_1_3_2_220_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.00695-06"},{"key":"e_1_3_2_221_2","doi-asserted-by":"publisher","DOI":"10.1128\/iai.11.5.890-897.1975"},{"key":"e_1_3_2_222_2","doi-asserted-by":"publisher","DOI":"10.1099\/mic.0.26086-0"},{"key":"e_1_3_2_223_2","doi-asserted-by":"publisher","DOI":"10.1099\/mic.0.044529-0"},{"key":"e_1_3_2_224_2","doi-asserted-by":"publisher","DOI":"10.1128\/iai.65.8.3474-3477.1997"},{"key":"e_1_3_2_225_2","doi-asserted-by":"publisher","DOI":"10.1128\/iai.45.3.558-560.1984"},{"key":"e_1_3_2_226_2","doi-asserted-by":"publisher","DOI":"10.1128\/iai.36.3.1199-1208.1982"},{"key":"e_1_3_2_227_2","doi-asserted-by":"publisher","DOI":"10.4061\/2011\/239391"},{"key":"e_1_3_2_228_2","doi-asserted-by":"publisher","DOI":"10.3390\/genes9050235"},{"key":"e_1_3_2_229_2","doi-asserted-by":"publisher","DOI":"10.1016\/S0168-1605(96)01194-4"},{"key":"e_1_3_2_230_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0124248"},{"key":"e_1_3_2_231_2","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2164-13-467"},{"key":"e_1_3_2_232_2","doi-asserted-by":"publisher","DOI":"10.1128\/iai.55.1.277-280.1987"},{"key":"e_1_3_2_233_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2958.1993.tb01583.x"},{"key":"e_1_3_2_234_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.micinf.2011.04.008"},{"key":"e_1_3_2_235_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.jprot.2015.04.015"},{"key":"e_1_3_2_236_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1317161111"},{"key":"e_1_3_2_237_2","doi-asserted-by":"publisher","DOI":"10.1136\/gut.32.10.1131"},{"key":"e_1_3_2_238_2","doi-asserted-by":"publisher","DOI":"10.1128\/iai.57.11.3292-3299.1989"},{"key":"e_1_3_2_239_2","doi-asserted-by":"publisher","DOI":"10.1128\/iai.62.4.1219-1227.1994"},{"key":"e_1_3_2_240_2","doi-asserted-by":"publisher","DOI":"10.1128\/iai.61.10.4131-4138.1993"},{"key":"e_1_3_2_241_2","doi-asserted-by":"publisher","DOI":"10.1128\/iai.59.1.253-260.1991"},{"key":"e_1_3_2_242_2","doi-asserted-by":"publisher","DOI":"10.1016\/S1473-3099(14)70870-9"},{"key":"e_1_3_2_243_2","doi-asserted-by":"publisher","DOI":"10.1017\/S0950268800059343"},{"key":"e_1_3_2_244_2","doi-asserted-by":"publisher","DOI":"10.1007\/s00018-003-2225-6"},{"key":"e_1_3_2_245_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.00045-12"},{"key":"e_1_3_2_246_2","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.01592-09"},{"key":"e_1_3_2_247_2","doi-asserted-by":"publisher","DOI":"10.3390\/pathogens7030060"},{"key":"e_1_3_2_248_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2958.2011.07683.x"},{"key":"e_1_3_2_249_2","doi-asserted-by":"publisher","DOI":"10.1099\/jmm.0.049742-0"},{"key":"e_1_3_2_250_2","doi-asserted-by":"publisher","DOI":"10.1046\/j.1365-2958.2002.03080.x"},{"key":"e_1_3_2_251_2","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.68.12.6005-6012.2002"},{"key":"e_1_3_2_252_2","doi-asserted-by":"publisher","DOI":"10.1099\/jmm.0.000160"},{"key":"e_1_3_2_253_2","doi-asserted-by":"publisher","DOI":"10.1128\/AAC.00503-10"},{"key":"e_1_3_2_254_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0608775104"},{"key":"e_1_3_2_255_2","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.02602-10"},{"key":"e_1_3_2_256_2","doi-asserted-by":"publisher","DOI":"10.1099\/00221287-147-12-3263"},{"key":"e_1_3_2_257_2","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2018.00347"},{"key":"e_1_3_2_258_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1523899113"},{"key":"e_1_3_2_259_2","doi-asserted-by":"publisher","DOI":"10.1111\/cmi.12762"},{"key":"e_1_3_2_260_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-017-17570-0"},{"key":"e_1_3_2_261_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.ijmm.2014.01.003"},{"key":"e_1_3_2_262_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.66.2.747-755.1998"},{"key":"e_1_3_2_263_2","doi-asserted-by":"publisher","DOI":"10.1007\/s00203-008-0358-6"},{"key":"e_1_3_2_264_2","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2017.00660"},{"key":"e_1_3_2_265_2","doi-asserted-by":"publisher","DOI":"10.1016\/0042-6822(80)90501-2"},{"key":"e_1_3_2_266_2","doi-asserted-by":"publisher","DOI":"10.1093\/femsle\/fnw015"},{"key":"e_1_3_2_267_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1558-5646.2009.00882.x"},{"key":"e_1_3_2_268_2","doi-asserted-by":"publisher","DOI":"10.1038\/nrmicro3525"},{"key":"e_1_3_2_269_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.00792-17"},{"key":"e_1_3_2_270_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1002917"},{"key":"e_1_3_2_271_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.00843-12"},{"key":"e_1_3_2_272_2","doi-asserted-by":"publisher","DOI":"10.1111\/mmi.12918"},{"key":"e_1_3_2_273_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.69.11.3138"},{"key":"e_1_3_2_274_2","doi-asserted-by":"publisher","DOI":"10.1042\/bj1270001"},{"key":"e_1_3_2_275_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.cub.2015.12.041"},{"key":"e_1_3_2_276_2","doi-asserted-by":"publisher","DOI":"10.1126\/science.aad5147"},{"key":"e_1_3_2_277_2","doi-asserted-by":"publisher","DOI":"10.1038\/nrmicro.2015.14"},{"key":"e_1_3_2_278_2","doi-asserted-by":"publisher","DOI":"10.1038\/ismej.2016.47"},{"key":"e_1_3_2_279_2","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkm360"},{"key":"e_1_3_2_280_2","doi-asserted-by":"publisher","DOI":"10.15252\/embj.201489455"},{"key":"e_1_3_2_281_2","doi-asserted-by":"publisher","DOI":"10.1128\/jb.68.1.36-42.1954"},{"key":"e_1_3_2_282_2","doi-asserted-by":"publisher","DOI":"10.1128\/jb.97.1.78-82.1969"},{"key":"e_1_3_2_283_2","doi-asserted-by":"publisher","DOI":"10.1128\/jvi.4.2.162-168.1969"},{"key":"e_1_3_2_284_2","doi-asserted-by":"publisher","DOI":"10.1111\/1574-6976.12074"}],"container-title":["Microbiology and Molecular Biology Reviews"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/MMBR.00007-19","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/MMBR.00007-19","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,3,7]],"date-time":"2022-03-07T22:58:27Z","timestamp":1646693907000},"score":1,"resource":{"primary":{"URL":"https:\/\/journals.asm.org\/doi\/10.1128\/MMBR.00007-19"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2019,8,21]]},"references-count":283,"journal-issue":{"issue":"3","published-print":{"date-parts":[[2019,8,21]]}},"alternative-id":["10.1128\/MMBR.00007-19"],"URL":"https:\/\/doi.org\/10.1128\/mmbr.00007-19","relation":{},"ISSN":["1092-2172","1098-5557"],"issn-type":[{"value":"1092-2172","type":"print"},{"value":"1098-5557","type":"electronic"}],"subject":[],"published":{"date-parts":[[2019,8,21]]},"assertion":[{"value":"2019-06-05","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}],"article-number":"e00007-19"}}