{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,30]],"date-time":"2026-07-30T19:01:35Z","timestamp":1785438095202,"version":"3.56.0"},"reference-count":14,"publisher":"American Society for Microbiology","issue":"9","license":[{"start":{"date-parts":[[2025,9,11]],"date-time":"2025-09-11T00:00:00Z","timestamp":1757548800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2025,9,11]],"date-time":"2025-09-11T00:00:00Z","timestamp":1757548800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["Microbiol Resour Announc"],"published-print":{"date-parts":[[2025,9,11]]},"abstract":"<jats:title>ABSTRACT<\/jats:title>\n                  <jats:sec>\n                    <jats:title\/>\n                    <jats:p>\n                      <jats:italic toggle=\"yes\">Cryptosporidium serpentis<\/jats:italic>\n                      is a protozoan parasite responsible for chronic clinical infections in reptiles, particularly snakes, leading to anorexia and lethargy. Here, we report the first metagenome-assembled genome of\n                      <jats:italic toggle=\"yes\">C. serpentis<\/jats:italic>\n                      derived from a gastric lavage sample from the eastern indigo snake,\n                      <jats:italic toggle=\"yes\">Drymarchon couperi<\/jats:italic>\n                      .\n                    <\/jats:p>\n                  <\/jats:sec>","DOI":"10.1128\/mra.00342-25","type":"journal-article","created":{"date-parts":[[2025,7,31]],"date-time":"2025-07-31T10:35:03Z","timestamp":1753958103000},"update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":1,"title":["First metagenome-assembled genome of\n                    <i>Cryptosporidium serpentis<\/i>\n                    from\n                    <i>Drymarchon couperi<\/i>\n                    gastric lavage"],"prefix":"10.1128","volume":"14","author":[{"ORCID":"https:\/\/orcid.org\/0009-0005-5411-0998","authenticated-orcid":true,"given":"Mark N.","family":"Yacoub","sequence":"first","affiliation":[{"id":[{"id":"https:\/\/ror.org\/01vsypp41","id-type":"ROR","asserted-by":"publisher"}],"name":"MiDOG Animal Diagnostics LLC","place":["Irvine, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-4865-7170","authenticated-orcid":false,"given":"Janina A.","family":"Krumbeck","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/01vsypp41","id-type":"ROR","asserted-by":"publisher"}],"name":"MiDOG Animal Diagnostics LLC","place":["Irvine, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-7049-7724","authenticated-orcid":false,"suffix":"Jr.","given":"James E.","family":"Bogan","sequence":"additional","affiliation":[{"name":"Central Florida Zoo\u2019s Orianne Center for Indigo Conservation","place":["Eustis, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Alexandra K.","family":"Mason","sequence":"additional","affiliation":[{"name":"Central Florida Zoo\u2019s Orianne Center for Indigo Conservation","place":["Eustis, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"235","reference":[{"key":"e_1_3_3_2_2","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.70.2.891-899.2004"},{"key":"e_1_3_3_3_2","doi-asserted-by":"publisher","DOI":"10.2460\/ajvr.24.05.0136"},{"key":"e_1_3_3_4_2","doi-asserted-by":"publisher","DOI":"10.1177\/030098587701400607"},{"key":"e_1_3_3_5_2","doi-asserted-by":"publisher","DOI":"10.1007\/s00436-022-07676-4"},{"key":"e_1_3_3_6_2","unstructured":"Andrews S. 2010. FastQC: a quality control tool for high throughput sequence data. Available from: http:\/\/www.bioinformatics.babraham.ac.uk\/projects\/fastqc"},{"key":"e_1_3_3_7_2","volume-title":"Trim galore!: a wrapper around cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data","author":"Krueger F","year":"2015","unstructured":"Krueger F. 2015. Trim galore!: a wrapper around cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data. Babraham Institute."},{"key":"e_1_3_3_8_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp324"},{"key":"e_1_3_3_9_2","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-019-1891-0"},{"key":"e_1_3_3_10_2","doi-asserted-by":"publisher","DOI":"10.1089\/cmb.2012.0021"},{"key":"e_1_3_3_11_2","doi-asserted-by":"publisher","DOI":"10.7717\/peerj.7359"},{"key":"e_1_3_3_12_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0185056"},{"key":"e_1_3_3_13_2","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-024-03198-7"},{"key":"e_1_3_3_14_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv351"},{"key":"e_1_3_3_15_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btt086"}],"container-title":["Microbiology Resource Announcements"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/mra.00342-25","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/mra.00342-25","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,9,11]],"date-time":"2025-09-11T13:01:18Z","timestamp":1757595678000},"score":1,"resource":{"primary":{"URL":"https:\/\/journals.asm.org\/doi\/10.1128\/mra.00342-25"}},"subtitle":[],"editor":[{"given":"Andr\u00e9 O.","family":"Hudson","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]}],"short-title":[],"issued":{"date-parts":[[2025,9,11]]},"references-count":14,"journal-issue":{"issue":"9","published-print":{"date-parts":[[2025,9,11]]}},"alternative-id":["10.1128\/mra.00342-25"],"URL":"https:\/\/doi.org\/10.1128\/mra.00342-25","relation":{},"ISSN":["2576-098X"],"issn-type":[{"value":"2576-098X","type":"electronic"}],"subject":[],"published":{"date-parts":[[2025,9,11]]},"assertion":[{"value":"2025-04-04","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2025-06-30","order":2,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2025-07-31","order":3,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}],"article-number":"e00342-25"}}