{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,7,30]],"date-time":"2025-07-30T13:18:00Z","timestamp":1753881480507,"version":"3.41.2"},"reference-count":16,"publisher":"American Society for Microbiology","issue":"11","license":[{"start":{"date-parts":[[2024,11,12]],"date-time":"2024-11-12T00:00:00Z","timestamp":1731369600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2024,11,12]],"date-time":"2024-11-12T00:00:00Z","timestamp":1731369600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["Microbiol Resour Announc"],"published-print":{"date-parts":[[2024,11,12]]},"abstract":"<jats:title>ABSTRACT<\/jats:title>\n          <jats:sec>\n            <jats:title\/>\n            <jats:p>\n              <jats:italic>Mannheimia haemolytica<\/jats:italic>\n              is a major bacterial pathogen associated with broncho- and fibrinous pneumonia in ruminants. Here, we report the complete genome sequence of an isolate of serotype A2\n              <jats:italic>M. haemolytica<\/jats:italic>\n              (D95) recovered from a pneumonic ovine lung. The D95 genome has a size of 2.7 Mb and contains 2,720 genes.\n            <\/jats:p>\n          <\/jats:sec>","DOI":"10.1128\/mra.00552-24","type":"journal-article","created":{"date-parts":[[2024,10,14]],"date-time":"2024-10-14T13:00:22Z","timestamp":1728910822000},"update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":0,"title":["Complete hybrid genome assembly of\n            <i>Mannheimia haemolytica<\/i>\n            serotype A2 strain D95 isolated from ovine lung"],"prefix":"10.1128","volume":"13","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-1510-465X","authenticated-orcid":false,"given":"Anna K.","family":"Goldkamp","sequence":"first","affiliation":[{"name":"Ruminant Diseases and Immunology Research Unit, National Animal Disease Center, United States Department of Agriculture, Agricultural Research Service, Ames, Iowa, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-6773-8304","authenticated-orcid":false,"given":"Harish","family":"Menghwar","sequence":"additional","affiliation":[{"name":"Ruminant Diseases and Immunology Research Unit, National Animal Disease Center, United States Department of Agriculture, Agricultural Research Service, Ames, Iowa, USA"},{"name":"ARS Research Participation Program, Oak Ridge Institute for Science and Education (ORISE), Oak Ridge, Tennessee, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Rohana P.","family":"Dassanayake","sequence":"additional","affiliation":[{"name":"Ruminant Diseases and Immunology Research Unit, National Animal Disease Center, United States Department of Agriculture, Agricultural Research Service, Ames, Iowa, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Fred M.","family":"Tatum","sequence":"additional","affiliation":[{"name":"Ruminant Diseases and Immunology Research Unit, National Animal Disease Center, United States Department of Agriculture, Agricultural Research Service, Ames, Iowa, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Robert E.","family":"Briggs","sequence":"additional","affiliation":[{"name":"Ruminant Diseases and Immunology Research Unit, National Animal Disease Center, United States Department of Agriculture, Agricultural Research Service, Ames, Iowa, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3773-4035","authenticated-orcid":false,"given":"Eduardo","family":"Casas","sequence":"additional","affiliation":[{"name":"Ruminant Diseases and Immunology Research Unit, National Animal Disease Center, United States Department of Agriculture, Agricultural Research Service, Ames, Iowa, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"235","reference":[{"key":"e_1_3_3_2_2","doi-asserted-by":"publisher","DOI":"10.1017\/S1466252314000188"},{"key":"e_1_3_3_3_2","doi-asserted-by":"publisher","DOI":"10.1177\/0300985810377182"},{"key":"e_1_3_3_4_2","doi-asserted-by":"publisher","DOI":"10.1051\/vetres:2004065"},{"key":"e_1_3_3_5_2","doi-asserted-by":"publisher","DOI":"10.2741\/highland"},{"key":"e_1_3_3_6_2","first-page":"38","article-title":"Characterization of Mannheimia haemolytica isolated from feedlot cattle that were healthy or treated for bovine respiratory disease","volume":"78","author":"Klima CL","year":"2014","unstructured":"Klima CL, Alexander TW, Hendrick S, McAllister TA. 2014. Characterization of Mannheimia haemolytica isolated from feedlot cattle that were healthy or treated for bovine respiratory disease. Can J Vet Res 78:38\u201345.","journal-title":"Can J Vet Res"},{"key":"e_1_3_3_7_2","unstructured":"Andrews S. 2010. FastQC: a quality control tool for high throughput sequence data. Available from: http:\/\/www.bioinformatics.babraham.ac.uk\/projects\/fastqc\/"},{"key":"e_1_3_3_8_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btu170"},{"key":"e_1_3_3_9_2","unstructured":"Wick R. 2018 Porechop: adapter trimmer for Oxford Nanopore reads. https:\/\/github.com\/rrwick\/Porechop."},{"key":"e_1_3_3_10_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-021-03626-9"},{"key":"e_1_3_3_11_2","unstructured":"Wick R. 2021 Filtlong: quality filtering tool for long reads. https:\/\/github.com\/rrwick\/Filtlong."},{"key":"e_1_3_3_12_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1005595"},{"key":"e_1_3_3_13_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btt086"},{"key":"e_1_3_3_14_2","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkw569"},{"key":"e_1_3_3_15_2","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-10-421"},{"key":"e_1_3_3_16_2","doi-asserted-by":"publisher","DOI":"10.1093\/jac\/dkaa345"},{"key":"e_1_3_3_17_2","doi-asserted-by":"publisher","DOI":"10.1128\/IAI.69.7.4458-4464.2001"}],"container-title":["Microbiology Resource Announcements"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/mra.00552-24","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/mra.00552-24","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,11,12]],"date-time":"2024-11-12T14:07:32Z","timestamp":1731420452000},"score":1,"resource":{"primary":{"URL":"https:\/\/journals.asm.org\/doi\/10.1128\/mra.00552-24"}},"subtitle":[],"editor":[{"given":"Julia A.","family":"Maresca","sequence":"additional","affiliation":[],"role":[{"role":"editor","vocabulary":"crossref"}]}],"short-title":[],"issued":{"date-parts":[[2024,11,12]]},"references-count":16,"journal-issue":{"issue":"11","published-print":{"date-parts":[[2024,11,12]]}},"alternative-id":["10.1128\/mra.00552-24"],"URL":"https:\/\/doi.org\/10.1128\/mra.00552-24","relation":{},"ISSN":["2576-098X"],"issn-type":[{"type":"electronic","value":"2576-098X"}],"subject":[],"published":{"date-parts":[[2024,11,12]]},"assertion":[{"value":"2024-05-23","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2024-08-16","order":2,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2024-10-14","order":3,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}],"article-number":"e00552-24"}}