{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,21]],"date-time":"2026-07-21T23:00:13Z","timestamp":1784674813275,"version":"3.55.0"},"reference-count":10,"publisher":"American Society for Microbiology","issue":"1","license":[{"start":{"date-parts":[[2024,1,17]],"date-time":"2024-01-17T00:00:00Z","timestamp":1705449600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2024,1,17]],"date-time":"2024-01-17T00:00:00Z","timestamp":1705449600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"funder":[{"DOI":"10.13039\/501100006367","name":"Association Instituts Carnot","doi-asserted-by":"crossref","award":["FIELD"],"award-info":[{"award-number":["FIELD"]}],"id":[{"id":"10.13039\/501100006367","id-type":"DOI","asserted-by":"crossref"}]}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["Microbiol Resour Announc"],"published-print":{"date-parts":[[2024,1,17]]},"abstract":"<jats:title>ABSTRACT<\/jats:title>\n          <jats:p>We report the whole-genome sequence of monkeypox virus obtained using MinION technology (Oxford Nanopore Technologies) from a French clinical specimen during the 2022 epidemic. Amplicon-based sequencing and shotgun metagenomic approaches were directly applied to the sample.<\/jats:p>","DOI":"10.1128\/mra.00811-23","type":"journal-article","created":{"date-parts":[[2023,12,4]],"date-time":"2023-12-04T14:00:24Z","timestamp":1701698424000},"update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":5,"title":["Direct metagenomic and amplicon-based Nanopore sequencing of French human monkeypox from clinical specimen"],"prefix":"10.1128","volume":"13","author":[{"given":"Aurelia","family":"Kwasiborski","sequence":"first","affiliation":[{"name":"Institut Pasteur, Universit\u00e9 Paris Cit\u00e9, Environment and Infectious Risks Unit, Laboratory for Urgent Response to Biological Threats , Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"V\u00e9ronique","family":"Hourdel","sequence":"additional","affiliation":[{"name":"Institut Pasteur, Universit\u00e9 Paris Cit\u00e9, Environment and Infectious Risks Unit, Laboratory for Urgent Response to Biological Threats , Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Charlotte","family":"Bali\u00e8re","sequence":"additional","affiliation":[{"name":"Institut Pasteur, Universit\u00e9 Paris Cit\u00e9, Environment and Infectious Risks Unit, Laboratory for Urgent Response to Biological Threats , Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Damien","family":"Hoinard","sequence":"additional","affiliation":[{"name":"Institut Pasteur, Universit\u00e9 Paris Cit\u00e9, Environment and Infectious Risks Unit, Laboratory for Urgent Response to Biological Threats , Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Quentin","family":"Grassin","sequence":"additional","affiliation":[{"name":"Institut Pasteur, Universit\u00e9 Paris Cit\u00e9, Environment and Infectious Risks Unit, Laboratory for Urgent Response to Biological Threats , Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Maxence","family":"Feher","sequence":"additional","affiliation":[{"name":"Institut Pasteur, Universit\u00e9 Paris Cit\u00e9, Environment and Infectious Risks Unit, Laboratory for Urgent Response to Biological Threats , Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Cl\u00e9mentine","family":"De La Porte Des Vaux","sequence":"additional","affiliation":[{"name":"Bichat-Claude Bernard Hospital , Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"M\u00e9lanie","family":"Cresta","sequence":"additional","affiliation":[{"name":"Bichat-Claude Bernard Hospital , Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jessica","family":"Vanhomwegen","sequence":"additional","affiliation":[{"name":"Institut Pasteur, Universit\u00e9 Paris Cit\u00e9, Environment and Infectious Risks Unit, Laboratory for Urgent Response to Biological Threats , Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jean-Claude","family":"Manuguerra","sequence":"additional","affiliation":[{"name":"Institut Pasteur, Universit\u00e9 Paris Cit\u00e9, Environment and Infectious Risks Unit, Laboratory for Urgent Response to Biological Threats , Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Christophe","family":"Bat\u00e9jat","sequence":"additional","affiliation":[{"name":"Institut Pasteur, Universit\u00e9 Paris Cit\u00e9, Environment and Infectious Risks Unit, Laboratory for Urgent Response to Biological Threats , Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8477-5708","authenticated-orcid":true,"given":"Val\u00e9rie","family":"Caro","sequence":"additional","affiliation":[{"name":"Institut Pasteur, Universit\u00e9 Paris Cit\u00e9, Environment and Infectious Risks Unit, Laboratory for Urgent Response to Biological Threats , Paris, France"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"235","reference":[{"key":"e_1_3_4_2_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41591-022-02036-2"},{"key":"e_1_3_4_3_2","unstructured":"Mpox (Monkeypox) outbreak. 2022. 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