{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,7]],"date-time":"2026-10-07T13:52:15Z","timestamp":1791381135914,"version":"4.3.3"},"reference-count":19,"publisher":"American Society for Microbiology","license":[{"start":{"date-parts":[[2026,10,7]],"date-time":"2026-10-07T00:00:00Z","timestamp":1791331200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2026,10,7]],"date-time":"2026-10-07T00:00:00Z","timestamp":1791331200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"funder":[{"name":"NMKL: Nordic-Baltic Committee on food analysis","award":["M18"],"award-info":[{"award-number":["M18"]}]}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["Microbiol Resour Announc"],"abstract":"<jats:title>ABSTRACT<\/jats:title>\n                  <jats:sec>\n                    <jats:title\/>\n                    <jats:p>\n                      <jats:italic toggle=\"yes\">Dermacoccus nishinomiyaensis<\/jats:italic>\n                      is an actinomycete whose isolation from diverse environments and potential for opportunistic pathogenicity have been documented. Here, we report the complete genome sequence of\n                      <jats:italic toggle=\"yes\">D. nishinomiyaensis<\/jats:italic>\n                      1-2, isolated from sushi. We provide annotation statistics and insights, such as the antiphage systems arsenal of the strain, including its methylome.\n                    <\/jats:p>\n                  <\/jats:sec>","DOI":"10.1128\/mra.00916-26","type":"journal-article","created":{"date-parts":[[2026,10,7]],"date-time":"2026-10-07T13:00:41Z","timestamp":1791378041000},"update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":0,"title":["Complete genome sequence and methylome analysis of\n                    <i>Dermacoccus nishinomiyaensis<\/i>\n                    strain 1-2 isolated from sushi"],"prefix":"10.1128","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-2805-4209","authenticated-orcid":true,"given":"Axel","family":"Soto-Serrano","sequence":"first","affiliation":[{"id":[{"id":"https:\/\/ror.org\/035b05819","id-type":"ROR","asserted-by":"publisher"}],"name":"Department of Food Science, Faculty of Science, University of Copenhagen","place":["Frederiksberg, Denmark"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lukasz","family":"Krych","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/035b05819","id-type":"ROR","asserted-by":"publisher"}],"name":"Department of Food Science, Faculty of Science, University of Copenhagen","place":["Frederiksberg, Denmark"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3536-5136","authenticated-orcid":true,"given":"J\u00f8rgen J.","family":"Leisner","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/035b05819","id-type":"ROR","asserted-by":"publisher"}],"name":"Department of Veterinary and Animal Sciences, Faculty of Health and Medical Sciences, University of Copenhagen","place":["Frederiksberg, Denmark"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"235","published-online":{"date-parts":[[2026,10,7]]},"reference":[{"key":"e_1_3_3_2_2","doi-asserted-by":"publisher","DOI":"10.1099\/00207713-45-4-682"},{"key":"e_1_3_3_3_2","doi-asserted-by":"publisher","DOI":"10.1099\/00207713-25-3-290"},{"key":"e_1_3_3_4_2","doi-asserted-by":"publisher","DOI":"10.1128\/genomeA.01652-16"},{"key":"e_1_3_3_5_2","doi-asserted-by":"publisher","DOI":"10.1128\/MRA.01370-19"},{"key":"e_1_3_3_6_2","doi-asserted-by":"publisher","DOI":"10.1046\/j.1472-765x.2000.00818.x"},{"key":"e_1_3_3_7_2","doi-asserted-by":"publisher","DOI":"10.1111\/mve.12054"},{"key":"e_1_3_3_8_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.cmi.2019.02.023"},{"key":"e_1_3_3_9_2","doi-asserted-by":"publisher","DOI":"10.1111\/hdi.70036"},{"key":"e_1_3_3_10_2","doi-asserted-by":"publisher","DOI":"10.1099\/mgen.0.001244"},{"key":"e_1_3_3_11_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41587-019-0072-8"},{"key":"e_1_3_3_12_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btad409"},{"key":"e_1_3_3_13_2","doi-asserted-by":"publisher","DOI":"10.21105\/joss.05968"},{"key":"e_1_3_3_14_2","doi-asserted-by":"publisher","DOI":"10.1101\/gr.186072.114"},{"key":"e_1_3_3_15_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btac672"},{"key":"e_1_3_3_16_2","doi-asserted-by":"publisher","DOI":"10.1099\/mgen.0.000685"},{"key":"e_1_3_3_17_2","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkac400"},{"key":"e_1_3_3_18_2","doi-asserted-by":"publisher","unstructured":"Heidelbach S M\u00f8lvang Dall S B\u00f8jer JS Nissen J van der Maas LNL Sereika M Kirkegaard RH Jensen SI Kousgaard SJ Thorlacius-Ussing O Hose K Nielsen TD Albertsen M. 2024. Nanomotif: leveraging DNA methylation motifs for genome recovery and host association of plasmids in metagenomes from complex microbial communities. bioRxiv. doi:10.1101\/2024.04.29.591623","DOI":"10.1101\/2024.04.29.591623"},{"key":"e_1_3_3_19_2","doi-asserted-by":"publisher","DOI":"10.1093\/gigascience\/giag062"},{"key":"e_1_3_3_20_2","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkae968"}],"container-title":["Microbiology Resource Announcements"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/mra.00916-26","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/mra.00916-26","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,10,7]],"date-time":"2026-10-07T13:00:42Z","timestamp":1791378042000},"score":1,"resource":{"primary":{"URL":"https:\/\/journals.asm.org\/doi\/10.1128\/mra.00916-26"}},"subtitle":[],"editor":[{"given":"Zhenjiang Zech","family":"Xu","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]}],"short-title":[],"issued":{"date-parts":[[2026,10,7]]},"references-count":19,"alternative-id":["10.1128\/mra.00916-26"],"URL":"https:\/\/doi.org\/10.1128\/mra.00916-26","relation":{},"ISSN":["2576-098X"],"issn-type":[{"value":"2576-098X","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,10,7]]},"assertion":[{"value":"2026-08-04","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2026-09-19","order":2,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2026-10-07","order":3,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}],"article-number":"e00916-26"}}