{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,26]],"date-time":"2026-09-26T09:23:43Z","timestamp":1790414623349,"version":"4.1.0"},"reference-count":24,"publisher":"American Society for Microbiology","issue":"3","license":[{"start":{"date-parts":[[2019,5,22]],"date-time":"2019-05-22T00:00:00Z","timestamp":1558483200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2019,6,26]],"date-time":"2019-06-26T00:00:00Z","timestamp":1561507200000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"funder":[{"DOI":"10.13039\/501100000923","name":"Department of Education and Training | Australian Research Council","doi-asserted-by":"publisher","id":[{"id":"10.13039\/501100000923","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["mSphere"],"published-print":{"date-parts":[[2019,6,26]]},"abstract":"<jats:p>\n            SGI1 and variants of it carry a variety of antimicrobial resistance genes, including those conferring resistance to extended-spectrum \u03b2-lactams and carbapenems, and have been found in diverse\n            <jats:named-content content-type=\"genus-species\">S. enterica<\/jats:named-content>\n            serovars,\n            <jats:named-content content-type=\"genus-species\">Acinetobacter baumannii<\/jats:named-content>\n            , and other members of the\n            <jats:named-content content-type=\"genus-species\">Enterobacteriaceae<\/jats:named-content>\n            . SGI1 integrates into Gram-negative pathogenic bacteria by targeting a conserved site 18\u2009bp from the 3\u2032 end of\n            <jats:italic>trmE<\/jats:italic>\n            . For the first time, we describe a novel variant of SGI1 in an avian pathogenic\n            <jats:named-content content-type=\"genus-species\">Escherichia coli<\/jats:named-content>\n            isolate. The presence of SGI1 in\n            <jats:named-content content-type=\"genus-species\">E. coli<\/jats:named-content>\n            is significant because it represents yet another lateral gene transfer mechanism to enhancing the capacity of\n            <jats:named-content content-type=\"genus-species\">E. coli<\/jats:named-content>\n            to acquire and propagate antimicrobial resistance and putative virulence genes. This finding underscores the importance of whole-genome sequencing (WGS) to microbial genomic epidemiology, particularly within a One Health context. Further studies are needed to determine how widespread SGI1 and variants of it may be in Australia.\n          <\/jats:p>","DOI":"10.1128\/msphere.00169-19","type":"journal-article","created":{"date-parts":[[2019,5,21]],"date-time":"2019-05-21T13:42:50Z","timestamp":1558446170000},"update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":18,"title":["<i>Salmonella<\/i>\n            Genomic Island 1B Variant Found in a Sequence Type 117 Avian Pathogenic Escherichia coli Isolate"],"prefix":"10.1128","volume":"4","author":[{"given":"Max Laurence","family":"Cummins","sequence":"first","affiliation":[{"name":"The ithree institute, University of Technology Sydney, Ultimo, New South Wales, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Piklu","family":"Roy Chowdhury","sequence":"additional","affiliation":[{"name":"The ithree institute, University of Technology Sydney, Ultimo, New South Wales, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Marc Serge","family":"Marenda","sequence":"additional","affiliation":[{"name":"Asia-Pacific Centre for Animal Health, Department of Veterinary Biosciences, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Werribee, Victoria, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0903-2469","authenticated-orcid":false,"given":"Glenn Francis","family":"Browning","sequence":"additional","affiliation":[{"name":"Asia-Pacific Centre for Animal Health, Department of Veterinary Biosciences, Faculty of Veterinary and Agricultural Sciences, The University of Melbourne, Parkville, Victoria, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Steven Philip","family":"Djordjevic","sequence":"additional","affiliation":[{"name":"The ithree institute, University of Technology Sydney, Ultimo, New South Wales, Australia"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"235","reference":[{"key":"e_1_3_2_2_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2958.2005.04520.x"},{"key":"e_1_3_2_3_2","doi-asserted-by":"publisher","DOI":"10.1038\/srep32285"},{"key":"e_1_3_2_4_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1574-6968.1999.tb13381.x"},{"key":"e_1_3_2_5_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pgen.1004714"},{"key":"e_1_3_2_6_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0032497"},{"key":"e_1_3_2_7_2","doi-asserted-by":"publisher","DOI":"10.2217\/fmb.10.122"},{"key":"e_1_3_2_8_2","doi-asserted-by":"publisher","DOI":"10.1093\/jac\/dkn500"},{"key":"e_1_3_2_9_2","doi-asserted-by":"publisher","DOI":"10.1093\/jac\/dkl540"},{"key":"e_1_3_2_10_2","doi-asserted-by":"publisher","DOI":"10.1093\/jac\/dkw151"},{"key":"e_1_3_2_11_2","doi-asserted-by":"publisher","DOI":"10.1128\/mSphere.00118-17"},{"key":"e_1_3_2_12_2","doi-asserted-by":"publisher","DOI":"10.1093\/jac\/dkh192"},{"key":"e_1_3_2_13_2","doi-asserted-by":"publisher","DOI":"10.1128\/JB.187.13.4401-4409.2005"},{"key":"e_1_3_2_14_2","doi-asserted-by":"publisher","DOI":"10.1128\/AAC.01229-06"},{"key":"e_1_3_2_15_2","doi-asserted-by":"publisher","DOI":"10.1128\/AAC.01532-08"},{"key":"e_1_3_2_16_2","doi-asserted-by":"publisher","DOI":"10.1093\/jac\/dkr335"},{"key":"e_1_3_2_17_2","doi-asserted-by":"publisher","DOI":"10.1093\/jac\/dkt100"},{"key":"e_1_3_2_18_2","doi-asserted-by":"publisher","DOI":"10.1093\/jac\/dkv137"},{"key":"e_1_3_2_19_2","doi-asserted-by":"publisher","DOI":"10.1093\/jac\/dky442"},{"key":"e_1_3_2_20_2","doi-asserted-by":"publisher","DOI":"10.1128\/AAC.01793-18"},{"key":"e_1_3_2_21_2","doi-asserted-by":"publisher","DOI":"10.1099\/mgen.0.000250"},{"key":"e_1_3_2_22_2","doi-asserted-by":"publisher","DOI":"10.1093\/cid\/cis502"},{"key":"e_1_3_2_23_2","doi-asserted-by":"crossref","unstructured":"Bradley P den Bakker H Rocha E McVean G Iqbal Z. 2017. 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