{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,7,30]],"date-time":"2026-07-30T12:44:48Z","timestamp":1785415488479,"version":"3.56.0"},"reference-count":41,"publisher":"American Society for Microbiology","issue":"1","license":[{"start":{"date-parts":[[2026,1,6]],"date-time":"2026-01-06T00:00:00Z","timestamp":1767657600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2026,1,6]],"date-time":"2026-01-06T00:00:00Z","timestamp":1767657600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"funder":[{"name":"Fundamental Research Program of Shanxi Province, China","award":["202403021221169"],"award-info":[{"award-number":["202403021221169"]}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["31971551"],"award-info":[{"award-number":["31971551"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]},{"name":"Local Science and Technology Development Guided by the Central Government in Shanxi Province, China","award":["YDZJSX2022A055"],"award-info":[{"award-number":["YDZJSX2022A055"]}]},{"name":"Postgraduate Academic Innovation Project of Shanxi Province","award":["2025XS361"],"award-info":[{"award-number":["2025XS361"]}]}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["Microbiol Spectr"],"published-print":{"date-parts":[[2026,1,6]]},"abstract":"<jats:title>ABSTRACT<\/jats:title>\n                  <jats:sec>\n                    <jats:title\/>\n                    <jats:p>\n                      Lead is considered a main pollutant that is found in air, soil, and water, which is a dangerous waste and extremely toxic to any living organism. The use of micro-organisms is the most successful approach to remediate heavy metals from the environment due to their efficacy and financial viability.\n                      <jats:italic toggle=\"yes\">Shigella<\/jats:italic>\n                      sp. D5 was isolated from a mining soil, which was found to be well capable of removing the heavy metal Pb(II). In the present research, biosorption of Pb(II) from aqueous solution via D5 living mass was described. Factors affecting biosorption efficiency, such as adsorbent dose, initial lead concentration, temperature, pH, and contact time, were investigated. The optimum levels of pH, initial Pb(II) concentration, temperature, and contact time were 7, 200 mg\/L, 35\u00b0C, and 24 h, respectively. Under the optimized adsorption conditions, the removal rate of lead reached 82% when the initial concentration of lead was 50 mg\/L. Both Langmuir and Freundlich isotherm models were fitted well with the equilibrium experimental data. The kinetic results showed that the sorption data closely followed a pseudo-second-order kinetic model. The micro-adsorption mechanism of Pb(II) was investigated by SEM, FTIR, XRD, and XPS techniques. It demonstrated that the anionic components like phosphate, oxhydryl, and chloride groups can remove Pb(II) through strong surface complexation and electrostatic attraction for D5. The strain D5 could transfer lead ions into highly insoluble compounds Pb\n                      <jats:sub>5<\/jats:sub>\n                      (PO\n                      <jats:sub>4<\/jats:sub>\n                      )\n                      <jats:sub>3<\/jats:sub>\n                      OH and Pb\n                      <jats:sub>5<\/jats:sub>\n                      (PO\n                      <jats:sub>4<\/jats:sub>\n                      )\n                      <jats:sub>3<\/jats:sub>\n                      Cl on the bacteria surfaces. All results indicated that it was feasible to effectively remove Pb(II) by using the\n                      <jats:italic toggle=\"yes\">Shigella<\/jats:italic>\n                      sp. D5. This study elucidates the adsorption properties and resistance mechanism of\n                      <jats:italic toggle=\"yes\">Shigella<\/jats:italic>\n                      for Pb(II).\n                    <\/jats:p>\n                    <jats:sec>\n                      <jats:title>IMPORTANCE<\/jats:title>\n                      <jats:p>\n                        Microbially mediated remediation is a promising approach for heavy metal pollution control due to its cost-effectiveness, environmental compatibility, and adaptability. Understanding the mechanisms of microbial adsorption and resistance to heavy metal is critical for guiding practical bioremediation efforts. In this study, we isolated a highly lead-resistant\n                        <jats:italic toggle=\"yes\">Shigella<\/jats:italic>\n                        sp. D5 from coal mine-contaminated soil. Although\n                        <jats:italic toggle=\"yes\">Shigella<\/jats:italic>\n                        are frequently detected in heavy metal-polluted environments, their adsorption capacities and the resistance mechanism to Pb(II) remain poorly characterized. Our findings advance the understanding of microbial strategy for heavy metal remediation and highlight their role in heavy metal mineralization processes.\n                      <\/jats:p>\n                    <\/jats:sec>\n                  <\/jats:sec>","DOI":"10.1128\/spectrum.01255-25","type":"journal-article","created":{"date-parts":[[2025,12,2]],"date-time":"2025-12-02T14:00:11Z","timestamp":1764684011000},"update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":0,"title":["Unraveling the resistance mechanism for\n                    <i>Shigella<\/i>\n                    under stress of heavy metal Pb(II)"],"prefix":"10.1128","volume":"14","author":[{"ORCID":"https:\/\/orcid.org\/0000-0002-0418-8106","authenticated-orcid":false,"given":"Lihong","family":"Zhang","sequence":"first","affiliation":[{"id":[{"id":"https:\/\/ror.org\/03zd3ta61","id-type":"ROR","asserted-by":"publisher"}],"name":"School of Life Science, Shanxi Engineering Research Center of Microbial Application Technologies, Shanxi Normal University","place":["Taiyuan, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Baoyan","family":"Guo","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/03zd3ta61","id-type":"ROR","asserted-by":"publisher"}],"name":"School of Life Science, Shanxi Engineering Research Center of Microbial Application Technologies, Shanxi Normal University","place":["Taiyuan, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Yingjie","family":"Li","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/03zd3ta61","id-type":"ROR","asserted-by":"publisher"}],"name":"School of Life Science, Shanxi Engineering Research Center of Microbial Application Technologies, Shanxi Normal University","place":["Taiyuan, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Bingying","family":"Chen","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/03zd3ta61","id-type":"ROR","asserted-by":"publisher"}],"name":"School of Life Science, Shanxi Engineering Research Center of Microbial Application Technologies, Shanxi Normal University","place":["Taiyuan, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-0456-6816","authenticated-orcid":true,"given":"Xueyong","family":"Zhou","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/03zd3ta61","id-type":"ROR","asserted-by":"publisher"}],"name":"School of Life Science, Shanxi Engineering Research Center of Microbial Application Technologies, Shanxi Normal University","place":["Taiyuan, China"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"235","reference":[{"key":"e_1_3_4_2_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.jhazmat.2022.130391"},{"key":"e_1_3_4_3_2","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-7643-8340-4_6"},{"key":"e_1_3_4_4_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.ecoenv.2018.05.080"},{"key":"e_1_3_4_5_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-020-66025-6"},{"key":"e_1_3_4_6_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.etap.2019.03.010"},{"key":"e_1_3_4_7_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.ecoenv.2024.116388"},{"key":"e_1_3_4_8_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.scitotenv.2023.165009"},{"key":"e_1_3_4_9_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.indic.2023.100224"},{"key":"e_1_3_4_10_2","doi-asserted-by":"publisher","DOI":"10.1007\/s10661-023-11352-0"},{"key":"e_1_3_4_11_2","doi-asserted-by":"publisher","DOI":"10.1007\/s00203-022-03127-x"},{"key":"e_1_3_4_12_2","doi-asserted-by":"publisher","DOI":"10.3390\/foods11182728"},{"key":"e_1_3_4_13_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.envint.2021.106851"},{"key":"e_1_3_4_14_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.egg.2020.100054"},{"key":"e_1_3_4_15_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.envint.2019.105351"},{"key":"e_1_3_4_16_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.heliyon.2019.e01771"},{"key":"e_1_3_4_17_2","doi-asserted-by":"publisher","DOI":"10.3390\/ijerph15091970"},{"key":"e_1_3_4_18_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.jgar.2017.05.012"},{"key":"e_1_3_4_19_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.sjbs.2020.06.002"},{"key":"e_1_3_4_20_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.jhazmat.2020.123175"},{"key":"e_1_3_4_21_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.jenvman.2023.117947"},{"key":"e_1_3_4_22_2","doi-asserted-by":"publisher","DOI":"10.1186\/s13568-023-01519-w"},{"key":"e_1_3_4_23_2","volume-title":"Metodos de laboratorio en microbiologia","author":"Harrigan WF","year":"1968","unstructured":"Harrigan WF, Maccance ME, Acha IG, Villanueva JR. 1968. Metodos de laboratorio en microbiologia. Editorial Academia, Leon."},{"key":"e_1_3_4_24_2","first-page":"409","volume-title":"Manual of methods for general bacteriology","author":"Smibert R","year":"1981","unstructured":"Smibert R, Krieg N. 1981. General characterization, p 409\u2013442. In Manual of methods for general bacteriology. American Society for Microbiology, Washington, DC."},{"key":"e_1_3_4_25_2","doi-asserted-by":"publisher","DOI":"10.1046\/j.1472-765x.2000.00664.x"},{"key":"e_1_3_4_26_2","doi-asserted-by":"publisher","DOI":"10.1093\/molbev\/msr121"},{"key":"e_1_3_4_27_2","doi-asserted-by":"publisher","DOI":"10.1093\/oxfordjournals.molbev.a040454"},{"key":"e_1_3_4_28_2","doi-asserted-by":"publisher","DOI":"10.3390\/toxics10060291"},{"key":"e_1_3_4_29_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.jhazmat.2007.01.021"},{"key":"e_1_3_4_30_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.cej.2010.12.014"},{"key":"e_1_3_4_31_2","doi-asserted-by":"publisher","DOI":"10.3390\/microorganisms8060807"},{"key":"e_1_3_4_32_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.cej.2016.10.017"},{"key":"e_1_3_4_33_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.desal.2005.11.025"},{"key":"e_1_3_4_34_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.bcab.2021.102183"},{"key":"e_1_3_4_35_2","doi-asserted-by":"publisher","DOI":"10.7554\/eLife.47033"},{"key":"e_1_3_4_36_2","first-page":"10815","volume-title":"Encyclopedia of analytical chemistry","author":"Meyers RA","year":"2000","unstructured":"Meyers RA. 2000. Interpretation of infrared spectra, a practical approach, p 10815\u201310837. In Encyclopedia of analytical chemistry. John Wiley, Sons Ltd, Chichester."},{"key":"e_1_3_4_37_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.scitotenv.2023.161628"},{"key":"e_1_3_4_38_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.jhazmat.2021.126975"},{"key":"e_1_3_4_39_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.envpol.2016.05.080"},{"key":"e_1_3_4_40_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.scitotenv.2023.161685"},{"key":"e_1_3_4_41_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.biortech.2022.127569"},{"key":"e_1_3_4_42_2","doi-asserted-by":"publisher","DOI":"10.1007\/s11356-022-19880-x"}],"container-title":["Microbiology Spectrum"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/spectrum.01255-25","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/spectrum.01255-25","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,1,6]],"date-time":"2026-01-06T14:05:00Z","timestamp":1767708300000},"score":1,"resource":{"primary":{"URL":"https:\/\/journals.asm.org\/doi\/10.1128\/spectrum.01255-25"}},"subtitle":[],"editor":[{"given":"Gabriella","family":"Fiorentino","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]}],"short-title":[],"issued":{"date-parts":[[2026,1,6]]},"references-count":41,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2026,1,6]]}},"alternative-id":["10.1128\/spectrum.01255-25"],"URL":"https:\/\/doi.org\/10.1128\/spectrum.01255-25","relation":{},"ISSN":["2165-0497"],"issn-type":[{"value":"2165-0497","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,1,6]]},"assertion":[{"value":"2025-04-29","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2025-10-20","order":2,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2025-12-02","order":3,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}],"article-number":"e01255-25"}}