{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,9,10]],"date-time":"2026-09-10T14:36:22Z","timestamp":1789050982152,"version":"build-2803163510"},"reference-count":59,"publisher":"American Society for Microbiology","issue":"1","license":[{"start":{"date-parts":[[2026,1,6]],"date-time":"2026-01-06T00:00:00Z","timestamp":1767657600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2026,1,6]],"date-time":"2026-01-06T00:00:00Z","timestamp":1767657600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["Microbiol Spectr"],"published-print":{"date-parts":[[2026,1,6]]},"abstract":"<jats:title>ABSTRACT<\/jats:title>\n                  <jats:sec>\n                    <jats:title\/>\n                    <jats:p>\n                      Salmonellosis and shigellosis remain major global health concerns, with\n                      <jats:italic toggle=\"yes\">Salmonella<\/jats:italic>\n                      Typhimurium and\n                      <jats:italic toggle=\"yes\">Shigella flexneri<\/jats:italic>\n                      classified as high-priority antibiotic-resistant pathogens by the World Health Organization. The development of new antibiotics is slow and challenging, underscoring the need for alternative therapeutic strategies. One promising approach involves leveraging gut microbiota-derived bacteria that confer colonization resistance against enteric pathogens. In this study, we screened a human gut microbiota culture collection and identified\n                      <jats:italic toggle=\"yes\">Bifidobacterium longum<\/jats:italic>\n                      as the most effective species in inhibiting\n                      <jats:italic toggle=\"yes\">S<\/jats:italic>\n                      . Typhimurium and\n                      <jats:italic toggle=\"yes\">S. flexneri in vitro<\/jats:italic>\n                      . To evaluate its protective potential\n                      <jats:italic toggle=\"yes\">in vivo<\/jats:italic>\n                      , we utilized\n                      <jats:italic toggle=\"yes\">Caenorhabditis elegans<\/jats:italic>\n                      as a model system. Our findings demonstrate that\n                      <jats:italic toggle=\"yes\">B. longum<\/jats:italic>\n                      significantly reduced pathogen burden and enhanced host survival following infection. Mechanistic analysis revealed that\n                      <jats:italic toggle=\"yes\">B. longum<\/jats:italic>\n                      inhibits\n                      <jats:italic toggle=\"yes\">S<\/jats:italic>\n                      . Typhimurium primarily through acidification, while\n                      <jats:italic toggle=\"yes\">S. flexneri<\/jats:italic>\n                      suppression appears to involve a protein-mediated or heat-stable metabolite-dependent mechanism. Additionally,\n                      <jats:italic toggle=\"yes\">B. longum<\/jats:italic>\n                      modulated host immune pathways, downregulating genes associated with the p38 MAPK and insulin\/IGF-1 signaling pathways. These results highlight the potential of\n                      <jats:italic toggle=\"yes\">B. longum<\/jats:italic>\n                      as a non-antibiotic therapeutic for controlling\n                      <jats:italic toggle=\"yes\">Salmonella<\/jats:italic>\n                      and\n                      <jats:italic toggle=\"yes\">Shigella<\/jats:italic>\n                      infections. However, further validation in mammalian models is required to assess its clinical relevance.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>IMPORTANCE<\/jats:title>\n                    <jats:p>\n                      Gut infections caused by\n                      <jats:italic toggle=\"yes\">Salmonella<\/jats:italic>\n                      and\n                      <jats:italic toggle=\"yes\">Shigella<\/jats:italic>\n                      are major global health threats. As an alternative to novel drug discovery, which is time-consuming and faces several challenges, this study explores the potential of gut bacteria to protect against these pathogens. We identified\n                      <jats:italic toggle=\"yes\">Bifidobacterium longum<\/jats:italic>\n                      , a common gut microbe, which can significantly reduce infection by both\n                      <jats:italic toggle=\"yes\">Salmonella<\/jats:italic>\n                      and\n                      <jats:italic toggle=\"yes\">Shigella<\/jats:italic>\n                      in a lab setting and in a simple animal model. The bacterium functions by creating an environment that is hostile to pathogens and by modulating the host\u2019s immune responses. These findings suggest that\n                      <jats:italic toggle=\"yes\">B. longum<\/jats:italic>\n                      could be developed as a natural, non-antibiotic treatment to control or reduce these enteric pathogen infections. This approach opens the door to using probiotics as effective tools in the global fight against antibiotic resistance.\n                    <\/jats:p>\n                  <\/jats:sec>","DOI":"10.1128\/spectrum.01842-25","type":"journal-article","created":{"date-parts":[[2025,12,5]],"date-time":"2025-12-05T11:03:11Z","timestamp":1764932591000},"update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":2,"title":["Gut commensal\n                    <i>Bifidobacterium longum<\/i>\n                    confers resistance to\n                    <i>Salmonella<\/i>\n                    Typhimurium and\n                    <i>Shigella flexneri<\/i>\n                    in a\n                    <i>Caenorhabditis elegans<\/i>\n                    model"],"prefix":"10.1128","volume":"14","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-6730-5712","authenticated-orcid":true,"given":"Phurt","family":"Harnvoravongchai","sequence":"first","affiliation":[{"id":[{"id":"https:\/\/ror.org\/01znkr924","id-type":"ROR","asserted-by":"publisher"}],"name":"Department of Biology, Faculty of Science, Mahidol University","place":["Bangkok, Thailand"]},{"id":[{"id":"https:\/\/ror.org\/01g9vbr38","id-type":"ROR","asserted-by":"publisher"}],"name":"Department of Veterinary Pathobiology, Oklahoma State University","place":["Stillwater, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Samara Paula","family":"Mattiello","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/015jmes13","id-type":"ROR","asserted-by":"publisher"}],"name":"Department of Veterinary and Biomedical Sciences, South Dakota State University","place":["Brookings, USA"]},{"id":[{"id":"https:\/\/ror.org\/020f3ap87","id-type":"ROR","asserted-by":"publisher"}],"name":"School of Mathematics and Sciences, University of Tennessee Southern","place":["Pulaski, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Achuthan","family":"Amabat","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/01g9vbr38","id-type":"ROR","asserted-by":"publisher"}],"name":"Department of Veterinary Pathobiology, Oklahoma State University","place":["Stillwater, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6666-4887","authenticated-orcid":true,"given":"Jusail","family":"C. P.","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/015jmes13","id-type":"ROR","asserted-by":"publisher"}],"name":"Department of Veterinary and Biomedical Sciences, South Dakota State University","place":["Brookings, USA"]},{"id":[{"id":"https:\/\/ror.org\/00f6a9h42","id-type":"ROR","asserted-by":"publisher"}],"name":"Laboratory of Vaccine Immunology, National Institute of Animal Biotechnology","place":["Hyderabad, India"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-8736-5170","authenticated-orcid":true,"given":"Syed M.","family":"Faisal","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/00f6a9h42","id-type":"ROR","asserted-by":"publisher"}],"name":"Laboratory of Vaccine Immunology, National Institute of Animal Biotechnology","place":["Hyderabad, India"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Radhey S.","family":"Kaushik","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/015jmes13","id-type":"ROR","asserted-by":"publisher"}],"name":"Department of Biology and Microbiology, South Dakota State University","place":["Brookings, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-5299-8074","authenticated-orcid":true,"given":"Joy","family":"Scaria","sequence":"additional","affiliation":[{"id":[{"id":"https:\/\/ror.org\/01g9vbr38","id-type":"ROR","asserted-by":"publisher"}],"name":"Department of Veterinary Pathobiology, Oklahoma State University","place":["Stillwater, USA"]},{"id":[{"id":"https:\/\/ror.org\/015jmes13","id-type":"ROR","asserted-by":"publisher"}],"name":"Department of Veterinary and Biomedical Sciences, South Dakota State University","place":["Brookings, USA"]}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"235","reference":[{"key":"e_1_3_3_2_2","doi-asserted-by":"publisher","DOI":"10.1016\/S1473-3099(25)00118-5"},{"key":"e_1_3_3_3_2","volume-title":"2021 antibacterial agents in clinical and preclinical development: an overview and analysis","author":"Organization WHO","year":"2022","unstructured":"Organization WHO. 2022. 2021 antibacterial agents in clinical and preclinical development: an overview and analysis. World Health Organization."},{"key":"e_1_3_3_4_2","doi-asserted-by":"publisher","DOI":"10.1017\/s0022172400021653"},{"key":"e_1_3_3_5_2","doi-asserted-by":"publisher","DOI":"10.1258\/002367784780891253"},{"key":"e_1_3_3_6_2","doi-asserted-by":"publisher","DOI":"10.1086\/428090"},{"key":"e_1_3_3_7_2","doi-asserted-by":"publisher","DOI":"10.1128\/iai.56.10.2610-2614.1988"},{"key":"e_1_3_3_8_2","doi-asserted-by":"publisher","DOI":"10.1099\/mic.0.001377"},{"key":"e_1_3_3_9_2","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2022.929346"},{"key":"e_1_3_3_10_2","doi-asserted-by":"publisher","DOI":"10.1128\/mBio.01346-15"},{"key":"e_1_3_3_11_2","doi-asserted-by":"publisher","DOI":"10.1007\/82_2011_192"},{"key":"e_1_3_3_12_2","doi-asserted-by":"publisher","DOI":"10.1053\/j.gastro.2011.07.013"},{"key":"e_1_3_3_13_2","doi-asserted-by":"publisher","DOI":"10.1038\/nmicrobiol.2017.75"},{"key":"e_1_3_3_14_2","doi-asserted-by":"publisher","DOI":"10.1128\/cmr.00060-22"},{"key":"e_1_3_3_15_2","doi-asserted-by":"publisher","DOI":"10.1128\/MMBR.00007-19"},{"key":"e_1_3_3_16_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1002606"},{"key":"e_1_3_3_17_2","doi-asserted-by":"publisher","DOI":"10.1038\/nrgastro.2016.189"},{"key":"e_1_3_3_18_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41579-018-0041-0"},{"key":"e_1_3_3_19_2","doi-asserted-by":"publisher","DOI":"10.1093\/femsec\/fiaa022"},{"key":"e_1_3_3_20_2","doi-asserted-by":"publisher","DOI":"10.1038\/srep07174"},{"key":"e_1_3_3_21_2","doi-asserted-by":"publisher","DOI":"10.1128\/mSystems.00620-19"},{"key":"e_1_3_3_22_2","doi-asserted-by":"publisher","DOI":"10.3390\/antibiotics13010076"},{"key":"e_1_3_3_23_2","doi-asserted-by":"publisher","DOI":"10.1086\/650733"},{"key":"e_1_3_3_24_2","doi-asserted-by":"publisher","DOI":"10.18502\/ijm.v11i1.702"},{"key":"e_1_3_3_25_2","first-page":"1","article-title":"Non-typhoidal salmonellosis: detection of genes responsible for virulence-A hospital based study from Manipal, India","volume":"11","author":"Bangera SR","year":"2022","unstructured":"BangeraSR, UmakanthS, ChowdhuryG, SahaRN, BallalM. 2022. Non-typhoidal salmonellosis: detection of genes responsible for virulence-A hospital based study from Manipal, India. J Krishna Inst Med Sci Univ 11:1\u201311.","journal-title":"J Krishna Inst Med Sci Univ"},{"key":"e_1_3_3_26_2","first-page":"651","article-title":"Global burden of Shigella infections: implications for vaccine development and implementation of control strategies","volume":"77","author":"Kotloff KL","year":"1999","unstructured":"Kotloff KL, Winickoff JP, Ivanoff B, Clemens JD, Swerdlow DL, Sansonetti PJ, Adak GK, Levine MM. 1999. Global burden of Shigella infections: implications for vaccine development and implementation of control strategies. Bull World Health Organ 77:651\u2013666.","journal-title":"Bull World Health Organ"},{"key":"e_1_3_3_27_2","doi-asserted-by":"publisher","DOI":"10.1093\/oso\/9780197570944.001.0001"},{"key":"e_1_3_3_28_2","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.01403-10"},{"key":"e_1_3_3_29_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.bbrc.2006.05.168"},{"key":"e_1_3_3_30_2","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.72.2.1700-1701.2006"},{"key":"e_1_3_3_31_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2958.2005.04739.x"},{"key":"e_1_3_3_32_2","doi-asserted-by":"publisher","DOI":"10.1016\/s0960-9822(00)00833-2"},{"key":"e_1_3_3_33_2","volume-title":"Caenorhabditis elegans: cell biology and physiology","author":"Rothman JH","year":"2012","unstructured":"Rothman JH, Andrew S. 2012. Edited by J. H. Rothman and A. Singson. Caenorhabditis elegans: cell biology and physiology. 2nd ed. Academic Press, Waltham, MA.","edition":"2"},{"key":"e_1_3_3_34_2","doi-asserted-by":"publisher","DOI":"10.1126\/science.aad9382"},{"key":"e_1_3_3_35_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.cell.2015.11.032"},{"key":"e_1_3_3_36_2","doi-asserted-by":"publisher","DOI":"10.4049\/jimmunol.1403169"},{"key":"e_1_3_3_37_2","doi-asserted-by":"publisher","unstructured":"Ambat A Valappil VT Ghimire S Harnvoravongchai P Mishra S Pillai VV Kashyap P Scaria J. 2024. A Caenorhabditis elegans based system for high-throughput functional phenotyping of human gut microbiota. bioRxiv. doi:10.1101\/2024.02.27.582212","DOI":"10.1101\/2024.02.27.582212"},{"key":"e_1_3_3_38_2","doi-asserted-by":"publisher","DOI":"10.1038\/nature18849"},{"key":"e_1_3_3_39_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.tim.2018.08.005"},{"key":"e_1_3_3_40_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2014.11.005"},{"key":"e_1_3_3_41_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1002995"},{"key":"e_1_3_3_42_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.mib.2013.06.009"},{"key":"e_1_3_3_43_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.carbpol.2024.122577"},{"key":"e_1_3_3_44_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.biotechadv.2013.01.010"},{"key":"e_1_3_3_45_2","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.01323-17"},{"key":"e_1_3_3_46_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.freeradbiomed.2023.03.026"},{"key":"e_1_3_3_47_2","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2017.00485"},{"key":"e_1_3_3_48_2","doi-asserted-by":"publisher","DOI":"10.1007\/s11357-023-00901-7"},{"key":"e_1_3_3_49_2","doi-asserted-by":"publisher","DOI":"10.3390\/pathogens12060848"},{"key":"e_1_3_3_50_2","doi-asserted-by":"publisher","DOI":"10.1002\/wdev.139"},{"key":"e_1_3_3_51_2","doi-asserted-by":"publisher","DOI":"10.1201\/9781315120171-1"},{"key":"e_1_3_3_52_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0106085"},{"key":"e_1_3_3_53_2","doi-asserted-by":"publisher","DOI":"10.1016\/s0960-9822(02)01396-9"},{"key":"e_1_3_3_54_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0813319106"},{"key":"e_1_3_3_55_2","doi-asserted-by":"publisher","DOI":"10.1038\/sj.embor.7401104"},{"key":"e_1_3_3_56_2","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2180-12-49"},{"key":"e_1_3_3_57_2","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0403546101"},{"key":"e_1_3_3_58_2","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-023-40317-7"},{"key":"e_1_3_3_59_2","doi-asserted-by":"publisher","DOI":"10.3389\/fvets.2019.00502"},{"key":"e_1_3_3_60_2","doi-asserted-by":"publisher","DOI":"10.1038\/s42003-021-01764-4"}],"container-title":["Microbiology Spectrum"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/spectrum.01842-25","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/spectrum.01842-25","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,1,6]],"date-time":"2026-01-06T14:06:39Z","timestamp":1767708399000},"score":1,"resource":{"primary":{"URL":"https:\/\/journals.asm.org\/doi\/10.1128\/spectrum.01842-25"}},"subtitle":[],"editor":[{"given":"Yuan Pin","family":"Hung","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"editor"}]}],"short-title":[],"issued":{"date-parts":[[2026,1,6]]},"references-count":59,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2026,1,6]]}},"alternative-id":["10.1128\/spectrum.01842-25"],"URL":"https:\/\/doi.org\/10.1128\/spectrum.01842-25","relation":{},"ISSN":["2165-0497"],"issn-type":[{"value":"2165-0497","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,1,6]]},"assertion":[{"value":"2025-06-13","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2025-11-10","order":2,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2025-12-05","order":3,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}],"article-number":"e01842-25"}}