{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,25]],"date-time":"2026-03-25T04:30:22Z","timestamp":1774413022723,"version":"3.50.1"},"reference-count":28,"publisher":"American Society for Microbiology","issue":"6","license":[{"start":{"date-parts":[[2022,12,21]],"date-time":"2022-12-21T00:00:00Z","timestamp":1671580800000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"},{"start":{"date-parts":[[2022,12,21]],"date-time":"2022-12-21T00:00:00Z","timestamp":1671580800000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.asm.org\/non-commercial-tdm-license"}],"funder":[{"DOI":"10.13039\/501100002347","name":"Bundesministerium f\u00fcr Bildung und Forschung","doi-asserted-by":"publisher","award":["BMBF grant number: 81203616"],"award-info":[{"award-number":["BMBF grant number: 81203616"]}],"id":[{"id":"10.13039\/501100002347","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/100010269","name":"Wellcome Trust","doi-asserted-by":"publisher","award":["106914\/Z\/15\/Z"],"award-info":[{"award-number":["106914\/Z\/15\/Z"]}],"id":[{"id":"10.13039\/100010269","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["journals.asm.org"],"crossmark-restriction":true},"short-container-title":["Microbiol Spectr"],"published-print":{"date-parts":[[2022,12,21]]},"abstract":"<jats:p>\n            Challenges in the diagnosis and treatment of invasive\n            <jats:named-content content-type=\"genus-species\">Salmonella<\/jats:named-content>\n            Enteritidis bloodstream infections in sub-Saharan Africa are responsible for a case fatality rate of approximately 15%. It is important to identify distinct clades of\n            <jats:named-content content-type=\"genus-species\">S.<\/jats:named-content>\n            Enteritidis in diagnostic laboratories in the African setting to determine the different health outcomes associated with particular outbreaks.\n          <\/jats:p>","DOI":"10.1128\/spectrum.03182-22","type":"journal-article","created":{"date-parts":[[2022,11,21]],"date-time":"2022-11-21T14:00:15Z","timestamp":1669039215000},"update-policy":"https:\/\/doi.org\/10.1128\/asmj-crossmark-policy-page","source":"Crossref","is-referenced-by-count":9,"title":["Multiplex PCR Assay for Clade Typing of Salmonella enterica Serovar Enteritidis"],"prefix":"10.1128","volume":"10","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-8938-1628","authenticated-orcid":true,"given":"Sarah","family":"Gallichan","sequence":"first","affiliation":[{"name":"Centre for Enteric Diseases, National Institute for Communicable Diseases (NICD), Johannesburg, South Africa"},{"name":"Department of Clinical Microbiology and Infectious Diseases, School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa"},{"name":"Department of Clinical Sciences, Liverpool School of Tropical Medicine, Liverpool, United Kingdom"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Blanca M.","family":"Perez-Sepulveda","sequence":"additional","affiliation":[{"name":"Clinical Infection, Microbiology &amp; Immunology, Institute of Infection, Veterinary &amp; Ecological Sciences (IVES), University of Liverpool, Liverpool, United Kingdom"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Nicholas A.","family":"Feasey","sequence":"additional","affiliation":[{"name":"Department of Clinical Sciences, Liverpool School of Tropical Medicine, Liverpool, United Kingdom"},{"name":"Malawi Liverpool Wellcome Research Programme, Kamuzu University of Health Sciences, Blantyre, Malawi"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jay C. D.","family":"Hinton","sequence":"additional","affiliation":[{"name":"Clinical Infection, Microbiology &amp; Immunology, Institute of Infection, Veterinary &amp; Ecological Sciences (IVES), University of Liverpool, Liverpool, United Kingdom"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Juno","family":"Thomas","sequence":"additional","affiliation":[{"name":"Centre for Enteric Diseases, National Institute for Communicable Diseases (NICD), Johannesburg, South Africa"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Anthony Marius","family":"Smith","sequence":"additional","affiliation":[{"name":"Centre for Enteric Diseases, National Institute for Communicable Diseases (NICD), Johannesburg, South Africa"},{"name":"Department of Clinical Microbiology and Infectious Diseases, School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"235","reference":[{"key":"e_1_3_3_2_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.foodcont.2020.107737"},{"key":"e_1_3_3_3_2","unstructured":"Grace D Alonso S Mutua F Roesel K Lindahl J Amenu K. 2018. Food safety investment expert advice: Burkina Faso Ethiopia Nigeria. ILRI Nairobi Kenya. https:\/\/hdl.handle.net\/10568\/91963. Accessed 14 March 2022."},{"key":"e_1_3_3_4_2","unstructured":"Shahbandeh M. 13 July 2022. Production of meat worldwide by meat type. Statista. https:\/\/www.statista.com\/statistics\/237632\/production-of-meat-worldwide-since-1990\/. Accessed 6 March 2022."},{"key":"e_1_3_3_5_2","doi-asserted-by":"crossref","unstructured":"European Food Safety Authority European Centre for Disease Prevention and Control. 19 November 2019. The European Union One Health 2018 zoonoses report. https:\/\/www.ecdc.europa.eu\/sites\/default\/files\/documents\/zoonoses-EU-one-health-2018-report.pdf. Accessed 6 March 2022.","DOI":"10.2903\/j.efsa.2021.6406"},{"key":"e_1_3_3_6_2","doi-asserted-by":"publisher","DOI":"10.15585\/mmwr.mm6816a2"},{"key":"e_1_3_3_7_2","doi-asserted-by":"publisher","DOI":"10.1016\/S1473-3099(10)70072-4"},{"key":"e_1_3_3_8_2","doi-asserted-by":"publisher","DOI":"10.1016\/B978-0-323-55512-8.00049-1"},{"key":"e_1_3_3_9_2","doi-asserted-by":"publisher","DOI":"10.1038\/ng.3644"},{"key":"e_1_3_3_10_2","doi-asserted-by":"publisher","DOI":"10.1016\/S1473-3099(19)30418-9"},{"key":"e_1_3_3_11_2","doi-asserted-by":"publisher","DOI":"10.1016\/j.tmaid.2011.11.001"},{"key":"e_1_3_3_12_2","doi-asserted-by":"publisher","DOI":"10.1016\/S0140-6736(11)61752-2"},{"key":"e_1_3_3_13_2","doi-asserted-by":"publisher","DOI":"10.3201\/eid0703.017303"},{"key":"e_1_3_3_14_2","doi-asserted-by":"publisher","DOI":"10.2307\/1592867"},{"key":"e_1_3_3_15_2","doi-asserted-by":"publisher","DOI":"10.1128\/JCM.39.1.154-161.2001"},{"key":"e_1_3_3_16_2","doi-asserted-by":"publisher","DOI":"10.1038\/ng.2423"},{"key":"e_1_3_3_17_2","doi-asserted-by":"publisher","DOI":"10.1101\/gr.091017.109"},{"key":"e_1_3_3_18_2","doi-asserted-by":"publisher","DOI":"10.7705\/biomedica.v39i1.4155"},{"key":"e_1_3_3_19_2","doi-asserted-by":"publisher","DOI":"10.1016\/S1473-3099(21)00615-0"},{"key":"e_1_3_3_20_2","doi-asserted-by":"publisher","DOI":"10.1016\/S2666-5247(20)30067-7"},{"key":"e_1_3_3_21_2","doi-asserted-by":"publisher","DOI":"10.3389\/fmicb.2014.00770"},{"key":"e_1_3_3_22_2","doi-asserted-by":"publisher","DOI":"10.1101\/gr.077404.108"},{"key":"e_1_3_3_23_2","doi-asserted-by":"publisher","DOI":"10.1099\/mgen.0.000785"},{"key":"e_1_3_3_24_2","doi-asserted-by":"publisher","DOI":"10.1002\/bit.20617"},{"key":"e_1_3_3_25_2","doi-asserted-by":"publisher","DOI":"10.1373\/clinchem.2008.112797"},{"key":"e_1_3_3_26_2","doi-asserted-by":"publisher","DOI":"10.1186\/s13059-021-02536-3"},{"key":"e_1_3_3_27_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btu153"},{"key":"e_1_3_3_28_2","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv421"},{"key":"e_1_3_3_29_2","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gng093"}],"container-title":["Microbiology Spectrum"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/spectrum.03182-22","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.asm.org\/doi\/pdf\/10.1128\/spectrum.03182-22","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,12,21]],"date-time":"2022-12-21T14:20:53Z","timestamp":1671632453000},"score":1,"resource":{"primary":{"URL":"https:\/\/journals.asm.org\/doi\/10.1128\/spectrum.03182-22"}},"subtitle":[],"editor":[{"given":"Ethel","family":"Bayer-Santos","sequence":"additional","affiliation":[],"role":[{"role":"editor","vocabulary":"crossref"}]}],"short-title":[],"issued":{"date-parts":[[2022,12,21]]},"references-count":28,"journal-issue":{"issue":"6","published-print":{"date-parts":[[2022,12,21]]}},"alternative-id":["10.1128\/spectrum.03182-22"],"URL":"https:\/\/doi.org\/10.1128\/spectrum.03182-22","relation":{},"ISSN":["2165-0497"],"issn-type":[{"value":"2165-0497","type":"electronic"}],"subject":[],"published":{"date-parts":[[2022,12,21]]},"assertion":[{"value":"2022-08-13","order":0,"name":"received","label":"Received","group":{"name":"publication_history","label":"Publication History"}},{"value":"2022-11-01","order":1,"name":"accepted","label":"Accepted","group":{"name":"publication_history","label":"Publication History"}},{"value":"2022-11-21","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}],"article-number":"e03182-22"}}