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Spatially correlated intensity variation and warp variation are modeled as random effects, resulting in a nonlinear mixed-effects model that enables simultaneous estimation of template and model parameters by optimization of the likelihood function. We propose an algorithm for fitting the model which alternates estimation of variance parameters and image registration. This approach avoids the potential estimation bias in the template estimate that arises when treating registration as a preprocessing step. We apply the model to datasets of facial images and 2D brain magnetic resonance images to illustrate the simultaneous estimation and prediction of intensity and warp effects.<\/jats:p>","DOI":"10.1137\/16m1070980","type":"journal-article","created":{"date-parts":[[2017,4,27]],"date-time":"2017-04-27T14:22:09Z","timestamp":1493302929000},"page":"578-601","source":"Crossref","is-referenced-by-count":2,"title":["Most Likely Separation of Intensity and Warping Effects in Image Registration"],"prefix":"10.1137","volume":"10","author":[{"given":"Line","family":"K\u00fchnel","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Stefan","family":"Sommer","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Akshay","family":"Pai","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Lars Lau","family":"Raket","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"351","published-online":{"date-parts":[[2017,4,27]]},"reference":[{"key":"atypb1","doi-asserted-by":"publisher","DOI":"10.1137\/140971762"},{"key":"atypb2","doi-asserted-by":"publisher","DOI":"10.1006\/cviu.1996.0006"},{"key":"atypb3","first-page":"187","author":"Blanz V.","year":"1999","journal-title":"New York"},{"key":"atypb4","doi-asserted-by":"publisher","DOI":"10.1023\/B:VISI.0000045324.43199.43"},{"key":"atypb5","doi-asserted-by":"publisher","DOI":"10.1198\/jasa.2011.tm10155"},{"key":"atypb6","first-page":"76","author":"Carpenter B.","year":"2017","journal-title":"J. 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