{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2022,4,1]],"date-time":"2022-04-01T02:34:54Z","timestamp":1648780494525},"reference-count":4,"publisher":"World Scientific Pub Co Pte Lt","issue":"02","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Int. J. Found. Comput. Sci."],"published-print":{"date-parts":[[2008,4]]},"abstract":"<jats:p> We show how the concept of an annotated ordered set can be used to model large taxonomically structured ontologies such as the Gene Ontology. By constructing a formal context consistent with a given annotated ordered set, their concept lattice representations are derived. We develop the fundamental mathematical relations present in this formulation, in particular deriving a conceptual pre-ordering of the taxonomy, and constructing a correspondence between the annotations of an ordered set and the closure systems of its filter lattice. We study an example from the Gene Ontology to demonstrate how the introduced technique can be utilized for taxonomy review. <\/jats:p>","DOI":"10.1142\/s0129054108005711","type":"journal-article","created":{"date-parts":[[2008,4,10]],"date-time":"2008-04-10T11:30:22Z","timestamp":1207827022000},"page":"345-358","source":"Crossref","is-referenced-by-count":2,"title":["ADJUSTING ANNOTATED TAXONOMIES"],"prefix":"10.1142","volume":"19","author":[{"given":"TIM B.","family":"KAISER","sequence":"first","affiliation":[{"name":"Department of Mathematics, Darmstadt University of Technology, 64289 Darmstadt, Germany"}]},{"given":"STEFAN E.","family":"SCHMIDT","sequence":"additional","affiliation":[{"name":"Institute of Algebra, Technische Universit\u00e4t Dresden, 01062 Dresden, Germany"}]},{"given":"CLIFF A.","family":"JOSLYN","sequence":"additional","affiliation":[{"name":"Knowledge Systems Group, Pacific Northwest National Laboratory, Richland, WA 99352, USA"}]}],"member":"219","published-online":{"date-parts":[[2011,11,20]]},"reference":[{"key":"rf3","volume-title":"Introduction to Lattices and Order","author":"Davey B. A.","year":"1990"},{"key":"rf4","volume-title":"Types and Constraints for Lexical Semantics and Linking","author":"Davis Anthony R.","year":"2000"},{"key":"rf5","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-642-59830-2"},{"key":"rf6","first-page":"169","author":"Joslyn C. A.","journal-title":"Bioinformatics"}],"container-title":["International Journal of Foundations of Computer Science"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.worldscientific.com\/doi\/pdf\/10.1142\/S0129054108005711","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,8,7]],"date-time":"2019-08-07T00:41:05Z","timestamp":1565138465000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.worldscientific.com\/doi\/abs\/10.1142\/S0129054108005711"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2008,4]]},"references-count":4,"journal-issue":{"issue":"02","published-online":{"date-parts":[[2011,11,20]]},"published-print":{"date-parts":[[2008,4]]}},"alternative-id":["10.1142\/S0129054108005711"],"URL":"https:\/\/doi.org\/10.1142\/s0129054108005711","relation":{},"ISSN":["0129-0541","1793-6373"],"issn-type":[{"value":"0129-0541","type":"print"},{"value":"1793-6373","type":"electronic"}],"subject":[],"published":{"date-parts":[[2008,4]]}}}