{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2023,8,29]],"date-time":"2023-08-29T07:48:33Z","timestamp":1693295313122},"reference-count":10,"publisher":"World Scientific Pub Co Pte Lt","issue":"05","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["J. Bioinform. Comput. Biol."],"published-print":{"date-parts":[[2017,10]]},"abstract":"<jats:p> Emerging bioimaging technologies enable us to capture various dynamic cellular activities [Formula: see text]. As large amounts of data are obtained these days and it is becoming unrealistic to manually process massive number of images, automatic analysis methods are required. One of the issues for automatic image segmentation is that image-taking conditions are variable. Thus, commonly, many manual inputs are required according to each image. In this paper, we propose a bone marrow cavity (BMC) segmentation method for bone images as BMC is considered to be related to the mechanism of bone remodeling, osteoporosis, and so on. To reduce manual inputs to segment BMC, we classified the texture pattern using wavelet transformation and support vector machine. We also integrated the result of texture pattern classification into the graph-cuts-based image segmentation method because texture analysis does not consider spatial continuity. Our method is applicable to a particular frame in an image sequence in which the condition of fluorescent material is variable. In the experiment, we evaluated our method with nine types of mother wavelets and several sets of scale parameters. The proposed method with graph-cuts and texture pattern classification performs well without manual inputs by a user. <\/jats:p>","DOI":"10.1142\/s0219720017400042","type":"journal-article","created":{"date-parts":[[2017,8,25]],"date-time":"2017-08-25T03:22:38Z","timestamp":1503631358000},"page":"1740004","source":"Crossref","is-referenced-by-count":4,"title":["Bone marrow cavity segmentation using graph-cuts with wavelet-based texture feature"],"prefix":"10.1142","volume":"15","author":[{"given":"Hironori","family":"Shigeta","sequence":"first","affiliation":[{"name":"Graduate School of Information Science and Technology, Osaka University, Yamadaoka 1-5, Suita, Osaka, Japan"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Tomohiro","family":"Mashita","sequence":"additional","affiliation":[{"name":"Graduate School of Information Science and Technology, Osaka University, Yamadaoka 1-5, Suita, Osaka, Japan"},{"name":"Cybermedia Center, Osaka University, Japan"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Junichi","family":"Kikuta","sequence":"additional","affiliation":[{"name":"Graduate School of Medicine and Frontier Biosciences, Osaka University, Japan"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Shigeto","family":"Seno","sequence":"additional","affiliation":[{"name":"Graduate School of Information Science and Technology, Osaka University, Yamadaoka 1-5, Suita, Osaka, Japan"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Haruo","family":"Takemura","sequence":"additional","affiliation":[{"name":"Graduate School of Information Science and Technology, Osaka University, Yamadaoka 1-5, Suita, Osaka, Japan"},{"name":"Cybermedia Center, Osaka University, Japan"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Masaru","family":"Ishii","sequence":"additional","affiliation":[{"name":"Graduate School of Medicine and Frontier Biosciences, Osaka University, Japan"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hideo","family":"Matsuda","sequence":"additional","affiliation":[{"name":"Graduate School of Information Science and Technology, Osaka University, Yamadaoka 1-5, Suita, Osaka, Japan"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"219","published-online":{"date-parts":[[2017,10,10]]},"reference":[{"key":"S0219720017400042BIB001","first-page":"866","volume":"123","author":"Kikuta J","year":"2013","journal-title":"J Clin Invest"},{"key":"S0219720017400042BIB005","first-page":"270","author":"Fujisaki K","year":"2013","journal-title":"The 1st Int Workshop on BioImage Recognition"},{"key":"S0219720017400042BIB006","doi-asserted-by":"publisher","DOI":"10.1016\/j.semcdb.2009.07.004"},{"key":"S0219720017400042BIB008","doi-asserted-by":"crossref","first-page":"180","DOI":"10.1515\/jib-2011-180","volume":"8","author":"Olivieri D","year":"2011","journal-title":"J Integr Bioinform"},{"key":"S0219720017400042BIB009","doi-asserted-by":"publisher","DOI":"10.1109\/TMI.2008.923966"},{"key":"S0219720017400042BIB010","first-page":"479268","author":"Danesh H","year":"2014","journal-title":"Comput Math Methods Med"},{"key":"S0219720017400042BIB012","doi-asserted-by":"publisher","DOI":"10.1137\/S1052623496303470"},{"key":"S0219720017400042BIB014","doi-asserted-by":"publisher","DOI":"10.1007\/s11263-006-7934-5"},{"key":"S0219720017400042BIB016","doi-asserted-by":"publisher","DOI":"10.2144\/000112517"},{"key":"S0219720017400042BIB019","doi-asserted-by":"publisher","DOI":"10.1175\/1520-0477(1998)079<0061:APGTWA>2.0.CO;2"}],"container-title":["Journal of Bioinformatics and Computational Biology"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/www.worldscientific.com\/doi\/pdf\/10.1142\/S0219720017400042","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,8,7]],"date-time":"2019-08-07T13:30:55Z","timestamp":1565184655000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.worldscientific.com\/doi\/abs\/10.1142\/S0219720017400042"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,10]]},"references-count":10,"journal-issue":{"issue":"05","published-online":{"date-parts":[[2017,10,10]]},"published-print":{"date-parts":[[2017,10]]}},"alternative-id":["10.1142\/S0219720017400042"],"URL":"https:\/\/doi.org\/10.1142\/s0219720017400042","relation":{},"ISSN":["0219-7200","1757-6334"],"issn-type":[{"value":"0219-7200","type":"print"},{"value":"1757-6334","type":"electronic"}],"subject":[],"published":{"date-parts":[[2017,10]]}}}