{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,6,19]],"date-time":"2025-06-19T04:53:39Z","timestamp":1750308819741,"version":"3.41.0"},"publisher-location":"New York, NY, USA","reference-count":20,"publisher":"ACM","license":[{"start":{"date-parts":[[2011,5,16]],"date-time":"2011-05-16T00:00:00Z","timestamp":1305504000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.acm.org\/publications\/policies\/copyright_policy#Background"}],"content-domain":{"domain":["dl.acm.org"],"crossmark-restriction":true},"short-container-title":[],"published-print":{"date-parts":[[2011,5,16]]},"DOI":"10.1145\/1992896.1992898","type":"proceedings-article","created":{"date-parts":[[2011,6,6]],"date-time":"2011-06-06T11:53:52Z","timestamp":1307361232000},"page":"9-16","update-policy":"https:\/\/doi.org\/10.1145\/crossmark-policy","source":"Crossref","is-referenced-by-count":0,"title":["Protein structure-based method for identifying horizontal gene transfer"],"prefix":"10.1145","author":[{"given":"Venkat R. B.","family":"Santosh","sequence":"first","affiliation":[{"name":"University of Nebraska-Lincoln, Lincoln, NE"}]},{"given":"Mark A.","family":"Griep","sequence":"additional","affiliation":[{"name":"University of Nebraska-Lincoln, Lincoln, NE"}]},{"given":"Peter Z.","family":"Revesz","sequence":"additional","affiliation":[{"name":"University of Nebraska-Lincoln, Lincoln, NE"}]}],"member":"320","published-online":{"date-parts":[[2011,5,16]]},"reference":[{"key":"e_1_3_2_1_1_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1348-0421.1960.tb00170.x"},{"key":"e_1_3_2_1_2_1","doi-asserted-by":"crossref","unstructured":"Barlow M. 2009. \"What antimicrobial resistance has taught us about horizontal gene transfer\". Methods in Molecular Biology (Clifton N. J.) 532: 397--411.  Barlow M. 2009. \"What antimicrobial resistance has taught us about horizontal gene transfer\". Methods in Molecular Biology (Clifton N. J.) 532: 397--411.","DOI":"10.1007\/978-1-60327-853-9_23"},{"key":"e_1_3_2_1_3_1","volume-title":"Bergey's Manual of Determinative Bacteriology","author":"Bergey D. H.","unstructured":"Bergey , D. H. , Holt , J. G. , Krieg , N. R. , Sneath , P. H. A. , 1994. Bergey's Manual of Determinative Bacteriology , ( 9 th ed.), Lippincott Williams & Wilkins . Bergey, D. H., Holt, J. G., Krieg, N. R., Sneath, P. H. A., 1994. Bergey's Manual of Determinative Bacteriology, (9th ed.), Lippincott Williams & Wilkins.","edition":"9"},{"key":"e_1_3_2_1_4_1","first-page":"D326","article-title":"The Gene Ontology (GO) project","volume":"34","author":"Consortium","year":"2006","unstructured":"Consortium , T. G. O. 2006 . The Gene Ontology (GO) project . Nucleic Acids Research , 34 , D326 . Consortium, T. G. O. 2006. The Gene Ontology (GO) project. Nucleic Acids Research, 34, D326.","journal-title":"Nucleic Acids Research"},{"key":"e_1_3_2_1_5_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-1-60327-853-9_12"},{"volume-title":"Proteins: structures and molecular properties","author":"Creighton T. H.","key":"e_1_3_2_1_6_1","unstructured":"Creighton , T. H. , 1993. Proteins: structures and molecular properties . San Francisco : W. H. Freeman . Creighton, T. H., 1993. Proteins: structures and molecular properties. San Francisco: W. H. Freeman."},{"key":"e_1_3_2_1_7_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/16.6.566"},{"key":"e_1_3_2_1_8_1","doi-asserted-by":"publisher","DOI":"10.1101\/gr.130000"},{"volume-title":"An Introduction to Genetic Analysis","author":"Griffiths A. J. F.","key":"e_1_3_2_1_9_1","unstructured":"Griffiths A. J. F. , Miller J. H. , Suzuki D. T. , Lewontin R. C. , Gelbart W. M. , 2000 , An Introduction to Genetic Analysis . W. H. Freeman and Company . Griffiths A. J. F., Miller J. H., Suzuki D. T., Lewontin R. C., Gelbart W. M., 2000, An Introduction to Genetic Analysis. W. H. Freeman and Company."},{"key":"e_1_3_2_1_10_1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkm796"},{"key":"e_1_3_2_1_11_1","volume-title":"Jmol: An open-source Java viewer for chemical structures in 3D","author":"Jmol","year":"2010","unstructured":"Jmol . 2010 . Jmol: An open-source Java viewer for chemical structures in 3D . http:\/\/www.jmol.org\/ Jmol. 2010. Jmol: An open-source Java viewer for chemical structures in 3D. http:\/\/www.jmol.org\/"},{"key":"e_1_3_2_1_12_1","doi-asserted-by":"crossref","unstructured":"La Scola B. Desnues C. Pagnier I. Robert C. Barrassi L. Fournous G. Merchat M. Suzan-Monti M. Forterre P. Koonin E. Raoult D. 2008. \"The virophage as a unique parasite of the giant mimivirus\".  La Scola B. Desnues C. Pagnier I. Robert C. Barrassi L. Fournous G. Merchat M. Suzan-Monti M. Forterre P. Koonin E. Raoult D. 2008. \"The virophage as a unique parasite of the giant mimivirus\".","DOI":"10.1038\/nature07218"},{"volume-title":"Cross-species Gene Transfer","author":"Syvanen P.","key":"e_1_3_2_1_13_1","unstructured":"Syvanen , P. , 1984. Cross-species Gene Transfer ; Implications for a New Theory of Evolution. Harvard Medical School, Boston, MA. Syvanen, P., 1984. Cross-species Gene Transfer; Implications for a New Theory of Evolution. Harvard Medical School, Boston, MA."},{"key":"e_1_3_2_1_14_1","unstructured":"Gogarten P. 2000. \"Horizontal Gene Transfer - A New Paradigm for Biology\" Esalan Center for theory and research.  Gogarten P. 2000. \"Horizontal Gene Transfer - A New Paradigm for Biology\" Esalan Center for theory and research."},{"volume-title":"Introduction to databases: From biological to spatio-temporal","author":"Revesz P.","key":"e_1_3_2_1_15_1","unstructured":"Revesz , P. , 2010. Introduction to databases: From biological to spatio-temporal , Springer , New York . Revesz, P., 2010. Introduction to databases: From biological to spatio-temporal, Springer, New York."},{"key":"e_1_3_2_1_16_1","volume-title":"Structure in: Baron's Medical Microbiology (Baron S et al.","author":"Salton M. J. R.","unstructured":"Salton , M. J. R. , Kim , K. S. , 1996. Structure in: Baron's Medical Microbiology (Baron S et al. , eds.) ( 4 th ed.). Univ of Texas Medical Branch . Salton, M. J. R., Kim, K. S., 1996. Structure in: Baron's Medical Microbiology (Baron S et al., eds.) (4th ed.). Univ of Texas Medical Branch.","edition":"4"},{"key":"e_1_3_2_1_17_1","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-4-41"},{"key":"e_1_3_2_1_18_1","doi-asserted-by":"publisher","DOI":"10.1007\/11864127_17"},{"key":"e_1_3_2_1_19_1","volume-title":"PROFESS: A protein function, evolution, structure and sequence database. Database -- The Journal of Biological Databases and Curation, doi number 10.1093.","author":"Triplet T.","year":"2010","unstructured":"Triplet , T. , Shortridge , M. , Griep , M. , Stark , J. L. , Powers , R. , Revesz , P. , 2010 . PROFESS: A protein function, evolution, structure and sequence database. Database -- The Journal of Biological Databases and Curation, doi number 10.1093. Triplet, T., Shortridge, M., Griep, M., Stark, J. L., Powers, R., Revesz, P., 2010. PROFESS: A protein function, evolution, structure and sequence database. Database -- The Journal of Biological Databases and Curation, doi number 10.1093."},{"key":"e_1_3_2_1_20_1","unstructured":"Wei S. Cowen L. Brodley C. Brady A. Sculley D. Slonim D. K.. 2008. A distance-based method for detecting horizontal gene transfer in whole genomes.  Wei S. Cowen L. Brodley C. Brady A. Sculley D. Slonim D. K.. 2008. A distance-based method for detecting horizontal gene transfer in whole genomes."}],"event":{"name":"C3S2E '11: Fourth International C* Conference on Computer Science & Software Engineering","sponsor":["ACM Association for Computing Machinery","BytePress","Concordia University Concordia University"],"location":"Montreal Quebec Canada","acronym":"C3S2E '11"},"container-title":["Proceedings of The Fourth International C* Conference on Computer Science and Software Engineering"],"original-title":[],"link":[{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/1992896.1992898","content-type":"unspecified","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/dl.acm.org\/doi\/pdf\/10.1145\/1992896.1992898","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,6,18]],"date-time":"2025-06-18T20:26:39Z","timestamp":1750278399000},"score":1,"resource":{"primary":{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/1992896.1992898"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2011,5,16]]},"references-count":20,"alternative-id":["10.1145\/1992896.1992898","10.1145\/1992896"],"URL":"https:\/\/doi.org\/10.1145\/1992896.1992898","relation":{},"subject":[],"published":{"date-parts":[[2011,5,16]]},"assertion":[{"value":"2011-05-16","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}