{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,6,19]],"date-time":"2025-06-19T04:25:59Z","timestamp":1750307159288,"version":"3.41.0"},"publisher-location":"New York, NY, USA","reference-count":28,"publisher":"ACM","license":[{"start":{"date-parts":[[2011,9,21]],"date-time":"2011-09-21T00:00:00Z","timestamp":1316563200000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.acm.org\/publications\/policies\/copyright_policy#Background"}],"funder":[{"DOI":"10.13039\/501100001459","name":"Ministry of Education - Singapore","doi-asserted-by":"publisher","award":["T208A2104"],"award-info":[{"award-number":["T208A2104"]}],"id":[{"id":"10.13039\/501100001459","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["dl.acm.org"],"crossmark-restriction":true},"short-container-title":[],"published-print":{"date-parts":[[2011,9,21]]},"DOI":"10.1145\/2037509.2037516","type":"proceedings-article","created":{"date-parts":[[2011,9,23]],"date-time":"2011-09-23T15:13:10Z","timestamp":1316790790000},"page":"35-44","update-policy":"https:\/\/doi.org\/10.1145\/crossmark-policy","source":"Crossref","is-referenced-by-count":4,"title":["A hybrid factored frontier algorithm for dynamic Bayesian network models of biopathways"],"prefix":"10.1145","author":[{"given":"Sucheendra K.","family":"Palaniappan","sequence":"first","affiliation":[{"name":"National University of Singapore"}]},{"given":"S.","family":"Akshay","sequence":"additional","affiliation":[{"name":"National University of Singapore"}]},{"given":"Blaise","family":"Genest","sequence":"additional","affiliation":[{"name":"CNRS, IPAL UMI, Singapore"}]},{"given":"P. S.","family":"Thiagarajan","sequence":"additional","affiliation":[{"name":"National University of Singapore"}]}],"member":"320","published-online":{"date-parts":[[2011,9,21]]},"reference":[{"key":"e_1_3_2_1_1_1","volume-title":"AAAI","author":"Bidyuk Bozhena","year":"2006","unstructured":"Bozhena Bidyuk and Rina Dechter . An anytime scheme for bounding posterior beliefs . In AAAI , 2006 . Bozhena Bidyuk and Rina Dechter. An anytime scheme for bounding posterior beliefs. In AAAI, 2006."},{"key":"e_1_3_2_1_2_1","doi-asserted-by":"crossref","first-page":"1958","DOI":"10.21437\/Interspeech.2010-100","volume-title":"INTERSPEECH","author":"Bilmes Jeff","year":"2010","unstructured":"Jeff Bilmes and Hui Lin . Online adaptive learning for speech recognition decoding . In INTERSPEECH , pages 1958 -- 1961 , 2010 . Jeff Bilmes and Hui Lin. Online adaptive learning for speech recognition decoding. In INTERSPEECH, pages 1958--1961, 2010."},{"key":"e_1_3_2_1_3_1","volume-title":"Proceedings of the 14 th  Annual Conference on Uncertainty in Artificial Intelligence (UAI-98)","author":"Boyen Xavier","year":"1998","unstructured":"Xavier Boyen and Daphne Koller . Tractable inference for complex stochastic processes . In Proceedings of the 14 th Annual Conference on Uncertainty in Artificial Intelligence (UAI-98) , Madison, Wisconsin, USA, pages 33--42 , 1998 . Xavier Boyen and Daphne Koller. Tractable inference for complex stochastic processes. In Proceedings of the 14 th Annual Conference on Uncertainty in Artificial Intelligence (UAI-98), Madison, Wisconsin, USA, pages 33--42, 1998."},{"key":"e_1_3_2_1_4_1","first-page":"184","volume-title":"The statistical mechanics of complex signaling networks: nerve growth factor signaling. Physical Biology 1","author":"Brown K. S.","year":"2004","unstructured":"K. S. Brown , C. C. Hill , G. A. Calero , K. H. Lee , J. P. Sethna , and R. A. Cerione . The statistical mechanics of complex signaling networks: nerve growth factor signaling. Physical Biology 1 , pages 184 -- 195 , 2004 . K. S. Brown, C. C. Hill, G. A. Calero, K. H. Lee, J. P. Sethna, and R. A. Cerione. The statistical mechanics of complex signaling networks: nerve growth factor signaling. Physical Biology 1, pages 184--195, 2004."},{"key":"e_1_3_2_1_5_1","doi-asserted-by":"publisher","DOI":"10.5555\/2124284.2124287"},{"key":"e_1_3_2_1_6_1","doi-asserted-by":"publisher","DOI":"10.5555\/2392200.2392204"},{"key":"e_1_3_2_1_7_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.tcs.2010.10.022"},{"key":"e_1_3_2_1_8_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-540-88562-7_20"},{"key":"e_1_3_2_1_9_1","doi-asserted-by":"crossref","unstructured":"Francois\n      Fages\n     and \n      Aureli\u00e9n\n      Rizk\n    .\n  On the analysis of numerical data time series in temporal logic\n  . In M. Calder and S. Gilmore (Eds.) CMSB Vol\n  . 4695 of \n  Lecture Notes in Bioinformatics Springer pages \n  48\n  --\n  63 2007\n  .   Francois Fages and Aureli\u00e9n Rizk. On the analysis of numerical data time series in temporal logic. In M. Calder and S. Gilmore (Eds.) CMSB Vol. 4695 of Lecture Notes in Bioinformatics Springer pages 48--63 2007.","DOI":"10.1007\/978-3-540-75140-3_4"},{"key":"e_1_3_2_1_10_1","doi-asserted-by":"publisher","DOI":"10.1007\/s11263-006-7899-4"},{"key":"e_1_3_2_1_11_1","volume-title":"Inferring cellular networks using probabilistic graphical models. Science, (303(5659)):799--805","author":"Friedman Nir","year":"2004","unstructured":"Nir Friedman . Inferring cellular networks using probabilistic graphical models. Science, (303(5659)):799--805 , 2004 . Nir Friedman. Inferring cellular networks using probabilistic graphical models. Science, (303(5659)):799--805, 2004."},{"key":"e_1_3_2_1_12_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-540-31980-1_18"},{"key":"e_1_3_2_1_13_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-642-02658-4_27"},{"key":"e_1_3_2_1_14_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-642-03845-7_15"},{"key":"e_1_3_2_1_15_1","first-page":"247","volume-title":"Untangling the signalling wires. Nature Cell Biology 9 (3)","author":"Kholodenko B. N.","year":"2007","unstructured":"B. N. Kholodenko . Untangling the signalling wires. Nature Cell Biology 9 (3) , pages 247 -- 249 , 2007 . B. N. Kholodenko. Untangling the signalling wires. Nature Cell Biology 9 (3), pages 247--249, 2007."},{"key":"e_1_3_2_1_16_1","volume-title":"Probabilistic Graphical Models - Principles and Techniques","author":"Koller Daphne","year":"2009","unstructured":"Daphne Koller and Nir Friedman . Probabilistic Graphical Models - Principles and Techniques . MIT Press , 2009 . Daphne Koller and Nir Friedman. Probabilistic Graphical Models - Principles and Techniques. MIT Press, 2009."},{"key":"e_1_3_2_1_17_1","series-title":"Lecture Notes in Computer Science","doi-asserted-by":"crossref","first-page":"200","DOI":"10.1007\/3-540-46029-2_13","volume-title":"Computer Performance Evaluation\/TOOLS","author":"Kwiatkowska Marta Z.","year":"2002","unstructured":"Marta Z. Kwiatkowska , Gethin Norman , and David Parker . PRISM: Probabilistic symbolic model checker . In T. Field, P. G. Harrison, J. T. Bradley, U. Harder (Eds.), Computer Performance Evaluation\/TOOLS , Vol. 2324 of Lecture Notes in Computer Science , Springer , pages 200 -- 204 , 2002 . Marta Z. Kwiatkowska, Gethin Norman, and David Parker. PRISM: Probabilistic symbolic model checker. In T. Field, P. G. Harrison, J. T. Bradley, U. Harder (Eds.), Computer Performance Evaluation\/TOOLS, Vol. 2324 of Lecture Notes in Computer Science, Springer, pages 200--204, 2002."},{"key":"e_1_3_2_1_18_1","volume-title":"Symbolic Systems Biology","author":"Kwiatkowska Marta Z.","year":"2010","unstructured":"Marta Z. Kwiatkowska , Gethin Norman , and David Parker . Symbolic Systems Biology , chapter Probabilistic Model Checking for Systems Biology. Jones and Bartlett , 2010 . Marta Z. Kwiatkowska, Gethin Norman, and David Parker. Symbolic Systems Biology, chapter Probabilistic Model Checking for Systems Biology. Jones and Bartlett, 2010."},{"key":"e_1_3_2_1_19_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.tcs.2011.01.021"},{"key":"e_1_3_2_1_20_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-642-03845-7_17"},{"key":"e_1_3_2_1_21_1","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pcbi.1001059"},{"key":"e_1_3_2_1_22_1","doi-asserted-by":"publisher","DOI":"10.1038\/msb.2009.91"},{"key":"e_1_3_2_1_23_1","doi-asserted-by":"publisher","DOI":"10.1109\/49.661103"},{"key":"e_1_3_2_1_24_1","unstructured":"Kevin P. Murphy. Bayes Net Toolbox for Matlab. http:\/\/bnt.googlecode.com.  Kevin P. Murphy. Bayes Net Toolbox for Matlab. http:\/\/bnt.googlecode.com."},{"key":"e_1_3_2_1_25_1","volume-title":"Proceedings of the 17 th  Annual Conference on Uncertainty in Artificial Intelligence","author":"Kevin","year":"2001","unstructured":"Kevin P. Murphy and Yair Weiss. The factored frontier algorithm for approximate inference in DBNs . In Proceedings of the 17 th Annual Conference on Uncertainty in Artificial Intelligence , San Francisco, CA, USA, pages 378--385 , 2001 . Kevin P. Murphy and Yair Weiss. The factored frontier algorithm for approximate inference in DBNs. In Proceedings of the 17 th Annual Conference on Uncertainty in Artificial Intelligence, San Francisco, CA, USA, pages 378--385, 2001."},{"key":"e_1_3_2_1_26_1","doi-asserted-by":"publisher","DOI":"10.1093\/nar\/gkj092"},{"key":"e_1_3_2_1_27_1","doi-asserted-by":"publisher","DOI":"10.1145\/2037509.2037516"},{"key":"e_1_3_2_1_28_1","doi-asserted-by":"publisher","DOI":"10.1126\/stke.3442006re6"}],"event":{"name":"CMSB'11: 9th International Conference on Computational Methods in Systems Biology","sponsor":["TCSIM IEEE Computer Society Technical Committee on Simulation","University Henri-Poincare University Henri-Poincare - France","NVIDIA","CNRS Centre National De La Rechercue Scientifique","Microsoft Research Microsoft Research","SIGBio ACM Special Interest Group on Bioinformatics"],"location":"Paris France","acronym":"CMSB'11"},"container-title":["Proceedings of the 9th International Conference on Computational Methods in Systems Biology"],"original-title":[],"link":[{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/2037509.2037516","content-type":"unspecified","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/dl.acm.org\/doi\/pdf\/10.1145\/2037509.2037516","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,6,18]],"date-time":"2025-06-18T09:54:27Z","timestamp":1750240467000},"score":1,"resource":{"primary":{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/2037509.2037516"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2011,9,21]]},"references-count":28,"alternative-id":["10.1145\/2037509.2037516","10.1145\/2037509"],"URL":"https:\/\/doi.org\/10.1145\/2037509.2037516","relation":{},"subject":[],"published":{"date-parts":[[2011,9,21]]},"assertion":[{"value":"2011-09-21","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}