{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,5]],"date-time":"2026-10-05T16:23:08Z","timestamp":1791217388711,"version":"4.1.0"},"publisher-location":"New York, NY, USA","reference-count":21,"publisher":"ACM","license":[{"start":{"date-parts":[[2012,10,7]],"date-time":"2012-10-07T00:00:00Z","timestamp":1349568000000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.acm.org\/publications\/policies\/copyright_policy#Background"}],"content-domain":{"domain":["dl.acm.org"],"crossmark-restriction":true},"short-container-title":[],"published-print":{"date-parts":[[2012,10,7]]},"DOI":"10.1145\/2382936.2382938","type":"proceedings-article","created":{"date-parts":[[2012,10,15]],"date-time":"2012-10-15T19:26:46Z","timestamp":1350329206000},"page":"12-19","update-policy":"https:\/\/doi.org\/10.1145\/crossmark-policy","source":"Crossref","is-referenced-by-count":18,"title":["ERNE-BS5"],"prefix":"10.1145","author":[{"given":"Nicola","family":"Prezza","sequence":"first","affiliation":[{"name":"University of Udine, Udine, Italy"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Cristian","family":"Del Fabbro","sequence":"additional","affiliation":[{"name":"Istituto di Genomica Applicata, Udine, Italy"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Francesco","family":"Vezzi","sequence":"additional","affiliation":[{"name":"KTH Royal Institute of Technology, Science for Life Laboratory, Solna, Sweden"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Emanuale","family":"De Paoli","sequence":"additional","affiliation":[{"name":"University of Udine, Udine, Italy"}],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Alberto","family":"Policriti","sequence":"additional","affiliation":[{"name":"University of Udine, Udine, Italy"}],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"320","published-online":{"date-parts":[[2012,10,7]]},"reference":[{"key":"e_1_3_2_1_1_1","volume-title":"Nature","author":"Becker C.","year":"2011","unstructured":"C. Becker , J. Hagmann , J. M\u00fcller , D. Koenig , O. Stegle , K. Borgwardt , and D. Weigel . Spontaneous epigenetic variation in the Arabidopsis thaliana methylome . Nature , Sept. 2011 . C. Becker, J. Hagmann, J. M\u00fcller, D. Koenig, O. Stegle, K. Borgwardt, and D. Weigel. Spontaneous epigenetic variation in the Arabidopsis thaliana methylome. Nature, Sept. 2011."},{"key":"e_1_3_2_1_2_1","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-11-203"},{"key":"e_1_3_2_1_3_1","doi-asserted-by":"publisher","DOI":"10.1038\/nature06745"},{"key":"e_1_3_2_1_4_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/bts264"},{"key":"e_1_3_2_1_5_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp706"},{"key":"e_1_3_2_1_6_1","doi-asserted-by":"publisher","DOI":"10.1147\/rd.312.0249"},{"key":"e_1_3_2_1_7_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btr660"},{"key":"e_1_3_2_1_8_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btr167"},{"key":"e_1_3_2_1_9_1","volume-title":"DNA methylome analysis using short bisulfite sequencing data. Nature Methods, 9(2)","author":"Krueger F.","year":"2012","unstructured":"F. Krueger , B. Kreck , and A. Franke . DNA methylome analysis using short bisulfite sequencing data. Nature Methods, 9(2) , 2012 . F. Krueger, B. Kreck, and A. Franke. DNA methylome analysis using short bisulfite sequencing data. Nature Methods, 9(2), 2012."},{"key":"e_1_3_2_1_10_1","doi-asserted-by":"publisher","DOI":"10.1186\/gb-2009-10-3-r25"},{"key":"e_1_3_2_1_11_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp352"},{"key":"e_1_3_2_1_12_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btn025"},{"key":"e_1_3_2_1_13_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.cell.2008.03.029"},{"key":"e_1_3_2_1_14_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btq291"},{"key":"e_1_3_2_1_15_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btr394"},{"key":"e_1_3_2_1_16_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.jcss.2011.12.007"},{"key":"e_1_3_2_1_17_1","doi-asserted-by":"publisher","DOI":"10.1038\/nbt.1685"},{"issue":"8","key":"e_1_3_2_1_18_1","first-page":"597","article-title":"DNA methylation and human disease. Nature reviews","volume":"6","author":"Robertson K. D.","year":"2005","unstructured":"K. D. Robertson . DNA methylation and human disease. Nature reviews . Genetics , 6 ( 8 ): 597 -- 610 , Aug. 2005 . K. D. Robertson. DNA methylation and human disease. Nature reviews. Genetics, 6(8):597--610, Aug. 2005.","journal-title":"Genetics"},{"key":"e_1_3_2_1_19_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btp533"},{"key":"e_1_3_2_1_20_1","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btr617"},{"key":"e_1_3_2_1_21_1","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-10-232"}],"event":{"name":"BCB' 12: ACM International Conference on Bioinformatics, Computational Biology and Biomedicine","location":"Orlando Florida","acronym":"BCB' 12","sponsor":["SIGBio ACM Special Interest Group on Bioinformatics"]},"container-title":["Proceedings of the ACM Conference on Bioinformatics, Computational Biology and Biomedicine"],"original-title":[],"link":[{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/2382936.2382938","content-type":"unspecified","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/dl.acm.org\/doi\/pdf\/10.1145\/2382936.2382938","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,6,18]],"date-time":"2025-06-18T08:18:53Z","timestamp":1750234733000},"score":1,"resource":{"primary":{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/2382936.2382938"}},"subtitle":["aligning BS-treated sequences by multiple hits on a 5-letters alphabet"],"short-title":[],"issued":{"date-parts":[[2012,10,7]]},"references-count":21,"alternative-id":["10.1145\/2382936.2382938","10.1145\/2382936"],"URL":"https:\/\/doi.org\/10.1145\/2382936.2382938","relation":{},"subject":[],"published":{"date-parts":[[2012,10,7]]},"assertion":[{"value":"2012-10-07","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}