{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,12,11]],"date-time":"2025-12-11T03:01:59Z","timestamp":1765422119924,"version":"3.41.0"},"publisher-location":"New York, NY, USA","reference-count":47,"publisher":"ACM","license":[{"start":{"date-parts":[[2019,5,13]],"date-time":"2019-05-13T00:00:00Z","timestamp":1557705600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["dl.acm.org"],"crossmark-restriction":true},"short-container-title":[],"published-print":{"date-parts":[[2019,5,13]]},"DOI":"10.1145\/3308558.3313476","type":"proceedings-article","created":{"date-parts":[[2019,5,13]],"date-time":"2019-05-13T12:17:59Z","timestamp":1557749879000},"page":"218-227","update-policy":"https:\/\/doi.org\/10.1145\/crossmark-policy","source":"Crossref","is-referenced-by-count":29,"title":["Modeling Relational Drug-Target-Disease Interactions via Tensor Factorization with Multiple Web Sources"],"prefix":"10.1145","author":[{"given":"Huiyuan","family":"Chen","sequence":"first","affiliation":[{"name":"Case Western Reserve University, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jing","family":"Li","sequence":"additional","affiliation":[{"name":"Case Western Reserve University, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"320","published-online":{"date-parts":[[2019,5,13]]},"reference":[{"volume-title":"Optimization algorithms on matrix manifolds","author":"Absil P-A","unstructured":"P-A Absil , Robert Mahony , and Rodolphe Sepulchre . 2009. Optimization algorithms on matrix manifolds . Princeton University Press . P-A Absil, Robert Mahony, and Rodolphe Sepulchre. 2009. Optimization algorithms on matrix manifolds. Princeton University Press.","key":"e_1_3_2_1_1_1"},{"unstructured":"Evrim Acar Tamara G Kolda and Daniel M Dunlavy. 2011. All-at-once optimization for coupled matrix and tensor factorizations. arXiv preprint arXiv:1105.3422(2011).  Evrim Acar Tamara G Kolda and Daniel M Dunlavy. 2011. All-at-once optimization for coupled matrix and tensor factorizations. arXiv preprint arXiv:1105.3422(2011).","key":"e_1_3_2_1_2_1"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_3_1","DOI":"10.1140\/epjds\/s13688-015-0054-0"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_4_1","DOI":"10.1145\/3091478.3091513"},{"doi-asserted-by":"crossref","unstructured":"Sanaz Bahargam and E Papalexakis. 2018. Constrained Coupled Matrix-Tensor Factorization and its Application in Pattern and Topic Detection. In ASONAM.  Sanaz Bahargam and E Papalexakis. 2018. Constrained Coupled Matrix-Tensor Factorization and its Application in Pattern and Topic Detection. In ASONAM.","key":"e_1_3_2_1_5_1","DOI":"10.1109\/ASONAM.2018.8508739"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_6_1","DOI":"10.5555\/2627435.2638581"},{"key":"e_1_3_2_1_7_1","volume-title":"Lars Juhl Jensen, and Peer Bork","author":"Campillos Monica","year":"2008","unstructured":"Monica Campillos , Michael Kuhn , Anne-Claude Gavin , Lars Juhl Jensen, and Peer Bork . 2008 . Drug target identification using side-effect similarity. Science 321, 5886 (2008), 263-266. Monica Campillos, Michael Kuhn, Anne-Claude Gavin, Lars Juhl Jensen, and Peer Bork. 2008. Drug target identification using side-effect similarity. Science 321, 5886 (2008), 263-266."},{"doi-asserted-by":"crossref","unstructured":"Horacio Caniza Alfonso E Romero and Alberto Paccanaro. 2015. A network medicine approach to quantify distance between hereditary disease modules on the interactome. Scientific reports 5(2015) 17658.  Horacio Caniza Alfonso E Romero and Alberto Paccanaro. 2015. A network medicine approach to quantify distance between hereditary disease modules on the interactome. Scientific reports 5(2015) 17658.","key":"e_1_3_2_1_8_1","DOI":"10.1038\/srep17658"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_9_1","DOI":"10.1145\/3107411.3107473"},{"doi-asserted-by":"crossref","unstructured":"Huiyuan Chen and Jing Li. 2017. Learning Multiple Similarities of Users and Items in Recommender Systems. In ICDM.  Huiyuan Chen and Jing Li. 2017. Learning Multiple Similarities of Users and Items in Recommender Systems. In ICDM.","key":"e_1_3_2_1_10_1","DOI":"10.1109\/ICDM.2017.97"},{"doi-asserted-by":"crossref","unstructured":"Huiyuan Chen and Jing Li. 2018. DrugCom: Synergistic Discovery of Drug Combinations Using Tensor Decomposition. In ICDM.  Huiyuan Chen and Jing Li. 2018. DrugCom: Synergistic Discovery of Drug Combinations Using Tensor Decomposition. In ICDM.","key":"e_1_3_2_1_11_1","DOI":"10.1109\/ICDM.2018.00108"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_12_1","DOI":"10.1039\/c2mb00002d"},{"key":"e_1_3_2_1_13_1","volume-title":"Prediction of drug-target interactions and drug repositioning via network-based inference. PLoS computational biology 8, 5","author":"Cheng Feixiong","year":"2012","unstructured":"Feixiong Cheng , Chuang Liu , Jing Jiang , Weiqiang Lu , Weihua Li , Guixia Liu , Weixing Zhou , Jin Huang , and Yun Tang . 2012. Prediction of drug-target interactions and drug repositioning via network-based inference. PLoS computational biology 8, 5 ( 2012 ), e1002503. Feixiong Cheng, Chuang Liu, Jing Jiang, Weiqiang Lu, Weihua Li, Guixia Liu, Weixing Zhou, Jin Huang, and Yun Tang. 2012. Prediction of drug-target interactions and drug repositioning via network-based inference. PLoS computational biology 8, 5 (2012), e1002503."},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_14_1","DOI":"10.1137\/S0895479895290954"},{"key":"e_1_3_2_1_15_1","volume-title":"Association of off-label drug use and adverse drug events in an adult population. JAMA internal medicine 176, 1","author":"Eguale Tewodros","year":"2016","unstructured":"Tewodros Eguale , David L Buckeridge , Aman Verma , Nancy E Winslade , Andrea Benedetti , James A Hanley , and Robyn Tamblyn . 2016. Association of off-label drug use and adverse drug events in an adult population. JAMA internal medicine 176, 1 ( 2016 ), 55-63. Tewodros Eguale, David L Buckeridge, Aman Verma, Nancy E Winslade, Andrea Benedetti, James A Hanley, and Robyn Tamblyn. 2016. Association of off-label drug use and adverse drug events in an adult population. JAMA internal medicine 176, 1 (2016), 55-63."},{"doi-asserted-by":"crossref","unstructured":"Ali Ezzat Min Wu Xiao-Li Li and Chee-Keong Kwoh. 2018. Computational prediction of drug-target interactions using chemogenomic approaches: an empirical survey. Briefings in bioinformatics(2018).  Ali Ezzat Min Wu Xiao-Li Li and Chee-Keong Kwoh. 2018. Computational prediction of drug-target interactions using chemogenomic approaches: an empirical survey. Briefings in bioinformatics(2018).","key":"e_1_3_2_1_16_1","DOI":"10.1093\/bib\/bby002"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_17_1","DOI":"10.1109\/TCBB.2016.2530062"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_18_1","DOI":"10.1145\/2983323.2983782"},{"key":"e_1_3_2_1_19_1","volume-title":"Biocomputing","author":"Gonzalez Graciela","year":"2007","unstructured":"Graciela Gonzalez , Juan C Uribe , Luis Tari , Colleen Brophy , and Chitta Baral . 2007. Mining gene-disease relationships from biomedical literature: weighting protein-protein interactions and connectivity measures . In Biocomputing 2007 . World Scientific , 28-39. Graciela Gonzalez, Juan C Uribe, Luis Tari, Colleen Brophy, and Chitta Baral. 2007. Mining gene-disease relationships from biomedical literature: weighting protein-protein interactions and connectivity measures. In Biocomputing 2007. World Scientific, 28-39."},{"key":"e_1_3_2_1_20_1","volume-title":"PREDICT: a method for inferring novel drug indications with application to personalized medicine. Molecular systems biology 7, 1","author":"Gottlieb Assaf","year":"2011","unstructured":"Assaf Gottlieb , Gideon Y Stein , Eytan Ruppin , and Roded Sharan . 2011. PREDICT: a method for inferring novel drug indications with application to personalized medicine. Molecular systems biology 7, 1 ( 2011 ), 496. Assaf Gottlieb, Gideon Y Stein, Eytan Ruppin, and Roded Sharan. 2011. PREDICT: a method for inferring novel drug indications with application to personalized medicine. Molecular systems biology 7, 1 (2011), 496."},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_21_1","DOI":"10.1038\/nrd.2017.178"},{"unstructured":"Hiroyuki Kasai and Bamdev Mishra. 2016. Low-rank tensor completion: a Riemannian manifold preconditioning approach. In ICML.   Hiroyuki Kasai and Bamdev Mishra. 2016. Low-rank tensor completion: a Riemannian manifold preconditioning approach. In ICML.","key":"e_1_3_2_1_22_1"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_23_1","DOI":"10.1137\/07070111X"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_24_1","DOI":"10.1371\/journal.pone.0027175"},{"key":"e_1_3_2_1_25_1","volume-title":"A survey of current trends in computational drug repositioning. Briefings in bioinformatics 17, 1","author":"Li Jiao","year":"2015","unstructured":"Jiao Li , Si Zheng , Bin Chen , Atul J Butte , S Joshua Swamidass , and Zhiyong Lu. 2015. A survey of current trends in computational drug repositioning. Briefings in bioinformatics 17, 1 ( 2015 ), 2-12. Jiao Li, Si Zheng, Bin Chen, Atul J Butte, S Joshua Swamidass, and Zhiyong Lu. 2015. A survey of current trends in computational drug repositioning. Briefings in bioinformatics 17, 1 (2015), 2-12."},{"doi-asserted-by":"crossref","unstructured":"Craig W Lindsley. 2014. New statistics on the cost of new drug development and the trouble with CNS drugs.  Craig W Lindsley. 2014. New statistics on the cost of new drug development and the trouble with CNS drugs.","key":"e_1_3_2_1_26_1","DOI":"10.1021\/cn500298z"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_27_1","DOI":"10.1109\/TPAMI.2012.39"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_28_1","DOI":"10.1109\/TIP.2016.2553459"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_29_1","DOI":"10.1007\/s10618-012-0280-z"},{"key":"e_1_3_2_1_30_1","volume-title":"Ricardo BC Prud&ecir;ncio, and Ivan G Costa","author":"Nascimento Andre\u00b4 CA","year":"2016","unstructured":"Andre\u00b4 CA Nascimento , Ricardo BC Prud&ecir;ncio, and Ivan G Costa . 2016 . A multiple kernel learning algorithm for drug-target interaction prediction. BMC bioinformatics 17, 1 (2016), 46. Andre\u00b4 CA Nascimento, Ricardo BC Prud&ecir;ncio, and Ivan G Costa. 2016. A multiple kernel learning algorithm for drug-target interaction prediction. BMC bioinformatics 17, 1 (2016), 46."},{"unstructured":"Andrew Y Ng Michael I Jordan and Yair Weiss. 2002. On spectral clustering: Analysis and an algorithm. In NIPS.   Andrew Y Ng Michael I Jordan and Yair Weiss. 2002. On spectral clustering: Analysis and an algorithm. In NIPS.","key":"e_1_3_2_1_31_1"},{"key":"e_1_3_2_1_32_1","volume-title":"Proceedings of the 2013 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies. 168-178","author":"Paul Michael J","year":"2013","unstructured":"Michael J Paul and Mark Dredze . 2013 . Drug extraction from the web: Summarizing drug experiences with multi-dimensional topic models . In Proceedings of the 2013 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies. 168-178 . Michael J Paul and Mark Dredze. 2013. Drug extraction from the web: Summarizing drug experiences with multi-dimensional topic models. In Proceedings of the 2013 Conference of the North American Chapter of the Association for Computational Linguistics: Human Language Technologies. 168-178."},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_33_1","DOI":"10.1371\/journal.pone.0023084"},{"key":"e_1_3_2_1_34_1","volume-title":"Alexandra M Schnoes, Tobias Wittkop, Artem Sokolov, Kiley Graim, Christopher Funk, Karin Verspoor","author":"Radivojac Predrag","year":"2013","unstructured":"Predrag Radivojac , Wyatt T Clark , Tal Ronnen Oron , Alexandra M Schnoes, Tobias Wittkop, Artem Sokolov, Kiley Graim, Christopher Funk, Karin Verspoor , Asa Ben-Hur, 2013 . A large-scale evaluation of computational protein function prediction. Nature methods 10, 3 (2013), 221. Predrag Radivojac, Wyatt T Clark, Tal Ronnen Oron, Alexandra M Schnoes, Tobias Wittkop, Artem Sokolov, Kiley Graim, Christopher Funk, Karin Verspoor, Asa Ben-Hur, 2013. A large-scale evaluation of computational protein function prediction. Nature methods 10, 3 (2013), 221."},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_35_1","DOI":"10.1016\/j.jbi.2016.09.004"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_36_1","DOI":"10.1145\/1557019.1557100"},{"key":"e_1_3_2_1_37_1","volume-title":"A comprehensive map of molecular drug targets. Nature reviews Drug discovery 16, 1","author":"Santos Rita","year":"2017","unstructured":"Rita Santos , Oleg Ursu , Anna Gaulton , A Patr\u00edcia Bento , Ramesh S Donadi , Cristian G Bologa , Anneli Karlsson , Bissan Al-Lazikani , Anne Hersey , Tudor I Oprea , 2017. A comprehensive map of molecular drug targets. Nature reviews Drug discovery 16, 1 ( 2017 ), 19. Rita Santos, Oleg Ursu, Anna Gaulton, A Patr\u00edcia Bento, Ramesh S Donadi, Cristian G Bologa, Anneli Karlsson, Bissan Al-Lazikani, Anne Hersey, Tudor I Oprea, 2017. A comprehensive map of molecular drug targets. Nature reviews Drug discovery 16, 1 (2017), 19."},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_38_1","DOI":"10.1016\/j.jbi.2014.11.002"},{"doi-asserted-by":"crossref","unstructured":"Qiong Wang Junbin Gao and Hong Li. 2017. Grassmannian manifold optimization assisted sparse spectral clustering. In CVPR.  Qiong Wang Junbin Gao and Hong Li. 2017. Grassmannian manifold optimization assisted sparse spectral clustering. In CVPR.","key":"e_1_3_2_1_39_1","DOI":"10.1109\/CVPR.2017.335"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_40_1","DOI":"10.1093\/bioinformatics\/btu403"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_41_1","DOI":"10.1145\/2783258.2783395"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_42_1","DOI":"10.1093\/bioinformatics\/btn162"},{"unstructured":"Hongyi Zhang Sashank J Reddi and Suvrit Sra. 2016. Riemannian SVRG: Fast stochastic optimization on Riemannian manifolds. In NIPS.   Hongyi Zhang Sashank J Reddi and Suvrit Sra. 2016. Riemannian SVRG: Fast stochastic optimization on Riemannian manifolds. In NIPS.","key":"e_1_3_2_1_43_1"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_44_1","DOI":"10.1145\/3038912.3052678"},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_45_1","DOI":"10.1145\/2487575.2487670"},{"key":"e_1_3_2_1_46_1","volume-title":"Modeling polypharmacy side effects with graph convolutional networks. Bioinformatics","author":"Zitnik Marinka","year":"2018","unstructured":"Marinka Zitnik , Monica Agrawal , and Jure Leskovec . 2018. Modeling polypharmacy side effects with graph convolutional networks. Bioinformatics ( 2018 ). Marinka Zitnik, Monica Agrawal, and Jure Leskovec. 2018. Modeling polypharmacy side effects with graph convolutional networks. Bioinformatics (2018)."},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_47_1","DOI":"10.1145\/3178876.3186050"}],"event":{"sponsor":["IW3C2 International World Wide Web Conference Committee"],"acronym":"WWW '19","name":"WWW '19: The Web Conference","location":"San Francisco CA USA"},"container-title":["The World Wide Web Conference"],"original-title":[],"link":[{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/3308558.3313476","content-type":"unspecified","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/dl.acm.org\/doi\/pdf\/10.1145\/3308558.3313476","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,6,18]],"date-time":"2025-06-18T01:02:18Z","timestamp":1750208538000},"score":1,"resource":{"primary":{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/3308558.3313476"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2019,5,13]]},"references-count":47,"alternative-id":["10.1145\/3308558.3313476","10.1145\/3308558"],"URL":"https:\/\/doi.org\/10.1145\/3308558.3313476","relation":{},"subject":[],"published":{"date-parts":[[2019,5,13]]},"assertion":[{"value":"2019-05-13","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}