{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,10]],"date-time":"2025-11-10T21:09:21Z","timestamp":1762808961595,"version":"3.41.0"},"publisher-location":"New York, NY, USA","reference-count":26,"publisher":"ACM","license":[{"start":{"date-parts":[[2020,7,26]],"date-time":"2020-07-26T00:00:00Z","timestamp":1595721600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by-sa\/4.0\/"}],"funder":[{"name":"National Institute of Mental Health of the National Institutes of Health","award":["5-R24-MH114793-03"],"award-info":[{"award-number":["5-R24-MH114793-03"]}]}],"content-domain":{"domain":["dl.acm.org"],"crossmark-restriction":true},"short-container-title":[],"published-print":{"date-parts":[[2020,7,26]]},"DOI":"10.1145\/3311790.3396653","type":"proceedings-article","created":{"date-parts":[[2020,7,22]],"date-time":"2020-07-22T04:34:20Z","timestamp":1595392460000},"page":"1-7","update-policy":"https:\/\/doi.org\/10.1145\/crossmark-policy","source":"Crossref","is-referenced-by-count":12,"title":["Cyberinfrastructure of a Multi-Petabyte Microscopy Resource for Neuroscience Research"],"prefix":"10.1145","author":[{"given":"Kathy","family":"Benninger","sequence":"first","affiliation":[{"name":"Carnegie Mellon University, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Greg","family":"Hood","sequence":"additional","affiliation":[{"name":"Carnegie Mellon University, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Derek","family":"Simmel","sequence":"additional","affiliation":[{"name":"Carnegie Mellon University, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Luke","family":"Tuite","sequence":"additional","affiliation":[{"name":"Carnegie Mellon University, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Arthur","family":"Wetzel","sequence":"additional","affiliation":[{"name":"Carnegie Mellon University, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Alexander","family":"Ropelewski","sequence":"additional","affiliation":[{"name":"Carnegie Mellon University, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Simon","family":"Watkins","sequence":"additional","affiliation":[{"name":"University of Pittsburgh, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Alan","family":"Watson","sequence":"additional","affiliation":[{"name":"University of Pittsburgh, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Marcel","family":"Bruchez","sequence":"additional","affiliation":[{"name":"Carnegie Mellon University, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"320","published-online":{"date-parts":[[2020,7,26]]},"reference":[{"key":"e_1_3_2_2_1_1","unstructured":"Adobe. 2020. TIFF. https:\/\/www.adobe.io\/open\/standards\/TIFF.html  Adobe. 2020. TIFF. https:\/\/www.adobe.io\/open\/standards\/TIFF.html"},{"key":"e_1_3_2_2_2_1","unstructured":"Allen Institute. 2020. Brain Cell Data Center (BCDC). https:\/\/biccn.org\/  Allen Institute. 2020. Brain Cell Data Center (BCDC). https:\/\/biccn.org\/"},{"key":"e_1_3_2_2_3_1","unstructured":"Amazon Web Services. 2020. Amazon S3 Simple Storage Service pricing. https:\/\/aws.amazon.com\/s3\/pricing\/  Amazon Web Services. 2020. Amazon S3 Simple Storage Service pricing. https:\/\/aws.amazon.com\/s3\/pricing\/"},{"key":"e_1_3_2_2_4_1","doi-asserted-by":"publisher","DOI":"10.22323\/1.351.0031"},{"key":"e_1_3_2_2_5_1","unstructured":"Brian Behlendorf. 2011. ZFS on Linux for Lustre. http:\/\/cdn.opensfs.org\/wp-content\/uploads\/2012\/12\/1130-1200_Brian_Benhlendorf_LUG11_ZFS_on_Linux_for_Lustre.pdf  Brian Behlendorf. 2011. ZFS on Linux for Lustre. http:\/\/cdn.opensfs.org\/wp-content\/uploads\/2012\/12\/1130-1200_Brian_Benhlendorf_LUG11_ZFS_on_Linux_for_Lustre.pdf"},{"key":"e_1_3_2_2_6_1","unstructured":"Brain Image Library. 2020. Brain Image Library: A public resource enabling researchers to deposit analyze mine share and interact with large brain image datasets. http:\/\/www.brainimagelibrary.org\/  Brain Image Library. 2020. Brain Image Library: A public resource enabling researchers to deposit analyze mine share and interact with large brain image datasets. http:\/\/www.brainimagelibrary.org\/"},{"key":"e_1_3_2_2_7_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0165-0270(98)00091-0"},{"key":"e_1_3_2_2_8_1","unstructured":"Energy Sciences Network (ESnet). 2020. Science DMZ. https:\/\/fasterdata.es.net\/science-dmz\/  Energy Sciences Network (ESnet). 2020. Science DMZ. https:\/\/fasterdata.es.net\/science-dmz\/"},{"key":"e_1_3_2_2_9_1","unstructured":"GO FAIR. 2020. FAIR Principles. https:\/\/www.go-fair.org\/fair-principles\/  GO FAIR. 2020. FAIR Principles. https:\/\/www.go-fair.org\/fair-principles\/"},{"key":"e_1_3_2_2_10_1","unstructured":"David Hart and Ken Hackworth. 2019. XSEDE Resource Allocation Committee (XRAC) Reviewer Manual. https:\/\/www.ideals.illinois.edu\/handle\/2142\/104685  David Hart and Ken Hackworth. 2019. XSEDE Resource Allocation Committee (XRAC) Reviewer Manual. https:\/\/www.ideals.illinois.edu\/handle\/2142\/104685"},{"key":"e_1_3_2_2_11_1","unstructured":"International DOI Foundation. 2020. Digital Object Identifier System. https:\/\/www.doi.org\/  International DOI Foundation. 2020. Digital Object Identifier System. https:\/\/www.doi.org\/"},{"key":"e_1_3_2_2_12_1","unstructured":"Joint Photographic Experts Group. 2020. JPEG - JPEG 2000. https:\/\/jpeg.org\/jpeg2000\/  Joint Photographic Experts Group. 2020. JPEG - JPEG 2000. https:\/\/jpeg.org\/jpeg2000\/"},{"key":"e_1_3_2_2_13_1","doi-asserted-by":"publisher","DOI":"10.1083\/jcb.201004104"},{"key":"e_1_3_2_2_14_1","unstructured":"lustre.org. 2020. Lustre. http:\/\/lustre.org  lustre.org. 2020. Lustre. http:\/\/lustre.org"},{"key":"e_1_3_2_2_15_1","unstructured":"Mechdyne Corporation. 2020. TGX - High Performance Remote Desktop. https:\/\/tgxremotedesktop.com\/  Mechdyne Corporation. 2020. TGX - High Performance Remote Desktop. https:\/\/tgxremotedesktop.com\/"},{"key":"e_1_3_2_2_16_1","unstructured":"National Institutes of Health. 2020. Brain Initiative. https:\/\/braininitiative.nih.gov\/  National Institutes of Health. 2020. Brain Initiative. https:\/\/braininitiative.nih.gov\/"},{"key":"e_1_3_2_2_17_1","doi-asserted-by":"publisher","DOI":"10.1145\/2792745.2792775"},{"key":"e_1_3_2_2_18_1","volume-title":"Extensible visualization and analysis for multidimensional images using Vaa3D. Nature Protocols 9, 1 (01","author":"Peng Hanchuan","year":"2014","unstructured":"Hanchuan Peng , Alessandro Bria , Zhi Zhou , Giulio Iannello , and Fuhui Long . 2014. Extensible visualization and analysis for multidimensional images using Vaa3D. Nature Protocols 9, 1 (01 Jan 2014 ), 193\u2013208. https:\/\/doi.org\/10.1038\/nprot.2014.011 10.1038\/nprot.2014.011 Hanchuan Peng, Alessandro Bria, Zhi Zhou, Giulio Iannello, and Fuhui Long. 2014. Extensible visualization and analysis for multidimensional images using Vaa3D. Nature Protocols 9, 1 (01 Jan 2014), 193\u2013208. https:\/\/doi.org\/10.1038\/nprot.2014.011"},{"key":"e_1_3_2_2_19_1","volume-title":"V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets. Nature Biotechnology 28, 4 (01","author":"Peng Hanchuan","year":"2010","unstructured":"Hanchuan Peng , Zongcai Ruan , Fuhui Long , Julie\u00a0 H. Simpson , and Eugene\u00a0 W. Myers . 2010. V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets. Nature Biotechnology 28, 4 (01 Apr 2010 ), 348\u2013353. https:\/\/doi.org\/10.1038\/nbt.1612 10.1038\/nbt.1612 Hanchuan Peng, Zongcai Ruan, Fuhui Long, Julie\u00a0H. Simpson, and Eugene\u00a0W. Myers. 2010. V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets. Nature Biotechnology 28, 4 (01 Apr 2010), 348\u2013353. https:\/\/doi.org\/10.1038\/nbt.1612"},{"key":"e_1_3_2_2_20_1","volume-title":"Virtual finger boosts three-dimensional imaging and microsurgery as well as terabyte","author":"Peng Hanchuan","year":"2014","unstructured":"Hanchuan Peng , Jianyong Tang , Hang Xiao , Alessandro Bria , Jianlong Zhou , Victoria Butler , Zhi Zhou , Paloma\u00a0 T. Gonzalez-Bellido , Seung\u00a0 W. Oh , Jichao Chen , Ananya Mitra , Richard\u00a0 W. Tsien , Hongkui Zeng , Giorgio\u00a0 A. Ascoli , Giulio Iannello , Michael Hawrylycz , Eugene Myers , and Fuhui Long . 2014. Virtual finger boosts three-dimensional imaging and microsurgery as well as terabyte volume image visualization and analysis. Nature Communications 5 , 1 (11 Jul 2014 ), 4342. https:\/\/doi.org\/10.1038\/ncomms5342 10.1038\/ncomms5342 Hanchuan Peng, Jianyong Tang, Hang Xiao, Alessandro Bria, Jianlong Zhou, Victoria Butler, Zhi Zhou, Paloma\u00a0T. Gonzalez-Bellido, Seung\u00a0W. Oh, Jichao Chen, Ananya Mitra, Richard\u00a0W. Tsien, Hongkui Zeng, Giorgio\u00a0A. Ascoli, Giulio Iannello, Michael Hawrylycz, Eugene Myers, and Fuhui Long. 2014. Virtual finger boosts three-dimensional imaging and microsurgery as well as terabyte volume image visualization and analysis. Nature Communications 5, 1 (11 Jul 2014), 4342. https:\/\/doi.org\/10.1038\/ncomms5342"},{"key":"e_1_3_2_2_21_1","unstructured":"seqFISH. 2020. Technology \u2013 seqFISH. https:\/\/www.seqfish.com\/technology  seqFISH. 2020. Technology \u2013 seqFISH. https:\/\/www.seqfish.com\/technology"},{"key":"e_1_3_2_2_22_1","doi-asserted-by":"publisher","DOI":"10.1109\/MCSE.2014.80"},{"key":"e_1_3_2_2_23_1","unstructured":"x2go.org. 2020. X2Go - everywhere@home. https:\/\/wiki.x2go.org\/doku.php  x2go.org. 2020. X2Go - everywhere@home. https:\/\/wiki.x2go.org\/doku.php"},{"key":"e_1_3_2_2_24_1","unstructured":"XSEDE. 2018. Getting Started - XSEDE. https:\/\/www.xsede.org\/for-users\/getting-started  XSEDE. 2018. Getting Started - XSEDE. https:\/\/www.xsede.org\/for-users\/getting-started"},{"key":"e_1_3_2_2_25_1","unstructured":"ZFS on Linux. 2020. FAQ \u2013 zfsonlinux\/zfs Wiki. https:\/\/github.com\/zfsonlinux\/zfs\/wiki\/FAQ  ZFS on Linux. 2020. FAQ \u2013 zfsonlinux\/zfs Wiki. https:\/\/github.com\/zfsonlinux\/zfs\/wiki\/FAQ"},{"key":"e_1_3_2_2_26_1","unstructured":"Xiaowei Zhuang. 2020. Zhuang Research Lab. http:\/\/zhuang.harvard.edu\/merfish.html  Xiaowei Zhuang. 2020. Zhuang Research Lab. http:\/\/zhuang.harvard.edu\/merfish.html"}],"event":{"name":"PEARC '20: Practice and Experience in Advanced Research Computing","sponsor":["SIGAPP ACM Special Interest Group on Applied Computing","SIGHPC ACM Special Interest Group on High Performance Computing, Special Interest Group on High Performance Computing"],"location":"Portland OR USA","acronym":"PEARC '20"},"container-title":["Practice and Experience in Advanced Research Computing"],"original-title":[],"link":[{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/3311790.3396653","content-type":"unspecified","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/dl.acm.org\/doi\/pdf\/10.1145\/3311790.3396653","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,6,18]],"date-time":"2025-06-18T00:25:31Z","timestamp":1750206331000},"score":1,"resource":{"primary":{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/3311790.3396653"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020,7,26]]},"references-count":26,"alternative-id":["10.1145\/3311790.3396653","10.1145\/3311790"],"URL":"https:\/\/doi.org\/10.1145\/3311790.3396653","relation":{},"subject":[],"published":{"date-parts":[[2020,7,26]]},"assertion":[{"value":"2020-07-26","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}