{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,21]],"date-time":"2026-03-21T04:51:58Z","timestamp":1774068718575,"version":"3.50.1"},"publisher-location":"New York, NY, USA","reference-count":10,"publisher":"ACM","license":[{"start":{"date-parts":[[2020,7,26]],"date-time":"2020-07-26T00:00:00Z","timestamp":1595721600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.acm.org\/publications\/policies\/copyright_policy#Background"}],"content-domain":{"domain":["dl.acm.org"],"crossmark-restriction":true},"short-container-title":[],"published-print":{"date-parts":[[2020,7,26]]},"DOI":"10.1145\/3311790.3399617","type":"proceedings-article","created":{"date-parts":[[2020,7,22]],"date-time":"2020-07-22T04:34:20Z","timestamp":1595392460000},"page":"469-472","update-policy":"https:\/\/doi.org\/10.1145\/crossmark-policy","source":"Crossref","is-referenced-by-count":1,"title":["Online Single-cell RNA-seq Data Denoising with Transfer Learning"],"prefix":"10.1145","author":[{"given":"Bowei","family":"Kang","sequence":"first","affiliation":[{"name":"University of Chicago, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Eroma","family":"Abeysinghe","sequence":"additional","affiliation":[{"name":"Indiana University - Cyberinfrastructure Integration Research Center, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Divyansh","family":"Agarwal","sequence":"additional","affiliation":[{"name":"University of Pennsylvania - Graduate Group in Genomics and Computational Biology, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Quanli","family":"Wang","sequence":"additional","affiliation":[{"name":"Duke University - Department of Statistical Science, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sudhakar","family":"Pamidighantam","sequence":"additional","affiliation":[{"name":"Indiana University - Cyberinfrastructure Integration Research Center, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mo","family":"Huang","sequence":"additional","affiliation":[{"name":"University of Pennsylvania - Wharton School Department of Statistics, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Nancy R.","family":"Zhang","sequence":"additional","affiliation":[{"name":"University of Pennsylvania - Wharton School Department of Statistics, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jingshu","family":"Wang","sequence":"additional","affiliation":[{"name":"University of Chicago, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"320","published-online":{"date-parts":[[2020,7,26]]},"reference":[{"key":"e_1_3_2_1_1_1","unstructured":"[n.d.]. HCA data portal: census of immune cells. https:\/\/data.humancellatlas.org\/explore\/projects\/cc95ff89-2e68-4a08-a234-480eca21ce79. Accessed: 2020-02-23.  [n.d.]. HCA data portal: census of immune cells. https:\/\/data.humancellatlas.org\/explore\/projects\/cc95ff89-2e68-4a08-a234-480eca21ce79. Accessed: 2020-02-23."},{"key":"e_1_3_2_1_2_1","volume-title":"Dimensionality reduction for visualizing single-cell data using UMAP. Nature biotechnology 37, 1","author":"Becht Etienne","year":"2019"},{"key":"e_1_3_2_1_3_1","volume-title":"Accounting for technical noise in single-cell RNA-seq experiments. Nature methods 10, 11","author":"Brennecke Philip","year":"2013"},{"key":"e_1_3_2_1_4_1","volume-title":"SAVER: gene expression recovery for single-cell RNA sequencing. Nature methods 15, 7","author":"Huang Mo","year":"2018"},{"key":"e_1_3_2_1_5_1","volume-title":"Supporting Science Gateways Using Apache Airavata and SciGaP Services. In In Proceedings of the Practice and Experience on Advanced Research Computing. 99","author":"Pierce"},{"key":"e_1_3_2_1_6_1","doi-asserted-by":"publisher","DOI":"10.1145\/2110486.2110490"},{"key":"e_1_3_2_1_8_1","volume-title":"Single-cell RNA-seq: advances and future challenges. Nucleic acids research 42, 14","author":"Saliba Antoine-Emmanuel","year":"2014"},{"key":"e_1_3_2_1_9_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.cell.2019.05.031"},{"key":"e_1_3_2_1_10_1","volume-title":"14th IEEE\/ACM International Symposium","author":"Kanewala","year":"2014"},{"key":"e_1_3_2_1_11_1","volume-title":"Data denoising with transfer learning in single-cell transcriptomics. Nature methods 16, 9","author":"Wang Jingshu","year":"2019"}],"event":{"name":"PEARC '20: Practice and Experience in Advanced Research Computing","location":"Portland OR USA","acronym":"PEARC '20","sponsor":["SIGAPP ACM Special Interest Group on Applied Computing","SIGHPC ACM Special Interest Group on High Performance Computing, Special Interest Group on High Performance Computing"]},"container-title":["Practice and Experience in Advanced Research Computing"],"original-title":[],"link":[{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/3311790.3399617","content-type":"unspecified","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/dl.acm.org\/doi\/pdf\/10.1145\/3311790.3399617","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,6,18]],"date-time":"2025-06-18T00:25:32Z","timestamp":1750206332000},"score":1,"resource":{"primary":{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/3311790.3399617"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020,7,26]]},"references-count":10,"alternative-id":["10.1145\/3311790.3399617","10.1145\/3311790"],"URL":"https:\/\/doi.org\/10.1145\/3311790.3399617","relation":{},"subject":[],"published":{"date-parts":[[2020,7,26]]},"assertion":[{"value":"2020-07-26","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}