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Staring , Fast parallel image registration on CPU and GPU for diagnostic classification of Alzheimer's disease. Frontiers in neuroinformatics 7 , 2014 , 50. D. P. Shamonin, E. E. Bron, B. P. F. Lelieveldt, M. Smits, S. Klein, and M. Staring, Fast parallel image registration on CPU and GPU for diagnostic classification of Alzheimer's disease. Frontiers in neuroinformatics 7, 2014, 50."},{"doi-asserted-by":"publisher","key":"e_1_3_2_1_33_1","DOI":"10.3390\/diagnostics3020271"},{"key":"e_1_3_2_1_34_1","volume-title":"Metrics for evaluating 3D medical image segmentation: analysis, selection, and tool. BMC medical imaging 15, 1","author":"Taha A. A.","year":"2015","unstructured":"A. A. Taha and A. Hanbury , Metrics for evaluating 3D medical image segmentation: analysis, selection, and tool. BMC medical imaging 15, 1 , 2015 , 29. A. A. Taha and A. Hanbury, Metrics for evaluating 3D medical image segmentation: analysis, selection, and tool. BMC medical imaging 15, 1, 2015, 29."},{"key":"e_1_3_2_1_35_1","volume-title":"Evaluation metrics for medical organ segmentation and lesion detection. in cloud-based benchmarking of medical image analysis","author":"Taha A. A.","year":"2017","unstructured":"A. A. Taha and A. Hanbury ., Evaluation metrics for medical organ segmentation and lesion detection. in cloud-based benchmarking of medical image analysis . Springer , 87--105, 2017 . A. A. Taha and A. Hanbury., Evaluation metrics for medical organ segmentation and lesion detection. in cloud-based benchmarking of medical image analysis. Springer, 87--105, 2017."},{"key":"e_1_3_2_1_36_1","doi-asserted-by":"crossref","first-page":"4","DOI":"10.1002\/jmri.1195","article-title":"Functional cardiac MR imaging with steady-state free precession (SSFP) significantly improves endocardial border delineation without contrast agents","volume":"14","author":"Thiele H.","year":"2001","unstructured":"H. Thiele , E. Nagel , I. Paetsch , B. Schnackenburg , A. Born- stedt, M. Kouwenhoven , A. Wahl , G. Schuler , and E. Fleck , Functional cardiac MR imaging with steady-state free precession (SSFP) significantly improves endocardial border delineation without contrast agents . Journal of Magnetic Resonance Imaging: An Official Journal of the International Society for Magnetic Resonance in Medicine , 14 , 4 , 2001 , 362--367. H. Thiele, E. Nagel, I. Paetsch, B. Schnackenburg, A. Born- stedt, M. Kouwenhoven, A. Wahl, G. Schuler, and E. Fleck, Functional cardiac MR imaging with steady-state free precession (SSFP) significantly improves endocardial border delineation without contrast agents. 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Kikinis , Multimodal volume registration by maximization of mutual information. Medical image analysis, 1 , 1, 1996 , 35--51. W. M Wells, P. Viola, H. Atsumi, S. Nakajima, and R. Kikinis, Multimodal volume registration by maximization of mutual information. Medical image analysis, 1, 1, 1996, 35--51."},{"key":"e_1_3_2_1_39_1","volume-title":"Interactive medical image segmentation using snake and multiscale curve editing, Computational and mathematical methods in medicine","author":"Zhou W.","year":"2013","unstructured":"W. Zhou and Y. Q. Xie , Interactive medical image segmentation using snake and multiscale curve editing, Computational and mathematical methods in medicine 2013 . W. Zhou and Y. Q. 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