{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,6,18]],"date-time":"2025-06-18T04:27:03Z","timestamp":1750220823947,"version":"3.41.0"},"publisher-location":"New York, NY, USA","reference-count":58,"publisher":"ACM","license":[{"start":{"date-parts":[[2019,9,25]],"date-time":"2019-09-25T00:00:00Z","timestamp":1569369600000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.acm.org\/publications\/policies\/copyright_policy#Background"}],"content-domain":{"domain":["dl.acm.org"],"crossmark-restriction":true},"short-container-title":[],"published-print":{"date-parts":[[2019,9,25]]},"DOI":"10.1145\/3345312.3345476","type":"proceedings-article","created":{"date-parts":[[2019,10,7]],"date-time":"2019-10-07T12:21:06Z","timestamp":1570450866000},"page":"1-7","update-policy":"https:\/\/doi.org\/10.1145\/crossmark-policy","source":"Crossref","is-referenced-by-count":2,"title":["Agent Based Modeling of the Rhizobiome with Molecular Communication and Game Theory"],"prefix":"10.1145","author":[{"given":"Apostolos","family":"Almpanis","sequence":"first","affiliation":[{"name":"School of Engineering, University of Warwick, Coventry, UK"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Christophe","family":"Corre","sequence":"additional","affiliation":[{"name":"School of Life Sciences, University of Warwick, Gibbet Hill, Coventry, UK"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Adam","family":"Noel","sequence":"additional","affiliation":[{"name":"School of Engineering, University of Warwick, Coventry, UK"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"320","published-online":{"date-parts":[[2019,9,25]]},"reference":[{"key":"e_1_3_2_1_1_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.nancom.2011.04.004"},{"key":"e_1_3_2_1_2_1","volume-title":"Evolutionary game theory using agent-based methods. Physics of Life reviews 19","author":"Adami Christoph","year":"2016","unstructured":"Christoph Adami , Jory Schossau , and Arend Hintze . 2016. Evolutionary game theory using agent-based methods. Physics of Life reviews 19 ( 2016 ), 1--26. https:\/\/doi.org\/10\/gftqbz Christoph Adami, Jory Schossau, and Arend Hintze. 2016. Evolutionary game theory using agent-based methods. Physics of Life reviews 19 (2016), 1--26. https:\/\/doi.org\/10\/gftqbz"},{"key":"e_1_3_2_1_3_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.comnet.2008.04.001"},{"key":"e_1_3_2_1_4_1","doi-asserted-by":"publisher","DOI":"10.1098\/rsif.2009.0203"},{"key":"e_1_3_2_1_5_1","doi-asserted-by":"crossref","unstructured":"R. Axelrod and W. D. Hamilton. 1981. The Evolution of Cooperation. Science 211 4489 (1981) 1390--1396. arXiv:7466396  R. Axelrod and W. D. Hamilton. 1981. The Evolution of Cooperation. Science 211 4489 (1981) 1390--1396. arXiv:7466396","DOI":"10.1126\/science.7466396"},{"key":"e_1_3_2_1_6_1","doi-asserted-by":"publisher","DOI":"10.1088\/1478-3975\/7\/4\/046013"},{"key":"e_1_3_2_1_7_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.tplants.2013.11.006"},{"volume-title":"Random Walks in Biology","author":"Berg Howard C.","key":"e_1_3_2_1_8_1","unstructured":"Howard C. Berg . 1993. Random Walks in Biology . Princeton University Press . Howard C. Berg. 1993. Random Walks in Biology. Princeton University Press."},{"key":"e_1_3_2_1_9_1","volume-title":"Co-Evolving Cellular Automata for Morphogenesis. Discrete & Continuous Dynamical Systems","author":"Beros Achilles","year":"2019","unstructured":"Achilles Beros , Monique Chyba , and Kari Noe . 2019. Co-Evolving Cellular Automata for Morphogenesis. Discrete & Continuous Dynamical Systems ( 2019 ). Achilles Beros, Monique Chyba, and Kari Noe. 2019. Co-Evolving Cellular Automata for Morphogenesis. Discrete & Continuous Dynamical Systems (2019)."},{"key":"e_1_3_2_1_10_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0191-2615(99)00052-1"},{"key":"e_1_3_2_1_11_1","volume-title":"Principles of assessing bacterial susceptibility to antibiotics using the agar diffusion method. 61, 6","author":"Bonev Boyan","year":"2008","unstructured":"Boyan Bonev , James Hooper , and Judica\u00c3\u0144l Parisot . 2008. Principles of assessing bacterial susceptibility to antibiotics using the agar diffusion method. 61, 6 ( 2008 ), 1295--1301. https:\/\/doi.org\/10\/df23d5 00279. Boyan Bonev, James Hooper, and Judica\u00c3\u0144l Parisot. 2008. Principles of assessing bacterial susceptibility to antibiotics using the agar diffusion method. 61, 6 (2008), 1295--1301. https:\/\/doi.org\/10\/df23d5 00279."},{"key":"e_1_3_2_1_12_1","volume-title":"Proceedings of the Royal Society: A Mathematical, Physical and Engineering Science 474","author":"Cangiani A.","year":"2018","unstructured":"A. Cangiani , E. H. Georgoulis , A. Yu. Morozov , and O.J. Sutton . 2018. Revealing new dynamical patterns in a reaction\u00e2\u00c2\u015ediffusion model with cyclic competition via a novel computational framework . Proceedings of the Royal Society: A Mathematical, Physical and Engineering Science 474 , 2213 ( 2018 ), 20170608. https:\/\/doi.org\/10\/gdp3jk A. Cangiani, E. H. Georgoulis, A. Yu. Morozov, and O.J. Sutton. 2018. Revealing new dynamical patterns in a reaction\u00e2\u00c2\u015ediffusion model with cyclic competition via a novel computational framework. Proceedings of the Royal Society: A Mathematical, Physical and Engineering Science 474, 2213 (2018), 20170608. https:\/\/doi.org\/10\/gdp3jk"},{"volume-title":"Cellular Automata: A","author":"Chopard Bastien","key":"e_1_3_2_1_13_1","unstructured":"Bastien Chopard . 2009. Cellular Automata Modeling of Physical Systems . In Cellular Automata: A Volume in the Encyclopedia of Complexity and Systems Science, Second Edition, Andrew Adamatzky (Ed.). Springer US, New York, NY, 657-- 689 . https:\/\/doi.org\/10.1007\/978-1-4939-8700-9_57 10.1007\/978-1-4939-8700-9_57 Bastien Chopard. 2009. Cellular Automata Modeling of Physical Systems. In Cellular Automata: A Volume in the Encyclopedia of Complexity and Systems Science, Second Edition, Andrew Adamatzky (Ed.). Springer US, New York, NY, 657--689. https:\/\/doi.org\/10.1007\/978-1-4939-8700-9_57"},{"key":"e_1_3_2_1_14_1","doi-asserted-by":"publisher","DOI":"10.1007\/s10441-010-9118-5"},{"key":"#cr-split#-e_1_3_2_1_15_1.1","doi-asserted-by":"crossref","unstructured":"Keith C. Clarke. 2014. Cellular Automata and Agent-Based Models. (2014) 1217--1233. https:\/\/doi.org\/10.1007\/978-3-642-23430-9_63 00000. 10.1007\/978-3-642-23430-9_63","DOI":"10.1007\/978-3-642-23430-9_63"},{"key":"#cr-split#-e_1_3_2_1_15_1.2","doi-asserted-by":"crossref","unstructured":"Keith C. Clarke. 2014. Cellular Automata and Agent-Based Models. (2014) 1217--1233. https:\/\/doi.org\/10.1007\/978-3-642-23430-9_63 00000.","DOI":"10.1007\/978-3-642-23430-9_63"},{"key":"e_1_3_2_1_16_1","doi-asserted-by":"publisher","DOI":"10.1111\/j.1462-2920.2010.02384.x"},{"key":"e_1_3_2_1_17_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.chembiol.2010.02.010"},{"key":"e_1_3_2_1_18_1","volume-title":"Eckford","author":"Farsad Nariman","year":"2013","unstructured":"Nariman Farsad , Weisi Guo , and Andrew W . Eckford . 2013 . Tabletop Molecular Communication: Text Messages through Chemical Signals. PLoS ONE 8, 12 (2013). https:\/\/doi.org\/10\/gd3tc2 Nariman Farsad, Weisi Guo, and Andrew W. Eckford. 2013. Tabletop Molecular Communication: Text Messages through Chemical Signals. PLoS ONE 8, 12 (2013). https:\/\/doi.org\/10\/gd3tc2"},{"key":"e_1_3_2_1_19_1","doi-asserted-by":"publisher","DOI":"10.1109\/COMST.2016.2527741"},{"key":"e_1_3_2_1_20_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.nancom.2015.08.004"},{"key":"e_1_3_2_1_21_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1419038112"},{"key":"e_1_3_2_1_22_1","doi-asserted-by":"publisher","DOI":"10.1038\/nmicrobiol.2016.48"},{"key":"e_1_3_2_1_23_1","doi-asserted-by":"publisher","DOI":"10.1007\/s00572-018-0857-5"},{"key":"e_1_3_2_1_24_1","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.68.5.2391-2396.2002"},{"key":"e_1_3_2_1_25_1","doi-asserted-by":"publisher","DOI":"10.1094\/MPMI-09-10-0208"},{"key":"e_1_3_2_1_26_1","volume-title":"The Evolution of Antibiotic Production Rate in a Spatial Model of Bacterial Competition. PLoS ONE 13, 10","author":"Kosakowski Jakub","year":"2018","unstructured":"Jakub Kosakowski , Prateek Verma , Supratim Sengupta , and Paul G Higgs . 2018. The Evolution of Antibiotic Production Rate in a Spatial Model of Bacterial Competition. PLoS ONE 13, 10 ( 2018 ). https:\/\/doi.org\/10\/gfkrzj Jakub Kosakowski, Prateek Verma, Supratim Sengupta, and Paul G Higgs. 2018. The Evolution of Antibiotic Production Rate in a Spatial Model of Bacterial Competition. PLoS ONE 13, 10 (2018). https:\/\/doi.org\/10\/gfkrzj"},{"volume-title":"Theory of Games and Economic Behavior","author":"Kuhn Harold William","key":"e_1_3_2_1_27_1","unstructured":"Harold William Kuhn , John von Neumann , Oskar Morgenstern , and Ariel Rubinstein . 2007. Theory of Games and Economic Behavior . Princeton University Press . Harold William Kuhn, John von Neumann, Oskar Morgenstern, and Ariel Rubinstein. 2007. Theory of Games and Economic Behavior. Princeton University Press."},{"key":"e_1_3_2_1_28_1","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.71.12.7819-7830.2005"},{"key":"e_1_3_2_1_29_1","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1523580113"},{"key":"e_1_3_2_1_30_1","doi-asserted-by":"publisher","DOI":"10.1146\/annurev-phyto-080614-120149"},{"key":"e_1_3_2_1_31_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.simpat.2013.11.004"},{"key":"e_1_3_2_1_32_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-018-05703-6"},{"key":"e_1_3_2_1_33_1","doi-asserted-by":"publisher","DOI":"10.1109\/NANO.2005.1500804"},{"key":"e_1_3_2_1_34_1","doi-asserted-by":"crossref","unstructured":"J. M. Nava-Sede\u00c3\u015bo H. Hatzikirou R. Klages and A. Deutsch. 2017. Cellular automaton models for time-correlated random walks: derivation and analysis. Scientific Reports 7 1 (2017). https:\/\/doi.org\/10\/gctht6  J. M. Nava-Sede\u00c3\u015bo H. Hatzikirou R. Klages and A. Deutsch. 2017. Cellular automaton models for time-correlated random walks: derivation and analysis. Scientific Reports 7 1 (2017). https:\/\/doi.org\/10\/gctht6","DOI":"10.1038\/s41598-017-17317-x"},{"key":"e_1_3_2_1_35_1","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.00393-08"},{"key":"e_1_3_2_1_36_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.nancom.2017.02.002"},{"volume-title":"2017 IEEE Information Theory Workshop (ITW) (2017-11)","author":"Noel A.","key":"e_1_3_2_1_37_1","unstructured":"A. Noel , Y. Fang , N. Yang , D. Makrakis , and A. W. Eckford . 2017. Effect of local population uncertainty on cooperation in bacteria . In 2017 IEEE Information Theory Workshop (ITW) (2017-11) . IEEE, 334--338. https:\/\/doi.org\/10\/gft7fd A. Noel, Y. Fang, N. Yang, D. Makrakis, and A. W. Eckford. 2017. Effect of local population uncertainty on cooperation in bacteria. In 2017 IEEE Information Theory Workshop (ITW) (2017-11). IEEE, 334--338. https:\/\/doi.org\/10\/gft7fd"},{"key":"e_1_3_2_1_38_1","volume-title":"Emergence of cooperation and evolutionary stability in finite populations. Nature 428, 6983","author":"Nowak Martin A.","year":"2004","unstructured":"Martin A. Nowak , Akira Sasaki , Christine Taylor , and Drew Fudenberg . 2004. Emergence of cooperation and evolutionary stability in finite populations. Nature 428, 6983 ( 2004 ), 646. https:\/\/doi.org\/10.1038\/nature02414 10.1038\/nature02414 Martin A. Nowak, Akira Sasaki, Christine Taylor, and Drew Fudenberg. 2004. Emergence of cooperation and evolutionary stability in finite populations. Nature 428, 6983 (2004), 646. https:\/\/doi.org\/10.1038\/nature02414"},{"key":"e_1_3_2_1_39_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41467-018-07946-9"},{"key":"e_1_3_2_1_40_1","doi-asserted-by":"publisher","DOI":"10.1038\/nrmicro1987"},{"key":"e_1_3_2_1_41_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.cogsys.2018.04.012"},{"key":"e_1_3_2_1_42_1","volume-title":"S\u00c3ijel","author":"Prindle Arthur","year":"2015","unstructured":"Arthur Prindle , Jintao Liu , Munehiro Asally , San Ly , Jordi Garcia-Ojalvo , and G\u00c3ijrol M . S\u00c3ijel . 2015 . Ion Channels Enable Electrical Communication in Bacterial Communities. Nature 527, 7576 (2015), 59--63. Arthur Prindle, Jintao Liu, Munehiro Asally, San Ly, Jordi Garcia-Ojalvo, and G\u00c3ijrol M. S\u00c3ijel. 2015. Ion Channels Enable Electrical Communication in Bacterial Communities. Nature 527, 7576 (2015), 59--63."},{"key":"e_1_3_2_1_43_1","volume-title":"Isolation of Uncultured Bacteria from Antarctica Using Long Incubation Periods and Low Nutritional Media. Frontiers in Microbiology 8","author":"Pulschen Andre A.","year":"2017","unstructured":"Andre A. Pulschen , Amanda G. Bendia , Ashwana D. Fricker , Vivian H. Pellizari , Douglas Galante , and Fabio Rodrigues . 2017. Isolation of Uncultured Bacteria from Antarctica Using Long Incubation Periods and Low Nutritional Media. Frontiers in Microbiology 8 ( 2017 ). https:\/\/doi.org\/10.3389\/fmicb.2017.01346 10.3389\/fmicb.2017.01346 Andre A. Pulschen, Amanda G. Bendia, Ashwana D. Fricker, Vivian H. Pellizari, Douglas Galante, and Fabio Rodrigues. 2017. Isolation of Uncultured Bacteria from Antarctica Using Long Incubation Periods and Low Nutritional Media. Frontiers in Microbiology 8 (2017). https:\/\/doi.org\/10.3389\/fmicb.2017.01346"},{"key":"e_1_3_2_1_44_1","volume-title":"Paper Disk-Agar Diffusion Assay of Penicillin in the Presence of Streptomycin. 6, 5","author":"Raahave D.","year":"1974","unstructured":"D. Raahave . 1974. Paper Disk-Agar Diffusion Assay of Penicillin in the Presence of Streptomycin. 6, 5 ( 1974 ), 603--605. https:\/\/doi.org\/10\/gfkn28 D. Raahave. 1974. Paper Disk-Agar Diffusion Assay of Penicillin in the Presence of Streptomycin. 6, 5 (1974), 603--605. https:\/\/doi.org\/10\/gfkn28"},{"volume-title":"FOURTH EDITION.","author":"Rasmusen Eric","key":"e_1_3_2_1_45_1","unstructured":"Eric Rasmusen . 1994. GAMES AND INFORMATION , FOURTH EDITION. Vol. 15 . Blacwell publishing, Cambridge, MA. 577 pages. Eric Rasmusen. 1994. GAMES AND INFORMATION, FOURTH EDITION. Vol. 15. Blacwell publishing, Cambridge, MA. 577 pages."},{"key":"e_1_3_2_1_46_1","doi-asserted-by":"publisher","DOI":"10.1007\/s00248-017-1054-3"},{"key":"e_1_3_2_1_47_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41396-017-0035-3"},{"key":"e_1_3_2_1_48_1","doi-asserted-by":"publisher","DOI":"10.1006\/game.2000.0794"},{"key":"e_1_3_2_1_49_1","doi-asserted-by":"crossref","unstructured":"J. Maynard Smith and G. R. Price. 1973. The Logic of Animal Conflict. Nature 246 5427 (1973) 15.  J. Maynard Smith and G. R. Price. 1973. The Logic of Animal Conflict. Nature 246 5427 (1973) 15.","DOI":"10.1038\/246015a0"},{"key":"e_1_3_2_1_50_1","volume-title":"Interspecies Interactions Stimulate Diversification of the Streptomyces Coelicolor Secreted Metabolome. mBio 4, 4","author":"Traxler Matthew F.","year":"2013","unstructured":"Matthew F. Traxler , Jeramie D. Watrous , Theodore Alexandrov , Pieter C. Dorrestein , and Roberto Kolter . 2013. Interspecies Interactions Stimulate Diversification of the Streptomyces Coelicolor Secreted Metabolome. mBio 4, 4 ( 2013 ), e00459-13. arXiv:23963177 Matthew F. Traxler, Jeramie D. Watrous, Theodore Alexandrov, Pieter C. Dorrestein, and Roberto Kolter. 2013. Interspecies Interactions Stimulate Diversification of the Streptomyces Coelicolor Secreted Metabolome. mBio 4, 4 (2013), e00459-13. arXiv:23963177"},{"key":"e_1_3_2_1_51_1","volume-title":"Improved Agar Diffusion Method for Detecting Residual Antimicrobial Agents. 64, 3","author":"Tsai Chin-En","year":"2001","unstructured":"Chin-En Tsai and Fusao Kondo . 2001. Improved Agar Diffusion Method for Detecting Residual Antimicrobial Agents. 64, 3 ( 2001 ), 361--366. https:\/\/doi.org\/10.4315\/0362-028X-64.3.361 10.4315\/0362-028X-64.3.361 Chin-En Tsai and Fusao Kondo. 2001. Improved Agar Diffusion Method for Detecting Residual Antimicrobial Agents. 64, 3 (2001), 361--366. https:\/\/doi.org\/10.4315\/0362-028X-64.3.361"},{"key":"e_1_3_2_1_52_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.tplants.2016.01.005"},{"key":"e_1_3_2_1_53_1","doi-asserted-by":"publisher","DOI":"10.1016\/S0167-8191(97)00081-1"},{"volume-title":"Cellular Automata And Complexity: Collected Papers","author":"Wolfram Stephen","key":"e_1_3_2_1_54_1","unstructured":"Stephen Wolfram . 2018. Cellular Automata And Complexity: Collected Papers . CRC Press . https:\/\/doi.org\/10.1201\/9780429494093 10.1201\/9780429494093 Stephen Wolfram. 2018. Cellular Automata And Complexity: Collected Papers. CRC Press. https:\/\/doi.org\/10.1201\/9780429494093"},{"key":"e_1_3_2_1_55_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.simpat.2014.09.002"},{"key":"e_1_3_2_1_56_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.copbio.2016.04.002"},{"key":"e_1_3_2_1_57_1","doi-asserted-by":"publisher","DOI":"10.1038\/s41564-018-0129-3"}],"event":{"name":"NANOCOM '19: The Sixth Annual ACM International Conference on Nanoscale Computing and Communication","sponsor":["SIGARCH ACM Special Interest Group on Computer Architecture"],"location":"Dublin Ireland","acronym":"NANOCOM '19"},"container-title":["Proceedings of the Sixth Annual ACM International Conference on Nanoscale Computing and Communication"],"original-title":[],"link":[{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/3345312.3345476","content-type":"unspecified","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/dl.acm.org\/doi\/pdf\/10.1145\/3345312.3345476","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,6,17]],"date-time":"2025-06-17T23:13:18Z","timestamp":1750201998000},"score":1,"resource":{"primary":{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/3345312.3345476"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2019,9,25]]},"references-count":58,"alternative-id":["10.1145\/3345312.3345476","10.1145\/3345312"],"URL":"https:\/\/doi.org\/10.1145\/3345312.3345476","relation":{},"subject":[],"published":{"date-parts":[[2019,9,25]]},"assertion":[{"value":"2019-09-25","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}