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Cell 157, 2 (2014), 369--381.","journal-title":"Cell"},{"unstructured":"Dali Han Bin Zhang Wei Chang Ailin Song Yanwei Wang Peng Zhao Yan Wang Zhongjin Yue and Panfeng Shang. [n. d.]. A Pan-Cancer Analysis of the Hemoglobin Subunit Beta (HBB) in Human Tumors. Available at SSRN 4245565 ([n. d.]).  Dali Han Bin Zhang Wei Chang Ailin Song Yanwei Wang Peng Zhao Yan Wang Zhongjin Yue and Panfeng Shang. [n. d.]. A Pan-Cancer Analysis of the Hemoglobin Subunit Beta (HBB) in Human Tumors. Available at SSRN 4245565 ([n. d.]).","key":"e_1_3_2_1_23_1"},{"key":"e_1_3_2_1_24_1","volume-title":"Genome-wide map of regulatory interactions in the human genome. Genome research 24, 12","author":"Heidari Nastaran","year":"2014","unstructured":"Nastaran Heidari , Douglas H Phanstiel , Chao He , Fabian Grubert , Fereshteh Jahanbani , Maya Kasowski , Michael Q Zhang , and Michael P Snyder . 2014. Genome-wide map of regulatory interactions in the human genome. Genome research 24, 12 ( 2014 ), 1905--1917. Nastaran Heidari, Douglas H Phanstiel, Chao He, Fabian Grubert, Fereshteh Jahanbani, Maya Kasowski, Michael Q Zhang, and Michael P Snyder. 2014. Genome-wide map of regulatory interactions in the human genome. Genome research 24, 12 (2014), 1905--1917."},{"key":"e_1_3_2_1_25_1","doi-asserted-by":"crossref","first-page":"283","DOI":"10.1016\/j.cell.2018.03.042","article-title":"The cancer genome atlas: creating lasting value beyond its data","volume":"173","author":"Hutter Carolyn","year":"2018","unstructured":"Carolyn Hutter and Jean Claude Zenklusen . 2018 . The cancer genome atlas: creating lasting value beyond its data . Cell 173 , 2 (2018), 283 -- 285 . Carolyn Hutter and Jean Claude Zenklusen. 2018. The cancer genome atlas: creating lasting value beyond its data. Cell 173, 2 (2018), 283--285.","journal-title":"Cell"},{"key":"e_1_3_2_1_26_1","volume-title":"GABA B receptor regulates proliferation in the high-grade chondrosarcoma cell line OUMS-27 via apoptotic pathways. 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Role of hemoglobin alpha and hemoglobin beta in non-small-cell lung cancer based on bioinformatics analysis . Molecular Carcinogenesis 61 , 6 (2022), 587 -- 602 . Ning Kang, Wen-Jia Qiu, Bin Wang, Dong-fang Tang, and Xiao-Yong Shen. 2022. Role of hemoglobin alpha and hemoglobin beta in non-small-cell lung cancer based on bioinformatics analysis. Molecular Carcinogenesis 61, 6 (2022), 587--602.","journal-title":"Molecular Carcinogenesis"},{"key":"e_1_3_2_1_28_1","volume-title":"DeepSurv: personalized treatment recommender system using a Cox proportional hazards deep neural network. BMC medical research methodology 18, 1","author":"Katzman Jared L","year":"2018","unstructured":"Jared L Katzman , Uri Shaham , Alexander Cloninger , Jonathan Bates , Tingting Jiang , and Yuval Kluger . 2018. DeepSurv: personalized treatment recommender system using a Cox proportional hazards deep neural network. BMC medical research methodology 18, 1 ( 2018 ), 1--12. Jared L Katzman, Uri Shaham, Alexander Cloninger, Jonathan Bates, Tingting Jiang, and Yuval Kluger. 2018. DeepSurv: personalized treatment recommender system using a Cox proportional hazards deep neural network. BMC medical research methodology 18, 1 (2018), 1--12."},{"key":"e_1_3_2_1_29_1","doi-asserted-by":"crossref","first-page":"D38","DOI":"10.1093\/nar\/gkaa1078","article-title":"3DIV update for 2021: a comprehensive resource of 3D genome and 3D cancer genome","volume":"49","author":"Kim Kyukwang","year":"2021","unstructured":"Kyukwang Kim , Insu Jang , Mooyoung Kim , Jinhyuk Choi , Min-Seo Kim , Byungwook Lee , and Inkyung Jung . 2021 . 3DIV update for 2021: a comprehensive resource of 3D genome and 3D cancer genome . Nucleic Acids Research 49 , D1 (2021), D38 -- D46 . Kyukwang Kim, Insu Jang, Mooyoung Kim, Jinhyuk Choi, Min-Seo Kim, Byungwook Lee, and Inkyung Jung. 2021. 3DIV update for 2021: a comprehensive resource of 3D genome and 3D cancer genome. Nucleic Acids Research 49, D1 (2021), D38--D46.","journal-title":"Nucleic Acids Research"},{"key":"e_1_3_2_1_30_1","volume-title":"FAN-C: a feature-rich framework for the analysis and visualisation of chromosome conformation capture data. Genome biology 21, 1","author":"Kruse Kai","year":"2020","unstructured":"Kai Kruse , Clemens B Hug , and Juan M Vaquerizas . 2020. FAN-C: a feature-rich framework for the analysis and visualisation of chromosome conformation capture data. Genome biology 21, 1 ( 2020 ), 1--19. Kai Kruse, Clemens B Hug, and Juan M Vaquerizas. 2020. FAN-C: a feature-rich framework for the analysis and visualisation of chromosome conformation capture data. Genome biology 21, 1 (2020), 1--19."},{"doi-asserted-by":"crossref","unstructured":"Anshul Kundaje Wouter Meuleman Jason Ernst Misha Bilenky Angela Yen Alireza Heravi-Moussavi Pouya Kheradpour Zhizhuo Zhang Jianrong Wang Michael J Ziller etal 2015. Integrative analysis of 111 reference human epigenomes. Nature 518 7539 (2015) 317--330.  Anshul Kundaje Wouter Meuleman Jason Ernst Misha Bilenky Angela Yen Alireza Heravi-Moussavi Pouya Kheradpour Zhizhuo Zhang Jianrong Wang Michael J Ziller et al. 2015. Integrative analysis of 111 reference human epigenomes. Nature 518 7539 (2015) 317--330.","key":"e_1_3_2_1_31_1","DOI":"10.1038\/nature14248"},{"key":"e_1_3_2_1_32_1","volume-title":"Altered cell adhesion and glycosylation promote cancer immune suppression and metastasis. Frontiers in immunology 10","author":"L\u00e4ubli Heinz","year":"2019","unstructured":"Heinz L\u00e4ubli and Lubor Borsig . 2019. Altered cell adhesion and glycosylation promote cancer immune suppression and metastasis. Frontiers in immunology 10 ( 2019 ), 2120. Heinz L\u00e4ubli and Lubor Borsig. 2019. Altered cell adhesion and glycosylation promote cancer immune suppression and metastasis. Frontiers in immunology 10 (2019), 2120."},{"key":"e_1_3_2_1_33_1","volume-title":"Fast and accurate short read alignment with Burrows-Wheeler transform. bioinformatics 25, 14","author":"Li Heng","year":"2009","unstructured":"Heng Li and Richard Durbin . 2009. Fast and accurate short read alignment with Burrows-Wheeler transform. bioinformatics 25, 14 ( 2009 ), 1754--1760. Heng Li and Richard Durbin. 2009. Fast and accurate short read alignment with Burrows-Wheeler transform. bioinformatics 25, 14 (2009), 1754--1760."},{"key":"e_1_3_2_1_34_1","doi-asserted-by":"crossref","first-page":"2704","DOI":"10.3748\/wjg.v18.i21.2704","article-title":"GABA stimulates human hepatocellular carcinoma growth through overexpressed GABAA receptor theta subunit","volume":"18","author":"Li Yue-Hui","year":"2012","unstructured":"Yue-Hui Li , Yan Liu , Yan-Dong Li , Yan-Hong Liu , Feng Li , Qiang Ju , Ping-Li Xie , and Guan-Cheng Li . 2012 . GABA stimulates human hepatocellular carcinoma growth through overexpressed GABAA receptor theta subunit . World Journal of Gastroenterology: WJG 18 , 21 (2012), 2704 . Yue-Hui Li, Yan Liu, Yan-Dong Li, Yan-Hong Liu, Feng Li, Qiang Ju, Ping-Li Xie, and Guan-Cheng Li. 2012. GABA stimulates human hepatocellular carcinoma growth through overexpressed GABAA receptor theta subunit. World Journal of Gastroenterology: WJG 18, 21 (2012), 2704.","journal-title":"World Journal of Gastroenterology: WJG"},{"key":"e_1_3_2_1_35_1","volume-title":"Louise Williams, Maxim Imakaev, Tobias Ragoczy, Agnes Telling, Ido Amit, Bryan R Lajoie, Peter J Sabo, Michael O Dorschner, et al.","author":"Lieberman-Aiden Erez","year":"2009","unstructured":"Erez Lieberman-Aiden , Nynke L Van Berkum , Louise Williams, Maxim Imakaev, Tobias Ragoczy, Agnes Telling, Ido Amit, Bryan R Lajoie, Peter J Sabo, Michael O Dorschner, et al. 2009 . Comprehensive mapping of long-range interactions reveals folding principles of the human genome. science 326, 5950 (2009), 289--293. Erez Lieberman-Aiden, Nynke L Van Berkum, Louise Williams, Maxim Imakaev, Tobias Ragoczy, Agnes Telling, Ido Amit, Bryan R Lajoie, Peter J Sabo, Michael O Dorschner, et al. 2009. Comprehensive mapping of long-range interactions reveals folding principles of the human genome. science 326, 5950 (2009), 289--293."},{"key":"e_1_3_2_1_36_1","volume-title":"Systematic inference and comparison of multi-scale chromatin sub-compartments connects spatial organization to cell phenotypes. Nature communications 12, 1","author":"Liu Yuanlong","year":"2021","unstructured":"Yuanlong Liu , Luca Nanni , Stephanie Sungalee , Marie Zufferey , Daniele Tavernari , Marco Mina , Stefano Ceri , Elisa Oricchio , and Giovanni Ciriello . 2021. Systematic inference and comparison of multi-scale chromatin sub-compartments connects spatial organization to cell phenotypes. Nature communications 12, 1 ( 2021 ), 2439. Yuanlong Liu, Luca Nanni, Stephanie Sungalee, Marie Zufferey, Daniele Tavernari, Marco Mina, Stefano Ceri, Elisa Oricchio, and Giovanni Ciriello. 2021. Systematic inference and comparison of multi-scale chromatin sub-compartments connects spatial organization to cell phenotypes. Nature communications 12, 1 (2021), 2439."},{"key":"e_1_3_2_1_37_1","doi-asserted-by":"crossref","first-page":"600615","DOI":"10.3389\/fgene.2020.600615","article-title":"Chromatin remodelers in the 3D nuclear compartment","volume":"11","author":"Maga\u00f1a-Acosta Mauro","year":"2020","unstructured":"Mauro Maga\u00f1a-Acosta and Viviana Valadez-Graham . 2020 . Chromatin remodelers in the 3D nuclear compartment . Frontiers in Genetics 11 (2020), 600615 . Mauro Maga\u00f1a-Acosta and Viviana Valadez-Graham. 2020. Chromatin remodelers in the 3D nuclear compartment. 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Biomolecules 9, 10 (2019), 567.","journal-title":"Biomolecules"},{"key":"e_1_3_2_1_39_1","doi-asserted-by":"crossref","first-page":"1178","DOI":"10.1093\/jnci\/djy148","article-title":"BRCA1 and BRCA2 gene mutations and colorectal cancer risk: systematic review and meta-analysis","volume":"110","author":"Oh Mok","year":"2018","unstructured":"Mok Oh , Ali McBride , Seongseok Yun , Sandipan Bhattacharjee , Marion Slack , Jennifer R Martin , Joanne Jeter , and Ivo Abraham . 2018 . BRCA1 and BRCA2 gene mutations and colorectal cancer risk: systematic review and meta-analysis . JNCI: Journal of the National Cancer Institute 110 , 11 (2018), 1178 -- 1189 . Mok Oh, Ali McBride, Seongseok Yun, Sandipan Bhattacharjee, Marion Slack, Jennifer R Martin, Joanne Jeter, and Ivo Abraham. 2018. BRCA1 and BRCA2 gene mutations and colorectal cancer risk: systematic review and meta-analysis. 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Sarah B Reiff Andrew J Schroeder Koray K\u0131rl\u0131 Andrea Cosolo Clara Bakker Soohyun Lee Alexander D Veit Alexander K Balashov Carl Vitzthum William Ronchetti et al. 2022. The 4D Nucleome Data Portal as a resource for searching and visualizing curated nucleomics data. Nature communications 13 1 (2022) 1--11.","key":"e_1_3_2_1_43_1","DOI":"10.1038\/s41467-022-34458-4"},{"key":"e_1_3_2_1_44_1","volume-title":"Federico Abascal, Jeremiah A Wala, Ofer Shapira, Grace Tiao, Henrik Hornsh\u00f8j, Julian M Hess, Randi Istrup Juul, Ziao Lin, et al.","author":"Rheinbay Esther","year":"2020","unstructured":"Esther Rheinbay , Morten Muhlig Nielsen , Federico Abascal, Jeremiah A Wala, Ofer Shapira, Grace Tiao, Henrik Hornsh\u00f8j, Julian M Hess, Randi Istrup Juul, Ziao Lin, et al. 2020 . Analyses of non-coding somatic drivers in 2,658 cancer whole genomes. Nature 578, 7793 (2020), 102--111. Esther Rheinbay, Morten Muhlig Nielsen, Federico Abascal, Jeremiah A Wala, Ofer Shapira, Grace Tiao, Henrik Hornsh\u00f8j, Julian M Hess, Randi Istrup Juul, Ziao Lin, et al. 2020. Analyses of non-coding somatic drivers in 2,658 cancer whole genomes. Nature 578, 7793 (2020), 102--111."},{"key":"e_1_3_2_1_45_1","doi-asserted-by":"crossref","first-page":"789","DOI":"10.1038\/s41576-018-0060-8","article-title":"Organizational principles of 3D genome architecture","volume":"19","author":"Jordan Rowley M","year":"2018","unstructured":"M Jordan Rowley and Victor G Corces . 2018 . Organizational principles of 3D genome architecture . Nature Reviews Genetics 19 , 12 (2018), 789 -- 800 . M Jordan Rowley and Victor G Corces. 2018. Organizational principles of 3D genome architecture. Nature Reviews Genetics 19, 12 (2018), 789--800.","journal-title":"Nature Reviews Genetics"},{"key":"e_1_3_2_1_46_1","volume-title":"Mehdi Keddache, Christopher Mayhew, et al.","author":"Salomonis Nathan","year":"2016","unstructured":"Nathan Salomonis , Phillip J Dexheimer , Larsson Omberg , Robin Schroll , Stacy Bush , Jeffrey Huo , Lynn Schriml , Shannan Ho Sui , Mehdi Keddache, Christopher Mayhew, et al. 2016 . Integrated genomic analysis of diverse induced pluripotent stem cells from the progenitor cell biology consortium. Stem cell reports 7, 1 (2016), 110--125. Nathan Salomonis, Phillip J Dexheimer, Larsson Omberg, Robin Schroll, Stacy Bush, Jeffrey Huo, Lynn Schriml, Shannan Ho Sui, Mehdi Keddache, Christopher Mayhew, et al. 2016. Integrated genomic analysis of diverse induced pluripotent stem cells from the progenitor cell biology consortium. Stem cell reports 7, 1 (2016), 110--125."},{"doi-asserted-by":"crossref","unstructured":"Anthony D Schmitt Ming Hu Inkyung Jung Zheng Xu Yunjiang Qiu Catherine L Tan Yun Li Shin Lin Yiing Lin Cathy L Barr etal 2016. A compendium of chromatin contact maps reveals spatially active regions in the human genome. Cell reports 17 8 (2016) 2042--2059.  Anthony D Schmitt Ming Hu Inkyung Jung Zheng Xu Yunjiang Qiu Catherine L Tan Yun Li Shin Lin Yiing Lin Cathy L Barr et al. 2016. A compendium of chromatin contact maps reveals spatially active regions in the human genome. Cell reports 17 8 (2016) 2042--2059.","key":"e_1_3_2_1_47_1","DOI":"10.1016\/j.celrep.2016.10.061"},{"volume-title":"Hi-C Data Analysis","author":"Song Fan","unstructured":"Fan Song , Jie Xu , Jesse Dixon , and Feng Yue . 2022. Analysis of Hi-C Data for Discovery of Structural Variations in Cancer . In Hi-C Data Analysis . Springer , 143--161. Fan Song, Jie Xu, Jesse Dixon, and Feng Yue. 2022. Analysis of Hi-C Data for Discovery of Structural Variations in Cancer. In Hi-C Data Analysis. Springer, 143--161.","key":"e_1_3_2_1_48_1"},{"key":"e_1_3_2_1_49_1","volume-title":"Transcription factors and 3D genome conformation in cell-fate decisions. Nature 569, 7756","author":"Stadhouders Ralph","year":"2019","unstructured":"Ralph Stadhouders , Guillaume J Filion , and Thomas Graf . 2019. Transcription factors and 3D genome conformation in cell-fate decisions. Nature 569, 7756 ( 2019 ), 345--354. Ralph Stadhouders, Guillaume J Filion, and Thomas Graf. 2019. Transcription factors and 3D genome conformation in cell-fate decisions. Nature 569, 7756 (2019), 345--354."},{"volume-title":"Seminars in Cell & Developmental Biology","author":"Umlauf David","unstructured":"David Umlauf and Rapha\u00ebl Mourad . 2019. The 3D genome: From fundamental principles to disease and cancer . In Seminars in Cell & Developmental Biology , Vol. 90 . Elsevier , 128--137. David Umlauf and Rapha\u00ebl Mourad. 2019. The 3D genome: From fundamental principles to disease and cancer. In Seminars in Cell & Developmental Biology, Vol. 90. Elsevier, 128--137.","key":"e_1_3_2_1_50_1"},{"key":"e_1_3_2_1_51_1","first-page":"e1869","article-title":"Hi-C: a method to study the three-dimensional architecture of genomes","volume":"39","author":"Van Berkum Nynke L","year":"2010","unstructured":"Nynke L Van Berkum , Erez Lieberman-Aiden , Louise Williams , Maxim Imakaev , Andreas Gnirke , Leonid A Mirny , Job Dekker , and Eric S Lander . 2010 . Hi-C: a method to study the three-dimensional architecture of genomes . JoVE (Journal of Visualized Experiments) 39 (2010), e1869 . Nynke L Van Berkum, Erez Lieberman-Aiden, Louise Williams, Maxim Imakaev, Andreas Gnirke, Leonid A Mirny, Job Dekker, and Eric S Lander. 2010. Hi-C: a method to study the three-dimensional architecture of genomes. JoVE (Journal of Visualized Experiments) 39 (2010), e1869.","journal-title":"JoVE (Journal of Visualized Experiments)"},{"key":"e_1_3_2_1_52_1","first-page":"1","article-title":"Cell cycle checkpoint in cancer: a therapeutically targetable double-edged sword","volume":"35","author":"Visconti Roberta","year":"2016","unstructured":"Roberta Visconti , Rosa Della Monica , and Domenico Grieco . 2016 . Cell cycle checkpoint in cancer: a therapeutically targetable double-edged sword . Journal of Experimental & Clinical Cancer Research 35 , 1 (2016), 1 -- 8 . Roberta Visconti, Rosa Della Monica, and Domenico Grieco. 2016. Cell cycle checkpoint in cancer: a therapeutically targetable double-edged sword. Journal of Experimental & Clinical Cancer Research 35, 1 (2016), 1--8.","journal-title":"Journal of Experimental & Clinical Cancer Research"},{"key":"e_1_3_2_1_53_1","volume-title":"Spatial organization of chromatin domains and compartments in single chromosomes. Science 353, 6299","author":"Wang Siyuan","year":"2016","unstructured":"Siyuan Wang , Jun-Han Su , Brian J Beliveau , Bogdan Bintu , Jeffrey R Moffitt , Chao-ting Wu, and Xiaowei Zhuang . 2016. Spatial organization of chromatin domains and compartments in single chromosomes. Science 353, 6299 ( 2016 ), 598--602. Siyuan Wang, Jun-Han Su, Brian J Beliveau, Bogdan Bintu, Jeffrey R Moffitt, Chao-ting Wu, and Xiaowei Zhuang. 2016. Spatial organization of chromatin domains and compartments in single chromosomes. Science 353, 6299 (2016), 598--602."},{"key":"e_1_3_2_1_54_1","doi-asserted-by":"crossref","first-page":"352","DOI":"10.1002\/path.3022","article-title":"The cell cycle and cancer","volume":"226","author":"Williams Gareth H","year":"2012","unstructured":"Gareth H Williams and Kai Stoeber . 2012 . The cell cycle and cancer . The Journal of pathology 226 , 2 (2012), 352 -- 364 . Gareth H Williams and Kai Stoeber. 2012. The cell cycle and cancer. The Journal of pathology 226, 2 (2012), 352--364.","journal-title":"The Journal of pathology"},{"key":"e_1_3_2_1_55_1","volume-title":"Oana Ursu, Koon-Kiu Yan, Tao Yang, Abhijit Chakraborty, Arya Kaul, Bryan R Lajoie, Fan Song, et al.","author":"Yard\u0131mc\u0131 Galip G\u00fcrkan","year":"2019","unstructured":"Galip G\u00fcrkan Yard\u0131mc\u0131 , Hakan Ozadam , Michael EG Sauria , Oana Ursu, Koon-Kiu Yan, Tao Yang, Abhijit Chakraborty, Arya Kaul, Bryan R Lajoie, Fan Song, et al. 2019 . Measuring the reproducibility and quality of Hi-C data. Genome biology 20, 1 (2019), 1--19. Galip G\u00fcrkan Yard\u0131mc\u0131, Hakan Ozadam, Michael EG Sauria, Oana Ursu, Koon-Kiu Yan, Tao Yang, Abhijit Chakraborty, Arya Kaul, Bryan R Lajoie, Fan Song, et al. 2019. Measuring the reproducibility and quality of Hi-C data. Genome biology 20, 1 (2019), 1--19."},{"key":"e_1_3_2_1_56_1","doi-asserted-by":"crossref","first-page":"674","DOI":"10.1093\/jmcb\/mjaa040","article-title":"Gain-of-function mutant p53 in cancer progression and therapy","volume":"12","author":"Zhang Cen","year":"2020","unstructured":"Cen Zhang , Juan Liu , Dandan Xu , Tianliang Zhang , Wenwei Hu , and Zhaohui Feng . 2020 . Gain-of-function mutant p53 in cancer progression and therapy . Journal of molecular cell biology 12 , 9 (2020), 674 -- 687 . Cen Zhang, Juan Liu, Dandan Xu, Tianliang Zhang, Wenwei Hu, and Zhaohui Feng. 2020. Gain-of-function mutant p53 in cancer progression and therapy. Journal of molecular cell biology 12, 9 (2020), 674--687.","journal-title":"Journal of molecular cell biology"},{"doi-asserted-by":"crossref","unstructured":"Shilu Zhang Deborah Chasman Sara Knaack and Sushmita Roy. 2019. In silico prediction of high-resolution Hi-C interaction matrices. Nature communications 10 1 (2019) 1--18.  Shilu Zhang Deborah Chasman Sara Knaack and Sushmita Roy. 2019. In silico prediction of high-resolution Hi-C interaction matrices. Nature communications 10 1 (2019) 1--18.","key":"e_1_3_2_1_57_1","DOI":"10.1038\/s41467-019-13423-8"},{"key":"e_1_3_2_1_58_1","first-page":"1","article-title":"Expression of gamma-aminobutyric acid receptors on neoplastic growth and prediction of prognosis in non-small cell lung cancer","volume":"11","author":"Zhang Xiaoxue","year":"2013","unstructured":"Xiaoxue Zhang , Rong Zhang , Yuanjie Zheng , Jianfei Shen , Dakai Xiao , Jin Li , Xiaoshun Shi , Liyan Huang , Hailing Tang , Jun Liu , 2013 . Expression of gamma-aminobutyric acid receptors on neoplastic growth and prediction of prognosis in non-small cell lung cancer . Journal of translational medicine 11 , 1 (2013), 1 -- 10 . Xiaoxue Zhang, Rong Zhang, Yuanjie Zheng, Jianfei Shen, Dakai Xiao, Jin Li, Xiaoshun Shi, Liyan Huang, Hailing Tang, Jun Liu, et al. 2013. Expression of gamma-aminobutyric acid receptors on neoplastic growth and prediction of prognosis in non-small cell lung cancer. Journal of translational medicine 11, 1 (2013), 1--10.","journal-title":"Journal of translational medicine"},{"key":"e_1_3_2_1_59_1","volume-title":"Jonathan D Grinstein, Elie N Farah, Eugin Destici, Yunjiang Qiu, Rong Hu, Ah Young Lee, et al.","author":"Zhang Yanxiao","year":"2019","unstructured":"Yanxiao Zhang , Ting Li , Sebastian Preissl , Maria Luisa Amaral , Jonathan D Grinstein, Elie N Farah, Eugin Destici, Yunjiang Qiu, Rong Hu, Ah Young Lee, et al. 2019 . Transcriptionally active HERV-H retrotransposons demarcate topologically associating domains in human pluripotent stem cells. Nature genetics 51, 9 (2019), 1380--1388. Yanxiao Zhang, Ting Li, Sebastian Preissl, Maria Luisa Amaral, Jonathan D Grinstein, Elie N Farah, Eugin Destici, Yunjiang Qiu, Rong Hu, Ah Young Lee, et al. 2019. Transcriptionally active HERV-H retrotransposons demarcate topologically associating domains in human pluripotent stem cells. Nature genetics 51, 9 (2019), 1380--1388."},{"key":"e_1_3_2_1_60_1","article-title":"Principal components analysis in clinical studies","volume":"5","author":"Zhang Zhongheng","year":"2017","unstructured":"Zhongheng Zhang and Adela Castell\u00f3 . 2017 . Principal components analysis in clinical studies . Annals of translational medicine 5 , 17 (2017). Zhongheng Zhang and Adela Castell\u00f3. 2017. Principal components analysis in clinical studies. Annals of translational medicine 5, 17 (2017).","journal-title":"Annals of translational medicine"},{"key":"e_1_3_2_1_61_1","volume-title":"Min Yu, Nezihi Murat Karabacak, Valentine Comaills, Robert Morris, et al.","author":"Zheng Yu","year":"2017","unstructured":"Yu Zheng , David T Miyamoto , Ben S Wittner , James P Sullivan , Nicola Aceto , Nicole Vincent Jordan , Min Yu, Nezihi Murat Karabacak, Valentine Comaills, Robert Morris, et al. 2017 . Expression of \u03b2-globin by cancer cells promotes cell survival during blood-borne dissemination. Nature communications 8, 1 (2017), 1--12. Yu Zheng, David T Miyamoto, Ben S Wittner, James P Sullivan, Nicola Aceto, Nicole Vincent Jordan, Min Yu, Nezihi Murat Karabacak, Valentine Comaills, Robert Morris, et al. 2017. Expression of \u03b2-globin by cancer cells promotes cell survival during blood-borne dissemination. 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