{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,6,19]],"date-time":"2025-06-19T05:02:02Z","timestamp":1750309322427,"version":"3.41.0"},"publisher-location":"New York, NY, USA","reference-count":22,"publisher":"ACM","license":[{"start":{"date-parts":[[2024,4,8]],"date-time":"2024-04-08T00:00:00Z","timestamp":1712534400000},"content-version":"vor","delay-in-days":0,"URL":"https:\/\/www.acm.org\/publications\/policies\/copyright_policy#Background"}],"content-domain":{"domain":["dl.acm.org"],"crossmark-restriction":true},"short-container-title":[],"published-print":{"date-parts":[[2024,4,8]]},"DOI":"10.1145\/3605098.3636017","type":"proceedings-article","created":{"date-parts":[[2024,5,21]],"date-time":"2024-05-21T17:59:16Z","timestamp":1716314356000},"page":"196-203","update-policy":"https:\/\/doi.org\/10.1145\/crossmark-policy","source":"Crossref","is-referenced-by-count":0,"title":["Bridging DNA Storage and Computation: An Integrated Framework for Efficient Biomolecular Data Management"],"prefix":"10.1145","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-9279-962X","authenticated-orcid":false,"given":"Yi-Syuan","family":"Lin","sequence":"first","affiliation":[{"name":"Department of Computer Science, National Tsing Hua University, Hsinchu, Taiwan"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3500-5974","authenticated-orcid":false,"given":"Yu-Pei","family":"Liang","sequence":"additional","affiliation":[{"name":"Department of Computer Science and Information Engineering, National Chung Cheng University, Minxiong, Taiwan"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-1282-2111","authenticated-orcid":false,"given":"Yuan-Hao","family":"Chang","sequence":"additional","affiliation":[{"name":"Institute of Information Science, Academia Sinica, Taipei, Taiwan"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-8356-2495","authenticated-orcid":false,"given":"Wei-Kuan","family":"Shih","sequence":"additional","affiliation":[{"name":"Department of Computer Science, National Tsing Hua University, Hsinchu, Taiwan"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-2391-8127","authenticated-orcid":false,"given":"Wen-Sheng","family":"Lim","sequence":"additional","affiliation":[{"name":"Institute of Information Science, Academia Sinica, Taipei, Taiwan"}]}],"member":"320","published-online":{"date-parts":[[2024,5,21]]},"reference":[{"key":"e_1_3_2_1_1_1","volume-title":"Molecular computation of solutions to combinatorial problems, science 266, 5187","author":"Adleman Leonard M","year":"1994","unstructured":"Leonard M Adleman. 1994. Molecular computation of solutions to combinatorial problems, science 266, 5187 (1994), 1021--1024."},{"key":"e_1_3_2_1_2_1","doi-asserted-by":"publisher","DOI":"10.3390\/electronics9081295"},{"key":"e_1_3_2_1_3_1","doi-asserted-by":"publisher","DOI":"10.3390\/bioengineering4020045"},{"key":"e_1_3_2_1_4_1","volume-title":"OPTICS: Ordering points to identify the clustering structure. ACM Sigmod record 28, 2","author":"Ankerst Mihael","year":"1999","unstructured":"Mihael Ankerst, Markus M Breunig, Hans-Peter Kriegel, and J\u00f6rg Sander. 1999. OPTICS: Ordering points to identify the clustering structure. ACM Sigmod record 28, 2 (1999), 49--60."},{"key":"e_1_3_2_1_5_1","doi-asserted-by":"publisher","DOI":"10.1145\/2872362.2872397"},{"key":"e_1_3_2_1_6_1","doi-asserted-by":"publisher","DOI":"10.1007\/978-3-642-37456-2_14"},{"key":"e_1_3_2_1_7_1","volume-title":"19th USENIX Conference on File and Storage Technologies (FAST 21)","author":"Ceze Luis","year":"2021","unstructured":"Luis Ceze, Karin Strauss, Patrick PC Lee, Fan Xu, Atul Sikaria, Yi Liu, Pavel Zakharov, Cheng He, Jiongzhou Liu, Mike Shuey, et al. 2021. {DNA} Data Storage and {Near-Molecule} Processing for the Yottabyte Era. In 19th USENIX Conference on File and Storage Technologies (FAST 21). 417--429."},{"key":"e_1_3_2_1_8_1","doi-asserted-by":"publisher","unstructured":"Gregory Griffin Alex Holub and Pietro Perona. 2022. Caltech 256. 10.22002\/D1.20087","DOI":"10.22002\/D1.20087"},{"key":"e_1_3_2_1_9_1","doi-asserted-by":"publisher","DOI":"10.1016\/j.humimm.2021.02.012"},{"key":"e_1_3_2_1_10_1","volume-title":"Large-scale de novo DNA synthesis: technologies and applications. Nature methods 11, 5","author":"Kosuri Sriram","year":"2014","unstructured":"Sriram Kosuri and George M Church. 2014. Large-scale de novo DNA synthesis: technologies and applications. Nature methods 11, 5 (2014), 499."},{"key":"e_1_3_2_1_11_1","volume-title":"Programming chemical reaction networks using intramolecular conformational motions of DNA. ACS nano 12, 7","author":"Lai Wei","year":"2018","unstructured":"Wei Lai, Lei Ren, Qian Tang, Xiangmeng Qu, Jiang Li, Lihua Wang, Li Li, Chunhai Fan, and Hao Pei. 2018. Programming chemical reaction networks using intramolecular conformational motions of DNA. ACS nano 12, 7 (2018), 7093--7099."},{"key":"e_1_3_2_1_12_1","doi-asserted-by":"publisher","DOI":"10.1145\/1837274.1837463"},{"key":"e_1_3_2_1_13_1","doi-asserted-by":"publisher","unstructured":"Fei-Fei Li Marco Andreeto Marc'Aurelio Ranzato and Pietro Perona. 2022. Caltech 101. 10.22002\/D1.20086","DOI":"10.22002\/D1.20086"},{"key":"e_1_3_2_1_14_1","doi-asserted-by":"publisher","DOI":"10.1145\/3516482"},{"key":"e_1_3_2_1_15_1","doi-asserted-by":"publisher","DOI":"10.1021\/ja00401a041"},{"key":"e_1_3_2_1_16_1","volume-title":"Reading and writing digital data in DNA. Nature protocols 15, 1","author":"Meiser Linda C","year":"2020","unstructured":"Linda C Meiser, Philipp L Antkowiak, Julian Koch, Weida D Chen, A Xavier Kohll, Wendelin J Stark, Reinhard Heckel, and Robert N Grass. 2020. Reading and writing digital data in DNA. Nature protocols 15, 1 (2020), 86--101."},{"key":"e_1_3_2_1_17_1","volume-title":"High density DNA data storage library via dehydration with digital microfluidic retrieval. Nature communications 10, 1","author":"Newman Sharon","year":"2019","unstructured":"Sharon Newman, Ashley P Stephenson, Max Willsey, Bichlien H Nguyen, Christopher N Takahashi, Karin Strauss, and Luis Ceze. 2019. High density DNA data storage library via dehydration with digital microfluidic retrieval. Nature communications 10, 1 (2019), 1--6."},{"key":"e_1_3_2_1_18_1","doi-asserted-by":"publisher","DOI":"10.1145\/267521.267759"},{"key":"e_1_3_2_1_19_1","volume-title":"Electrowetting-based actuation of droplets for integrated microfluidics. Lab on a Chip 2, 2","author":"Pollack Michael G","year":"2002","unstructured":"Michael G Pollack, Alexander D Shenderov, and Richard B Fair. 2002. Electrowetting-based actuation of droplets for integrated microfluidics. Lab on a Chip 2, 2 (2002), 96--101."},{"key":"e_1_3_2_1_20_1","volume-title":"Fast and compact DNA logic circuits based on single-stranded gates using strand-displacing polymerase. Nature nanotechnology 14, 11","author":"Song Tianqi","year":"2019","unstructured":"Tianqi Song, Abeer Eshra, Shalin Shah, Hieu Bui, Daniel Fu, Ming Yang, Reem Mokhtar, and John Reif. 2019. Fast and compact DNA logic circuits based on single-stranded gates using strand-displacing polymerase. Nature nanotechnology 14, 11 (2019), 1075--1081."},{"key":"e_1_3_2_1_21_1","volume-title":"A rewritable, random-access DNA-based storage system. Scientific reports 5, 1","author":"Tabatabaei Yazdi SM","year":"2015","unstructured":"SM Tabatabaei Yazdi, Yongbo Yuan, Jian Ma, Huimin Zhao, and Olgica Milenkovic. 2015. A rewritable, random-access DNA-based storage system. Scientific reports 5, 1 (2015), 1--10."},{"key":"e_1_3_2_1_22_1","doi-asserted-by":"publisher","DOI":"10.1038\/s42256-022-00502-7"}],"event":{"name":"SAC '24: 39th ACM\/SIGAPP Symposium on Applied Computing","sponsor":["SIGAPP ACM Special Interest Group on Applied Computing"],"location":"Avila Spain","acronym":"SAC '24"},"container-title":["Proceedings of the 39th ACM\/SIGAPP Symposium on Applied Computing"],"original-title":[],"link":[{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/3605098.3636017","content-type":"unspecified","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/dl.acm.org\/doi\/pdf\/10.1145\/3605098.3636017","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,6,19]],"date-time":"2025-06-19T00:03:59Z","timestamp":1750291439000},"score":1,"resource":{"primary":{"URL":"https:\/\/dl.acm.org\/doi\/10.1145\/3605098.3636017"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2024,4,8]]},"references-count":22,"alternative-id":["10.1145\/3605098.3636017","10.1145\/3605098"],"URL":"https:\/\/doi.org\/10.1145\/3605098.3636017","relation":{},"subject":[],"published":{"date-parts":[[2024,4,8]]},"assertion":[{"value":"2024-05-21","order":2,"name":"published","label":"Published","group":{"name":"publication_history","label":"Publication History"}}]}}