{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,14]],"date-time":"2026-05-14T07:17:52Z","timestamp":1778743072090,"version":"3.51.4"},"reference-count":59,"publisher":"IBM","issue":"5\/6","content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["IBM J. Res. &amp; Dev."],"published-print":{"date-parts":[[2016,9]]},"DOI":"10.1147\/jrd.2016.2582598","type":"journal-article","created":{"date-parts":[[2016,9,30]],"date-time":"2016-09-30T14:32:16Z","timestamp":1475245936000},"page":"1:1-1:13","source":"Crossref","is-referenced-by-count":18,"title":["Defining the food microbiome for authentication, safety, and process management"],"prefix":"10.1147","volume":"60","author":[{"given":"B. C.","family":"Weimer","sequence":"first","affiliation":[{"name":"Davis School of Veterinary Medicine, University of California, Davis, CA, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"D. B.","family":"Storey","sequence":"additional","affiliation":[{"name":"Davis School of Veterinary Medicine, University of California, Davis, CA, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"C. A.","family":"Elkins","sequence":"additional","affiliation":[{"name":"Center for Food Safety and Applied Nutrition (CFSAN), Food and Drug Administration (FDA), Laurel, MD, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"R. C.","family":"Baker","sequence":"additional","affiliation":[{"name":"Mars Global Food Safety Center, Mars Incorporated, McLean, VA, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"P.","family":"Markwell","sequence":"additional","affiliation":[{"name":"Food Safety Science, Mars Incorporated, McLean, VA, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"D. D.","family":"Chambliss","sequence":"additional","affiliation":[{"name":"IBM Research, Almaden Research Center, San Jose, CA, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"S. B.","family":"Edlund","sequence":"additional","affiliation":[{"name":"IBM Research, Almaden Research Center, San Jose, CA, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"J. H.","family":"Kaufman","sequence":"additional","affiliation":[{"name":"IBM Research, Almaden Research Center, San Jose, CA, USA"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"3082","reference":[{"key":"ref39","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2014.11.003"},{"key":"ref38","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.01832-06"},{"key":"ref33","doi-asserted-by":"publisher","DOI":"10.1128\/JB.00619-08"},{"key":"ref32","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.1121491109"},{"key":"ref31","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0022751"},{"key":"ref30","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.07464-11"},{"key":"ref37","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.00448-06"},{"key":"ref36","doi-asserted-by":"publisher","DOI":"10.2217\/fmb.12.37"},{"key":"ref35","doi-asserted-by":"publisher","DOI":"10.1080\/10408398.2011.578221"},{"key":"ref34","doi-asserted-by":"publisher","DOI":"10.1016\/j.appet.2008.05.060"},{"key":"ref28","article-title":"Large-scale release of Campylobacter draft genomes; resources for food safety and public health from the 100K Pathogen Genome Project","author":"storey","year":"2015","journal-title":"100K Project Bioproject"},{"key":"ref27","doi-asserted-by":"publisher","DOI":"10.1128\/genomeA.00216-15"},{"key":"ref29","author":"storey","year":"0","journal-title":"2015 Large-scale release of Salmonella draft genomes resources for food safety and public health from the 100K Pathogen Genome Project"},{"key":"ref2","article-title":"Can technology deliver on the yield challenge to 2050","author":"fischer","year":"2009","journal-title":"Expert Meeting on How to Feed the World in 2050"},{"key":"ref1","year":"0","journal-title":"2050 A third more mouths to feed"},{"key":"ref20","doi-asserted-by":"publisher","DOI":"10.1126\/science.1218198"},{"key":"ref22","doi-asserted-by":"publisher","DOI":"10.1016\/j.tim.2014.03.005"},{"key":"ref21","doi-asserted-by":"publisher","DOI":"10.1371\/journal.ppat.1002647"},{"key":"ref24","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.02621-13"},{"key":"ref23","doi-asserted-by":"publisher","DOI":"10.3201\/eid2009.131095"},{"key":"ref26","doi-asserted-by":"publisher","DOI":"10.1007\/s00248-011-9880-1"},{"key":"ref25","doi-asserted-by":"publisher","DOI":"10.1038\/nature08656"},{"key":"ref50","doi-asserted-by":"publisher","DOI":"10.1128\/JB.01289-12"},{"key":"ref51","doi-asserted-by":"publisher","DOI":"10.1186\/1944-3277-9-20"},{"key":"ref59","doi-asserted-by":"publisher","DOI":"10.1147\/JRD.2016.2584798"},{"key":"ref58","article-title":"A scalable platform for meta-genomic analysis","author":"edlund","year":"0","journal-title":"143rd American Public Health Association (APHA) Annual Meeting and Exposition"},{"key":"ref57","doi-asserted-by":"publisher","DOI":"10.1038\/srep03416"},{"key":"ref56","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.00256-13"},{"key":"ref55","doi-asserted-by":"publisher","DOI":"10.1016\/j.cels.2015.01.001"},{"key":"ref54","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btu153"},{"key":"ref53","doi-asserted-by":"publisher","DOI":"10.1101\/gr.089532.108"},{"key":"ref52","author":"macarthur","year":"1967","journal-title":"The theory of island biogeography"},{"key":"ref10","doi-asserted-by":"publisher","DOI":"10.1126\/science.333.6051.1818"},{"key":"ref11","article-title":"WGS will become sole method but current typing capacity should be available-ECDC","author":"whitworth","year":"2015","journal-title":"Food Quality News"},{"key":"ref40","doi-asserted-by":"publisher","DOI":"10.1016\/j.chom.2011.10.007"},{"key":"ref12","article-title":"Sequencing the Food Supply Chain: How a New Consortium Will Improve Food Safety","author":"welser","year":"2015","journal-title":"Forbes"},{"key":"ref13","year":"2015","journal-title":"Launch pioneering effort to drive advances in global food safety"},{"key":"ref14","year":"0","journal-title":"Consortium for Sequencing the Food Supply Chain IBM Research and Mars tackle global health with food safety partnership"},{"key":"ref15","year":"0","journal-title":"Enteric diseases epidemiology branch Surveillance reports"},{"key":"ref16","article-title":"Salmonella outbreak linked to raw tuna sushi spreads to nine states","author":"bever","year":"2015"},{"key":"ref17","doi-asserted-by":"publisher","DOI":"10.1086\/381576"},{"key":"ref18","doi-asserted-by":"publisher","DOI":"10.4315\/0362-028X.JFP-13-150"},{"key":"ref19","doi-asserted-by":"publisher","DOI":"10.1146\/annurev-food-030713-092350"},{"key":"ref4","doi-asserted-by":"publisher","DOI":"10.1080\/19440049.2012.743192"},{"key":"ref3","year":"2011","journal-title":"Food safety modernization act (FSMA)"},{"key":"ref6","doi-asserted-by":"publisher","DOI":"10.1016\/j.tim.2014.01.006"},{"key":"ref5","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.02601-15"},{"key":"ref8","doi-asserted-by":"publisher","DOI":"10.1111\/jam.12795"},{"key":"ref7","article-title":"New York attorney general targets supplements at major retailers","author":"o'connor","year":"2015"},{"key":"ref49","doi-asserted-by":"publisher","DOI":"10.1073\/pnas.0607117103"},{"key":"ref9","doi-asserted-by":"publisher","DOI":"10.1128\/mSphere.00057-16"},{"key":"ref46","doi-asserted-by":"publisher","DOI":"10.1016\/j.copbio.2012.08.004"},{"key":"ref45","doi-asserted-by":"publisher","DOI":"10.1016\/S0168-1605(03)00106-5"},{"key":"ref48","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2164-14-530"},{"key":"ref47","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.00570-10"},{"key":"ref42","doi-asserted-by":"publisher","DOI":"10.1128\/AEM.00956-12"},{"key":"ref41","doi-asserted-by":"publisher","DOI":"10.4161\/gmic.23188"},{"key":"ref44","doi-asserted-by":"publisher","DOI":"10.1016\/j.ijfoodmicro.2012.04.016"},{"key":"ref43","doi-asserted-by":"publisher","DOI":"10.1074\/mcp.M111.015248"}],"container-title":["IBM Journal of Research and Development"],"original-title":[],"link":[{"URL":"http:\/\/xplorestaging.ieee.org\/ielx7\/5288520\/7580579\/07580718.pdf?arnumber=7580718","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,10,27]],"date-time":"2025-10-27T18:03:22Z","timestamp":1761588202000},"score":1,"resource":{"primary":{"URL":"https:\/\/ieeexplore.ieee.org\/document\/7580718\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2016,9]]},"references-count":59,"journal-issue":{"issue":"5\/6"},"URL":"https:\/\/doi.org\/10.1147\/jrd.2016.2582598","relation":{},"ISSN":["0018-8646","0018-8646"],"issn-type":[{"value":"0018-8646","type":"print"},{"value":"0018-8646","type":"electronic"}],"subject":[],"published":{"date-parts":[[2016,9]]}}}