{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,2,21]],"date-time":"2025-02-21T14:25:49Z","timestamp":1740147949841,"version":"3.37.3"},"reference-count":43,"publisher":"Wiley","license":[{"start":{"date-parts":[[2020,6,18]],"date-time":"2020-06-18T00:00:00Z","timestamp":1592438400000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100004731","name":"Natural Science Foundation of Zhejiang Province","doi-asserted-by":"publisher","award":["LY20F020016","61772028"],"award-info":[{"award-number":["LY20F020016","61772028"]}],"id":[{"id":"10.13039\/501100004731","id-type":"DOI","asserted-by":"publisher"}]},{"DOI":"10.13039\/501100001809","name":"National Natural Science Foundation of China","doi-asserted-by":"publisher","award":["LY20F020016","61772028"],"award-info":[{"award-number":["LY20F020016","61772028"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Computational and Mathematical Methods in Medicine"],"published-print":{"date-parts":[[2020,6,18]]},"abstract":"<jats:p>A human papillomavirus type plays an important role in the early diagnosis of cervical cancer. Most of the prediction methods use protein sequence and structure information, but the reduced amino acid modes have not been used until now. In this paper, we introduced the modes of reduced amino acids to predict high-risk HPV. We first reduced 20 amino acids into several nonoverlapping groups and calculated their structure and physicochemical modes for high-risk HPV prediction, which was tested and compared with the existing methods on 68 samples of known HPV types. The experiment result indicates that the proposed method achieved better performance with an accuracy of 96.49%, indicating that the reduced amino acid modes might be used to improve the prediction of high-risk HPV types.<\/jats:p>","DOI":"10.1155\/2020\/5325304","type":"journal-article","created":{"date-parts":[[2020,6,18]],"date-time":"2020-06-18T23:32:31Z","timestamp":1592523151000},"page":"1-10","source":"Crossref","is-referenced-by-count":1,"title":["Prediction of High-Risk Types of Human Papillomaviruses Using Reduced Amino Acid Modes"],"prefix":"10.1155","volume":"2020","author":[{"given":"Xinnan","family":"Xu","sequence":"first","affiliation":[{"name":"College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Rui","family":"Kong","sequence":"additional","affiliation":[{"name":"College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Xiaoqing","family":"Liu","sequence":"additional","affiliation":[{"name":"College of Sciences, Hangzhou Dianzi University, Hangzhou 310018, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-3749-1483","authenticated-orcid":true,"given":"Pingan","family":"He","sequence":"additional","affiliation":[{"name":"College of Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, China"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-2675-6511","authenticated-orcid":true,"given":"Qi","family":"Dai","sequence":"additional","affiliation":[{"name":"College of Life Sciences, Zhejiang Sci-Tech University, Hangzhou 310018, China"}],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"311","reference":[{"key":"1","doi-asserted-by":"publisher","DOI":"10.1586\/14789450.3.1.21"},{"key":"2","doi-asserted-by":"publisher","DOI":"10.2147\/ott.s25123"},{"key":"3","doi-asserted-by":"publisher","DOI":"10.3322\/caac.20107"},{"key":"4","doi-asserted-by":"publisher","DOI":"10.1016\/j.vaccine.2012.07.055"},{"key":"5","doi-asserted-by":"publisher","DOI":"10.1093\/jnci\/87.11.796"},{"key":"6","doi-asserted-by":"publisher","DOI":"10.1093\/jnci\/85.12.958"},{"key":"7","doi-asserted-by":"publisher","DOI":"10.1007\/11760191_104"},{"key":"8","doi-asserted-by":"publisher","DOI":"10.1016\/j.micpath.2012.11.002"},{"key":"9","doi-asserted-by":"publisher","DOI":"10.1007\/11732242_6"},{"key":"10","doi-asserted-by":"publisher","DOI":"10.1016\/j.radonc.2013.06.004"},{"key":"11","doi-asserted-by":"publisher","DOI":"10.1128\/JCM.01170-12"},{"key":"12","doi-asserted-by":"publisher","DOI":"10.1128\/MMBR.68.2.362-372.2004"},{"key":"13","doi-asserted-by":"publisher","DOI":"10.1016\/j.compbiomed.2008.12.005"},{"key":"14","doi-asserted-by":"publisher","DOI":"10.1016\/j.virol.2004.03.033"},{"key":"15","doi-asserted-by":"publisher","DOI":"10.1128\/JVI.78.21.11451-11460.2004"},{"key":"16","doi-asserted-by":"publisher","DOI":"10.1016\/j.annpat.2012.09.231"},{"key":"17","doi-asserted-by":"publisher","DOI":"10.3322\/canjclin.51.2.92"},{"key":"18","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0018095"},{"key":"19","doi-asserted-by":"publisher","DOI":"10.1002\/ijc.27485"},{"issue":"3-4","key":"20","first-page":"124","volume":"49","year":"2002","journal-title":"Journal of Medical Investigation"},{"key":"21","doi-asserted-by":"publisher","DOI":"10.1093\/infdis\/174.4.679"},{"key":"22","doi-asserted-by":"publisher","DOI":"10.1056\/NEJMoa021641"},{"first-page":"1334","volume-title":"Genetic mining of DNA sequence structures for effective classification of the risk types of human papillomavirus(HPV)","year":"2004","key":"23"},{"first-page":"723","volume-title":"Prediction of the risk types of human papillomaviruses by support vector machines","year":"2004","key":"24"},{"key":"25","doi-asserted-by":"publisher","DOI":"10.1016\/j.compbiomed.2004.04.007"},{"first-page":"403","volume-title":"Mining the risk types of human papillomavirus (HPV) by AdaCost","year":"2003","key":"26"},{"key":"27","doi-asserted-by":"publisher","DOI":"10.1016\/j.jtbi.2009.11.016"},{"key":"28","doi-asserted-by":"publisher","DOI":"10.1007\/s12010-013-0479-5"},{"key":"29","doi-asserted-by":"publisher","DOI":"10.1093\/protein\/9.1.27"},{"key":"30","doi-asserted-by":"publisher","DOI":"10.1093\/protein\/gzg044"},{"key":"31","doi-asserted-by":"publisher","DOI":"10.1074\/jbc.M401932200"},{"key":"32","doi-asserted-by":"publisher","DOI":"10.1186\/1471-2105-14-152"},{"key":"33","doi-asserted-by":"publisher","DOI":"10.1002\/jcc.21918"},{"key":"34","doi-asserted-by":"publisher","DOI":"10.1016\/j.molimm.2006.04.001"},{"key":"35","doi-asserted-by":"publisher","DOI":"10.1016\/j.drudis.2007.02.015"},{"key":"36","doi-asserted-by":"publisher","DOI":"10.1016\/j.jtbi.2007.05.019"},{"key":"37","doi-asserted-by":"publisher","DOI":"10.1007\/s00726-006-0439-2"},{"key":"38","doi-asserted-by":"publisher","DOI":"10.1007\/s00726-011-0848-8"},{"key":"39","doi-asserted-by":"publisher","DOI":"10.1023\/A:1007091128394"},{"key":"40","doi-asserted-by":"publisher","DOI":"10.1002\/bip.360270308"},{"key":"41","doi-asserted-by":"publisher","DOI":"10.1002\/ajpa.20250"},{"key":"42","doi-asserted-by":"publisher","DOI":"10.1006\/bbrc.2000.3815"},{"key":"43","doi-asserted-by":"publisher","DOI":"10.1016\/j.jtbi.2013.10.002"}],"container-title":["Computational and Mathematical Methods in Medicine"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/downloads.hindawi.com\/journals\/cmmm\/2020\/5325304.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/downloads.hindawi.com\/journals\/cmmm\/2020\/5325304.xml","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/downloads.hindawi.com\/journals\/cmmm\/2020\/5325304.pdf","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,6,18]],"date-time":"2020-06-18T23:32:40Z","timestamp":1592523160000},"score":1,"resource":{"primary":{"URL":"https:\/\/www.hindawi.com\/journals\/cmmm\/2020\/5325304\/"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020,6,18]]},"references-count":43,"alternative-id":["5325304","5325304"],"URL":"https:\/\/doi.org\/10.1155\/2020\/5325304","relation":{},"ISSN":["1748-670X","1748-6718"],"issn-type":[{"type":"print","value":"1748-670X"},{"type":"electronic","value":"1748-6718"}],"subject":[],"published":{"date-parts":[[2020,6,18]]}}}