{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,19]],"date-time":"2026-02-19T13:04:23Z","timestamp":1771506263639,"version":"3.50.1"},"reference-count":29,"publisher":"Wiley","issue":"1","license":[{"start":{"date-parts":[[2023,10,10]],"date-time":"2023-10-10T00:00:00Z","timestamp":1696896000000},"content-version":"vor","delay-in-days":282,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100000780","name":"European Commission","doi-asserted-by":"publisher","award":["811034"],"award-info":[{"award-number":["811034"]}],"id":[{"id":"10.13039\/501100000780","id-type":"DOI","asserted-by":"publisher"}]}],"content-domain":{"domain":["onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["BioMed Research International"],"published-print":{"date-parts":[[2023,1]]},"abstract":"<jats:p>Hackathons are collaborative events that bring together diverse groups to solve predefined challenges. The COVID\u201019 pandemic caused by SARS\u2010CoV\u20102 has emphasized the need for portable and reproducible genomics analysis pipelines to study the genetic susceptibility of the human host and investigate human\u2010SARS\u2010CoV\u20102 protein interactions. To build and strengthen institutional capacities in OMICS data analysis applied to host\u2010pathogen interaction (HPI), the PHINDaccess project organized two hackathons in 2020 and 2021. These hackathons are aimed at developing bioinformatics pipelines related to the SARS\u2010CoV\u20102 viral genome, its phylodynamic transmission, and the identification of human genome host variants, with a focus on addressing global health challenges, particularly in low\u2010 and middle\u2010income countries (LMIC). This paper outlines the preparation, proceedings, and lessons learned from these hackathons, including the challenges faced by participants and our recommendations based on our experience for organizing hackathons in LMIC and beyond.<\/jats:p>","DOI":"10.1155\/2023\/6638714","type":"journal-article","created":{"date-parts":[[2023,10,10]],"date-time":"2023-10-10T16:50:28Z","timestamp":1696956628000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":2,"title":["PHINDaccess Hackathons for COVID\u201019 and Host\u2010Pathogen Interaction: Lessons Learned and Recommendations for Low\u2010 and Middle\u2010Income 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