{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,18]],"date-time":"2026-05-18T22:00:53Z","timestamp":1779141653169,"version":"3.51.4"},"reference-count":45,"publisher":"Wiley","issue":"1","license":[{"start":{"date-parts":[[2024,8,2]],"date-time":"2024-08-02T00:00:00Z","timestamp":1722556800000},"content-version":"vor","delay-in-days":214,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["onlinelibrary.wiley.com"],"crossmark-restriction":true},"short-container-title":["International Journal of Genomics"],"published-print":{"date-parts":[[2024,1]]},"abstract":"<jats:p>Bacterial strains coded 21LM367, 21LM07, and 21LM1136 were isolated from the urine of patients with urinary tract infections (UTIs) at the Centre Hospitalier R\u00e9gional de Daloa in C\u00f4te d\u2019Ivoire. Based on average nucleotide identity (ANI) analysis, DNA\u2010DNA digital hybridisation (dDDH), and other comparative genomic methods, strains 21LM07, 21LM367, and 21LM1136 were determined to be <jats:italic>Priestia flexa<\/jats:italic>. The size of the assembled complete genomes ranged from 8,624,538 to 4,007,501\u2009bp. The average GC content was 37.76%, 46.33%, and 43.03% for strains 21LM07, 21LM367, and 21LM1136, respectively. The total number of coding regions (CDS) in each genome was 4172, 8497, and 6795, respectively, for strains 21LM07, 21LM367, and 21LM1136. Genomic prediction analysis revealed that a total of 4241, 8583, and 6881 genes were annotated in the 21LM07, 21LM367, and 21LM1136 genomes, respectively. No virulence or resistance genes were predicted in the genomes of strains 21LM07 and 21LM1136. On the other hand, two genes conferring resistance to beta\u2010lactam and tetracyclines as well as nine virulence genes were predicted in the genome of 21LM367. In addition, 438, 350, and 153 mobile genetic elements (MGEs) were predicted in the genomes of strains 21LM367, 21LM1136, and 21LM07, respectively. Strain 21LM07 was characterised by the absence of plasmids in its genome. Two plasmids were predicted in the genomes of isolates 21LM367 and 21LM1136; however, rep7a and IncI2 were predicted to contain the tet(K) resistance gene. No typical multilocus sequences could be characterised in the genomes of the different strains.<\/jats:p>","DOI":"10.1155\/2024\/6239250","type":"journal-article","created":{"date-parts":[[2024,8,3]],"date-time":"2024-08-03T04:33:57Z","timestamp":1722659637000},"update-policy":"https:\/\/doi.org\/10.1002\/crossmark_policy","source":"Crossref","is-referenced-by-count":3,"title":["<i>Priestia flexa<\/i> as a Novel Urinary Tract Pathogen in Daloa, C\u00f4te d\u2019Ivoire: Insights From Genomic Sequencing"],"prefix":"10.1155","volume":"2024","author":[{"ORCID":"https:\/\/orcid.org\/0009-0009-3362-7217","authenticated-orcid":false,"given":"D\u00e9ho Aristide","family":"Gb\u00e9gb\u00e9","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0009-0002-5684-2744","authenticated-orcid":false,"given":"Okran Beyosse Christophe","family":"Kacou","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0009-0002-3339-7975","authenticated-orcid":false,"given":"N\u2019goran Parfait","family":"N\u2019zi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0002-3435-614X","authenticated-orcid":false,"given":"Dj\u00e9doux Maxime","family":"Angaman","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"311","published-online":{"date-parts":[[2024,8,2]]},"reference":[{"key":"e_1_2_11_1_2","doi-asserted-by":"publisher","DOI":"10.1080\/01443615.2017.1370579"},{"key":"e_1_2_11_2_2","doi-asserted-by":"publisher","DOI":"10.21276\/apalm.2659"},{"key":"e_1_2_11_3_2","doi-asserted-by":"publisher","DOI":"10.1016\/S0002-9343(02)01054-9"},{"key":"e_1_2_11_4_2","doi-asserted-by":"publisher","DOI":"10.3390\/pathogens5010010"},{"key":"e_1_2_11_5_2","doi-asserted-by":"publisher","DOI":"10.2147\/IDR.S250654"},{"key":"e_1_2_11_6_2","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0274423"},{"key":"e_1_2_11_7_2","doi-asserted-by":"publisher","DOI":"10.11604\/pamj.2015.20.100.4356"},{"key":"e_1_2_11_8_2","doi-asserted-by":"publisher","DOI":"10.5173\/ceju.2015.01.474"},{"key":"e_1_2_11_9_2","doi-asserted-by":"publisher","DOI":"10.1038\/nrmicro3432"},{"key":"e_1_2_11_10_2","doi-asserted-by":"publisher","DOI":"10.1136\/pgmj.2004.023036"},{"key":"e_1_2_11_11_2","doi-asserted-by":"publisher","DOI":"10.1111\/j.1365-2362.2008.01986.x"},{"key":"e_1_2_11_12_2","doi-asserted-by":"publisher","DOI":"10.1038\/nrurol.2010.190"},{"key":"e_1_2_11_13_2","first-page":"173","article-title":"Epidemiology and diagnosis of urinary tract infections","volume":"7","author":"Leroy V.","year":"2004","journal-title":"M\u00e9decine Th\u00e9rapeutique P\u00e9diatrie"},{"key":"e_1_2_11_14_2","doi-asserted-by":"publisher","DOI":"10.1067\/mem.2001.119427"},{"key":"e_1_2_11_15_2","first-page":"635","article-title":"Management of urinary tract infection in general practice: a cost-effectiveness analysis","volume":"50","author":"Fenwick E. 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