{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,27]],"date-time":"2026-02-27T04:01:16Z","timestamp":1772164876832,"version":"3.50.1"},"reference-count":137,"publisher":"MIT Press","license":[{"start":{"date-parts":[[2024,10,22]],"date-time":"2024-10-22T00:00:00Z","timestamp":1729555200000},"content-version":"vor","delay-in-days":295,"URL":"https:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["direct.mit.edu"],"crossmark-restriction":true},"short-container-title":[],"published-print":{"date-parts":[[2024,11,12]]},"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:p>Functional magnetic resonance imaging (fMRI) of the auditory and visual sensory systems of the human brain is an active area of investigation in the study of human health and disease. The medial geniculate nucleus (MGN) and lateral geniculate nucleus (LGN) are key thalamic nuclei involved in the processing and relay of auditory and visual information, respectively, and are the subject of blood-oxygen-level-dependent (BOLD) fMRI studies of neural activation and functional connectivity in human participants. However, localization of BOLD fMRI signal originating from neural activity in MGN and LGN remains a technical challenge, due, in part, to the poor definition of boundaries of these thalamic nuclei in standard T1-weighted and T2-weighted magnetic resonance imaging sequences. Here, we report the development and evaluation of an auditory and visual sensory thalamic localizer (TL) fMRI task that produces participant-specific functionally-defined regions of interest (fROIs) of both MGN and LGN, using 3 Tesla multiband fMRI and a clustered-sparse temporal acquisition sequence, in less than 16 minutes of scan time. We demonstrate the use of MGN and LGN fROIs obtained from the TL fMRI task in standard resting-state functional connectivity (RSFC) fMRI analyses in the same participants. In RSFC analyses, we validated the specificity of MGN and LGN fROIs for signals obtained from primary auditory and visual cortex, respectively, and benchmarked their performance against alternative atlas- and segmentation-based localization methods. The TL fMRI task and analysis code (written in Presentation and MATLAB, respectively) have been made freely available to the wider research community.<\/jats:p>","DOI":"10.1162\/imag_a_00360","type":"journal-article","created":{"date-parts":[[2024,10,22]],"date-time":"2024-10-22T16:01:16Z","timestamp":1729612876000},"update-policy":"https:\/\/doi.org\/10.1162\/mitpressjournals.corrections.policy","source":"Crossref","is-referenced-by-count":2,"title":["Functional localization of the human auditory and visual thalamus using a thalamic localizer functional magnetic resonance imaging task"],"prefix":"10.1162","volume":"2","author":[{"given":"John C.","family":"Williams","sequence":"first","affiliation":[{"name":"Department of Psychiatry and Behavioral Health, Renaissance School of Medicine at Stony Brook University, Stony Brook, NY, United States"},{"name":"Department of Biomedical Engineering, Stony Brook University, Stony Brook, NY, United States"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Philip N.","family":"Tubiolo","sequence":"additional","affiliation":[{"name":"Department of Psychiatry and Behavioral Health, Renaissance School of Medicine at Stony Brook University, Stony Brook, NY, United States"},{"name":"Department of Biomedical Engineering, Stony Brook University, Stony Brook, NY, United States"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Zu Jie","family":"Zheng","sequence":"additional","affiliation":[{"name":"Department of Psychiatry and Behavioral Health, Renaissance School of Medicine at Stony Brook University, Stony Brook, NY, United States"},{"name":"State University of New York Downstate Health Sciences University College of Medicine, Brooklyn, NY, United States"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Eilon B.","family":"Silver-Frankel","sequence":"additional","affiliation":[{"name":"Department of Psychiatry and Behavioral Health, Renaissance School of Medicine at Stony Brook University, Stony Brook, NY, United States"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Dathy T.","family":"Pham","sequence":"additional","affiliation":[{"name":"Department of Psychiatry and Behavioral Health, Renaissance School of Medicine at Stony Brook University, Stony Brook, NY, United States"},{"name":"Department of Neurobiology and Behavior, Cornell University, Ithaca, NY, United States"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Natalka K.","family":"Haubold","sequence":"additional","affiliation":[{"name":"Department of Psychiatry and Behavioral Health, Renaissance School of Medicine at Stony Brook University, Stony Brook, NY, United States"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sameera K.","family":"Abeykoon","sequence":"additional","affiliation":[{"name":"Department of Psychiatry and Behavioral Health, Renaissance School of Medicine at Stony Brook University, Stony Brook, NY, United States"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Anissa","family":"Abi-Dargham","sequence":"additional","affiliation":[{"name":"Department of Psychiatry and Behavioral Health, Renaissance School of Medicine at Stony Brook University, Stony Brook, NY, United States"},{"name":"Department of Biomedical Engineering, Stony Brook University, Stony Brook, NY, United States"},{"name":"Department of Psychiatry, Columbia University Vagelos College of Physicians and Surgeons, New York-Presbyterian \/ Columbia University Irving Medical Center, New York, NY, United States"},{"name":"New York State Psychiatric Institute, New York, NY, United States"},{"name":"Department of Radiology, Renaissance School of Medicine at Stony Brook University, Stony Brook, NY, United States"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Guillermo","family":"Horga","sequence":"additional","affiliation":[{"name":"Department of Psychiatry, Columbia University Vagelos College of Physicians and Surgeons, New York-Presbyterian \/ Columbia University Irving Medical Center, New York, NY, United States"},{"name":"New York State Psychiatric Institute, New York, NY, United States"}],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jared X.","family":"Van Snellenberg","sequence":"additional","affiliation":[{"name":"Department of Psychiatry and Behavioral Health, Renaissance School of Medicine at Stony Brook University, Stony Brook, NY, United States"},{"name":"Department of Biomedical Engineering, Stony Brook University, Stony Brook, NY, United States"},{"name":"Department of Psychiatry, Columbia University Vagelos College of Physicians and Surgeons, New York-Presbyterian \/ Columbia University Irving Medical Center, New York, NY, United States"},{"name":"New York State Psychiatric Institute, New York, NY, United States"},{"name":"Department of Psychology, Stony Brook University, Stony Brook, NY, United 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