{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,3,27]],"date-time":"2025-03-27T19:59:13Z","timestamp":1743105553012,"version":"3.38.0"},"reference-count":25,"publisher":"SAGE Publications","issue":"12","license":[{"start":{"date-parts":[[2017,7,24]],"date-time":"2017-07-24T00:00:00Z","timestamp":1500854400000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/journals.sagepub.com\/page\/policies\/text-and-data-mining-license"}],"content-domain":{"domain":["journals.sagepub.com"],"crossmark-restriction":true},"short-container-title":["SIMULATION"],"published-print":{"date-parts":[[2017,12]]},"abstract":"<jats:p> In single-file dynamics, Brownian particles (referred to as tracer or tagged particles) diffuse and collide with each other in one-dimensional domains. If the average particle density is kept fixed during the diffusion, the collisions between the tracer particles result in their famous anomalous sub-diffusion behavior with time to the one half dependence. Many systems in nature are found to obey single-file dynamics, such as ion transport processes, and inter-particle adhesion plays a crucial role, either structurally or functionally, in the diffusion of such systems; however, the exact effect of adhesion on the diffusion has not been studied so far. We have examined the effect of adhesion on the collective diffusion of single-file systems. Here, we extend previous work where we perform large-scale numerical simulations that utilize Monte Carlo techniques and high-performance computing resources to examine the effect of adhesion on the diffusion of the tracer particles in systems that obey single-file dynamics. We show that if all the tracer particles experience the same adhesion coefficient, adhesion only slows down the diffusion by reducing the magnitude of the tracer diffusion coefficient; however, both the anomalous sub-diffusion behavior and time to the one half dependence of the tracer particles remain almost intact, independent of the adhesion. <\/jats:p>","DOI":"10.1177\/0037549717720024","type":"journal-article","created":{"date-parts":[[2017,7,24]],"date-time":"2017-07-24T09:18:29Z","timestamp":1500887909000},"page":"1037-1044","update-policy":"https:\/\/doi.org\/10.1177\/sage-journals-update-policy","source":"Crossref","is-referenced-by-count":1,"title":["Toward a more biologically accurate model of diffusion: adhesion and collisions"],"prefix":"10.1177","volume":"93","author":[{"given":"Ahmed M","family":"Fouad","sequence":"first","affiliation":[{"name":"Department of Physics, Temple University, USA"}]},{"given":"John A","family":"Noel","sequence":"additional","affiliation":[{"name":"Department of Physics, Temple University, USA"}]}],"member":"179","published-online":{"date-parts":[[2017,7,24]]},"reference":[{"key":"bibr1-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1016\/S0955-0674(02)00351-4"},{"key":"bibr2-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1007\/0-387-68919-2"},{"key":"bibr3-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1115\/1.1451234"},{"key":"bibr4-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevLett.93.026001"},{"key":"bibr5-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1126\/science.287.5453.625"},{"key":"bibr6-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1063\/1.1675789"},{"key":"bibr7-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevB.16.1393"},{"key":"bibr8-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1007\/BF01125822"},{"key":"bibr9-0037549717720024","unstructured":"K\u00e4rger J, Ruthven DM. Diffusion in zeolites. Handbook of zeolite science and technology. 1992, p.341. Boca Raton, FL: CRC Press."},{"key":"bibr10-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1126\/science.272.5262.702"},{"key":"bibr11-0037549717720024","doi-asserted-by":"publisher","DOI":"10.2307\/3212197"},{"key":"bibr12-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevB.28.5711"},{"key":"bibr13-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1007\/BF01011556"},{"key":"bibr14-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRev.155.122"},{"key":"bibr15-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1209\/epl\/i1998-00471-9"},{"key":"bibr16-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1002\/app.25086"},{"key":"bibr17-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1143\/JJAP.49.076501"},{"key":"bibr18-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1016\/j.physa.2017.03.030"},{"key":"bibr19-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1134\/S1063784212070249"},{"key":"bibr20-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1016\/S0955-0674(02)00304-6"},{"key":"bibr21-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1209\/0295-5075\/83\/20004"},{"volume-title":"Density-dependent diffusion models with biological applications: numerical modeling and analytic analysis","author":"Fouad A","key":"bibr22-0037549717720024"},{"key":"bibr23-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1103\/PhysRevLett.113.078101"},{"key":"bibr24-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1016\/j.spa.2007.10.015"},{"key":"bibr25-0037549717720024","doi-asserted-by":"publisher","DOI":"10.1007\/PL00008719"}],"container-title":["SIMULATION"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/journals.sagepub.com\/doi\/pdf\/10.1177\/0037549717720024","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.sagepub.com\/doi\/full-xml\/10.1177\/0037549717720024","content-type":"application\/xml","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/journals.sagepub.com\/doi\/pdf\/10.1177\/0037549717720024","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2025,3,2]],"date-time":"2025-03-02T02:51:58Z","timestamp":1740883918000},"score":1,"resource":{"primary":{"URL":"https:\/\/journals.sagepub.com\/doi\/10.1177\/0037549717720024"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,7,24]]},"references-count":25,"journal-issue":{"issue":"12","published-print":{"date-parts":[[2017,12]]}},"alternative-id":["10.1177\/0037549717720024"],"URL":"https:\/\/doi.org\/10.1177\/0037549717720024","relation":{},"ISSN":["0037-5497","1741-3133"],"issn-type":[{"type":"print","value":"0037-5497"},{"type":"electronic","value":"1741-3133"}],"subject":[],"published":{"date-parts":[[2017,7,24]]}}}