{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,3,17]],"date-time":"2026-03-17T07:05:46Z","timestamp":1773731146994,"version":"3.50.1"},"reference-count":44,"publisher":"Springer Science and Business Media LLC","issue":"1","content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["BMC Bioinformatics"],"published-print":{"date-parts":[[2010,12]]},"abstract":"<jats:title>Abstract<\/jats:title>\n          <jats:sec>\n            <jats:title>Background<\/jats:title>\n            <jats:p>MicroRNAs have been discovered as important regulators of gene expression. To identify the target genes of microRNAs, several databases and prediction algorithms have been developed. Only few experimentally confirmed microRNA targets are available in databases. Many of the microRNA targets stored in databases were derived from large-scale experiments that are considered not very reliable. We propose to use text mining of publication abstracts for extracting microRNA-gene associations including microRNA-target relations to complement current repositories.<\/jats:p>\n          <\/jats:sec>\n          <jats:sec>\n            <jats:title>Results<\/jats:title>\n            <jats:p>The microRNA-gene association database miRSel combines text-mining results with existing databases and computational predictions. Text mining enables the reliable extraction of microRNA, gene and protein occurrences as well as their relationships from texts. Thereby, we increased the number of human, mouse and rat miRNA-gene associations by at least three-fold as compared to e.g. TarBase, a resource for miRNA-gene associations.<\/jats:p>\n          <\/jats:sec>\n          <jats:sec>\n            <jats:title>Conclusions<\/jats:title>\n            <jats:p>Our database miRSel offers the currently largest collection of literature derived miRNA-gene associations. Comprehensive collections of miRNA-gene associations are important for the development of miRNA target prediction tools and the analysis of regulatory networks. miRSel is updated daily and can be queried using a web-based interface via microRNA identifiers, gene and protein names, PubMed queries as well as gene ontology (GO) terms. miRSel is freely available online at <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"http:\/\/services.bio.ifi.lmu.de\/mirsel\" ext-link-type=\"uri\">http:\/\/services.bio.ifi.lmu.de\/mirsel<\/jats:ext-link>.<\/jats:p>\n          <\/jats:sec>","DOI":"10.1186\/1471-2105-11-135","type":"journal-article","created":{"date-parts":[[2010,3,16]],"date-time":"2010-03-16T19:15:41Z","timestamp":1268766941000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":67,"title":["miRSel: Automated extraction of associations between microRNAs and genes from the biomedical literature"],"prefix":"10.1186","volume":"11","author":[{"given":"Haroon","family":"Naeem","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Robert","family":"K\u00fcffner","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Gergely","family":"Csaba","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ralf","family":"Zimmer","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2010,3,16]]},"reference":[{"issue":"2","key":"3592_CR1","doi-asserted-by":"publisher","first-page":"141","DOI":"10.1038\/nrm2619","volume":"10","author":"P Brodersen","year":"2009","unstructured":"Brodersen P, Voinnet O: Revisiting the principles of microRNA target recognition and mode of action. Nat Rev Mol Cell Biol 2009, 10(2):141\u2013148. 10.1038\/nrm2619","journal-title":"Nat Rev Mol Cell Biol"},{"issue":"7209","key":"3592_CR2","doi-asserted-by":"publisher","first-page":"64","DOI":"10.1038\/nature07242","volume":"455","author":"D Baek","year":"2008","unstructured":"Baek D, Vill\u00e9n J, Shin C, Camargo FD, Gygi SP, Bartel DP: The impact of microRNAs on protein output. Nature 2008, 455(7209):64\u201371. 10.1038\/nature07242","journal-title":"Nature"},{"issue":"2","key":"3592_CR3","doi-asserted-by":"publisher","first-page":"215","DOI":"10.1016\/j.cell.2009.01.002","volume":"136","author":"DP Bartel","year":"2009","unstructured":"Bartel DP: MicroRNAs: target recognition and regulatory functions. Cell 2009, 136(2):215\u2013233. 10.1016\/j.cell.2009.01.002","journal-title":"Cell"},{"key":"3592_CR4","first-page":"1","volume-title":"Gene","author":"UA Orom","year":"2009","unstructured":"Orom UA, Lund AH: Experimental identification of microRNA targets. Gene 2009, 1\u20135."},{"issue":"4","key":"3592_CR5","doi-asserted-by":"publisher","first-page":"667","DOI":"10.1007\/s00268-008-9836-x","volume":"33","author":"M Li","year":"2009","unstructured":"Li M, Marin-Muller C, Bharadwaj U, Chow KH, Yao Q, Chen C: MicroRNAs: control and loss of control in human physiology and disease. World J Surg 2009, 33(4):667\u2013684. 10.1007\/s00268-008-9836-x","journal-title":"World J Surg"},{"key":"3592_CR6","doi-asserted-by":"publisher","first-page":"D98","DOI":"10.1093\/nar\/gkn714","volume":"37","author":"Q Jiang","year":"2009","unstructured":"Jiang Q, Wang Y, Hao Y, Juan L, Teng M, Zhang X, Li M, Wang G, Liu Y: miR2Disease: a manually curated database for microRNA deregulation in human disease. Nucleic Acids Res 2009, 37: D98\u2013104. 10.1093\/nar\/gkn714","journal-title":"Nucleic Acids Res"},{"issue":"5","key":"3592_CR7","doi-asserted-by":"publisher","first-page":"843","DOI":"10.1016\/0092-8674(93)90529-Y","volume":"75","author":"RC Lee","year":"1993","unstructured":"Lee RC, Feinbaum RL, Ambros V: The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14. Cell 1993, 75(5):843\u2013854. 10.1016\/0092-8674(93)90529-Y","journal-title":"Cell"},{"key":"3592_CR8","doi-asserted-by":"publisher","first-page":"D154","DOI":"10.1093\/nar\/gkm952","volume":"36","author":"S Griffiths-Jones","year":"2008","unstructured":"Griffiths-Jones S, Saini HK, van Dongen S, Enright AJ: miRBase: tools for microRNA genomics. Nucleic Acids Res 2008, 36: D154\u20138. 10.1093\/nar\/gkm952","journal-title":"Nucleic Acids Res"},{"issue":"10","key":"3592_CR9","doi-asserted-by":"publisher","first-page":"1278","DOI":"10.1038\/ng2135","volume":"39","author":"M Kertesz","year":"2007","unstructured":"Kertesz M, Iovino N, Unnerstall U, Gaul U, Segal E: The role of site accessibility in microRNA target recognition. Nat Genet 2007, 39(10):1278\u201384. 10.1038\/ng2135","journal-title":"Nat Genet"},{"key":"3592_CR10","doi-asserted-by":"publisher","first-page":"1012","DOI":"10.1261\/rna.965408","volume":"14","author":"X Wang","year":"2008","unstructured":"Wang X: miRDB: a microRNA target prediction and functional annotation database with a wiki interface. RNA 2008, 14: 1012\u20131017. 10.1261\/rna.965408","journal-title":"RNA"},{"key":"3592_CR11","volume-title":"The microRNA.org resource","author":"D Betel","year":"2008","unstructured":"Betel D, Wilson M, Gabow A, Marks DS, Sander C: The microRNA.org resource: targets and expression. Nucleic Acids Res 2008, (36 Database):D149\u201353."},{"key":"3592_CR12","doi-asserted-by":"publisher","first-page":"495","DOI":"10.1038\/ng1536","volume":"37","author":"A Krek","year":"2005","unstructured":"Krek A, Gr\u00fcn D, Poy MN, Wolf R, Rosenberg L, Epstein EJ, MacMenamin P, da Piedade I, Gunsalus KC, Stoffel M, Rajewsky N: Combinatorial microRNA target predictions. Nat Genet 2005, 37: 495\u2013500. 10.1038\/ng1536","journal-title":"Nat Genet"},{"key":"3592_CR13","doi-asserted-by":"publisher","first-page":"787","DOI":"10.1016\/S0092-8674(03)01018-3","volume":"115","author":"BP Lewis","year":"2003","unstructured":"Lewis BP, Shih IH, Jones-Rhoades MW, Bartel DP, Burge CB: Prediction of mammalian microRNA targets. Cell 2003, 115: 787\u2013798. 10.1016\/S0092-8674(03)01018-3","journal-title":"Cell"},{"issue":"5","key":"3592_CR14","doi-asserted-by":"publisher","first-page":"e5745","DOI":"10.1371\/journal.pone.0005745","volume":"4","author":"C Ragan","year":"2009","unstructured":"Ragan C, Cloonan N, Grimmond SM, Zuker M, Ragan MA: Transcriptome-wide prediction of miRNA targets in human and mouse using FASTH. PLoS One 2009, 4(5):e5745. 10.1371\/journal.pone.0005745","journal-title":"PLoS One"},{"key":"3592_CR15","doi-asserted-by":"publisher","first-page":"1165","DOI":"10.1101\/gad.1184704","volume":"18","author":"M Kiriakidou","year":"2004","unstructured":"Kiriakidou M, Nelson PT, Kouranov A, Fitziev P, Bouyioukos C, Mourelatos Z, Hatzigeorgiou A: A combined computational-experimental approach predicts human microRNA targets. Genes Dev 2004, 18: 1165\u201378. 10.1101\/gad.1184704","journal-title":"Genes Dev"},{"key":"3592_CR16","doi-asserted-by":"publisher","first-page":"D105","DOI":"10.1093\/nar\/gkn851","volume":"37","author":"F Xiao","year":"2009","unstructured":"Xiao F, Zuo Z, Cai G, Kang S, Gao X, Li T: miRecords: an integrated resource for microRNA-target interactions. Nucleic Acids Res 2009, 37: D105\u201310. 10.1093\/nar\/gkn851","journal-title":"Nucleic Acids Res"},{"key":"3592_CR17","doi-asserted-by":"publisher","first-page":"192","DOI":"10.1261\/rna.2239606","volume":"12","author":"P Sethupathy","year":"2006","unstructured":"Sethupathy P, Corda B, Hatzigeorgiou AG: TarBase: A comprehensive database of experimentally supported animal microRNA targets. RNA 2006, 12: 192\u2013197. 10.1261\/rna.2239606","journal-title":"RNA"},{"key":"3592_CR18","doi-asserted-by":"publisher","first-page":"D155","DOI":"10.1093\/nar\/gkn809","volume":"37","author":"GL Papadopoulos","year":"2009","unstructured":"Papadopoulos GL, Reczko M, Simossis VA, Sethupathy P, Hatzigeorgiou AG: The database of experimentally supported targets: a functional update of TarBase. Nucleic Acids Res 2009, 37: D155\u20138. 10.1093\/nar\/gkn809","journal-title":"Nucleic Acids Res"},{"key":"3592_CR19","doi-asserted-by":"publisher","first-page":"159","DOI":"10.1093\/nar\/gkm829","volume":"36","author":"S Nam","year":"2008","unstructured":"Nam S, Kim B, Shin S, Lee S: miRGator: an integrated system for functional annotation of microRNAs. Nucleic Acids Res 2008, 36: 159\u2013164. 10.1093\/nar\/gkm829","journal-title":"Nucleic Acids Res"},{"key":"3592_CR20","first-page":"1","volume-title":"Nucleic Acids Res","author":"P Alexiou","year":"2009","unstructured":"Alexiou P, Vergoulis T, Gleditzsch M, Prekas G, Dalamagas T, Megraw M, Grosse I, Sellis T, Hatzigeorgiou AG: miRGen 2.0: a database of microRNA genomic information and regulation. Nucleic Acids Res 2009, 1\u20135."},{"key":"3592_CR21","doi-asserted-by":"publisher","first-page":"D445","DOI":"10.1093\/nar\/gkm881","volume":"36","author":"EA Bruford","year":"2008","unstructured":"Bruford EA, Lush MJ, Wright MW, Sneddon TP, Povey S, Birney E: The HGNC Database in 2008: a resource for the human genome. Nucleic Acids Res 2008, 36: D445\u2013448. 10.1093\/nar\/gkm881","journal-title":"Nucleic Acids Res"},{"key":"3592_CR22","doi-asserted-by":"publisher","first-page":"724","DOI":"10.1093\/nar\/gkm961","volume":"36","author":"CJ Bult","year":"2008","unstructured":"Bult CJ, Eppig JT, Kadin JA, Richardson JE, Blake JA, Mouse Genome Database Group: The Mouse Genome Database (MGD): mouse biology and model systems. Nucleic Acids Res 2008, 36: 724\u2013728. 10.1093\/nar\/gkm961","journal-title":"Nucleic Acids Res"},{"key":"3592_CR23","doi-asserted-by":"publisher","first-page":"D26","DOI":"10.1093\/nar\/gkl993","volume":"35","author":"D Maglott","year":"2007","unstructured":"Maglott D, Ostell J, Pruitt KD, Tatusova T: Entrez Gene: gene-centered information at NCBI. Nucleic Acids Res 2007, 35: D26-D31. 10.1093\/nar\/gkl993","journal-title":"Nucleic Acids Res"},{"key":"3592_CR24","doi-asserted-by":"publisher","first-page":"365","DOI":"10.1093\/nar\/gkg095","volume":"31","author":"B Boeckmann","year":"2003","unstructured":"Boeckmann B, Bairoch A, Apweiler R, Blatter MC, Estreicher A, Gasteiger E, Martin MJ, Michoud K, O'Donovan C, Phan I, Pilbout S, Schneider M: The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003. Nucleic Acids Res 2003, 31: 365\u201370. 10.1093\/nar\/gkg095","journal-title":"Nucleic Acids Res"},{"key":"3592_CR25","doi-asserted-by":"publisher","first-page":"165","DOI":"10.1093\/nar\/gkm1012","volume":"36","author":"SD Hsu","year":"2008","unstructured":"Hsu SD, Chu CH, Tsou AP, Chen SJ, Chen HC, Hsu PW, Wong YH, Chen YH, Chen GH, Huang HD: miRNAMap 2.0: genomic maps of microRNAs in metazoan genomes. Nucleic Acids Res 2008, 36: 165\u2013169. 10.1093\/nar\/gkm1012","journal-title":"Nucleic Acids Res"},{"issue":"7209","key":"3592_CR26","doi-asserted-by":"publisher","first-page":"58","DOI":"10.1038\/nature07228","volume":"455","author":"M Selbach","year":"2008","unstructured":"Selbach M, Schwanh\u00e4usser B, Thierfelder N, Fang Z, Khanin R, Rajewsky N: Widespread changes in protein synthesis induced by microRNAs. Nature 2008, 455(7209):58\u201363. 10.1038\/nature07228","journal-title":"Nature"},{"issue":"7027","key":"3592_CR27","doi-asserted-by":"publisher","first-page":"769","DOI":"10.1038\/nature03315","volume":"433","author":"LP Lim","year":"2005","unstructured":"Lim LP, Lau NC, Garrett-Engele P, Grimson A, Schelter JM, Castle J, Bartel DP, Linsley PS, Johnson JM: Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs. Nature 2005, 433(7027):769\u201373. 10.1038\/nature03315","journal-title":"Nature"},{"issue":"13","key":"3592_CR28","doi-asserted-by":"publisher","first-page":"5166","DOI":"10.1073\/pnas.0800121105","volume":"105","author":"GA Calin","year":"2008","unstructured":"Calin GA, Cimmino A, Fabbri M, Ferracin M, Wojcik SE, Shimizu M, Taccioli C, Zanesi N, Garzon R, Aqeilan RI, Alder H, Volinia S, Rassenti L, Liu X, Liu CG, Kipps TJ, Negrini M, Croce CM: MiR-15a and miR-16\u20131 cluster functions in human leukemia. Proceedings of the National Academy of Sciences of the USA 2008, 105(13):5166\u201371. 10.1073\/pnas.0800121105","journal-title":"Proceedings of the National Academy of Sciences of the USA"},{"issue":"3","key":"3592_CR29","doi-asserted-by":"publisher","first-page":"959","DOI":"10.1161\/STROKEAHA.107.500736","volume":"39","author":"K Jeyaseelan","year":"2008","unstructured":"Jeyaseelan K, Lim KY, Armugam A: MicroRNA expression in the blood and brain of rats subjected to transient focal ischemia by middle cerebral artery occlusion. Stroke 2008, 39(3):959\u201366. 10.1161\/STROKEAHA.107.500736","journal-title":"Stroke"},{"issue":"6","key":"3592_CR30","first-page":"397","volume":"6","author":"W Ritchie","year":"2009","unstructured":"Ritchie W, Flamant S, Rasko JE: Predicting microRNA targets and functions: traps for the unwary. Nat 2009, 6(6):397\u20138.","journal-title":"Nat"},{"issue":"Suppl 1","key":"3592_CR31","doi-asserted-by":"publisher","first-page":"S14","DOI":"10.1186\/1471-2105-6-S1-S14","volume":"6","author":"D Hanisch","year":"2005","unstructured":"Hanisch D, Fundel K, Mevissen HT, Zimmer R, Fluck J: ProMiner: rule-based protein and gene entity recognition. BMC Bioinformatics 2005, 6(Suppl 1):S14. 10.1186\/1471-2105-6-S1-S14","journal-title":"BMC Bioinformatics"},{"key":"3592_CR32","doi-asserted-by":"publisher","first-page":"372","DOI":"10.1186\/1471-2105-7-372","volume":"7","author":"K Fundel","year":"2006","unstructured":"Fundel K, Zimmer R: Gene and protein nomenclature in public databases. BMC Bioinformatics 2006, 7: 372. 10.1186\/1471-2105-7-372","journal-title":"BMC Bioinformatics"},{"issue":"Suppl 1","key":"3592_CR33","doi-asserted-by":"publisher","first-page":"S15","DOI":"10.1186\/1471-2105-6-S1-S15","volume":"6","author":"K Fundel","year":"2005","unstructured":"Fundel K, G\u00fcttler D, Zimmer R, Apostolakis J: A simple approach for protein name identification: prospects and limits. BMC Bioinformatics 2005, 6(Suppl 1):S15. 10.1186\/1471-2105-6-S1-S15","journal-title":"BMC Bioinformatics"},{"key":"3592_CR34","doi-asserted-by":"publisher","first-page":"119","DOI":"10.1038\/nrg1768","volume":"7","author":"LJ Jensen","year":"2006","unstructured":"Jensen LJ, Saric J, Bork P: Literature mining for the biologist: from information retrieval to biological discovery. Nat Rev Genet 2006, 7: 119\u2013129. 10.1038\/nrg1768","journal-title":"Nat Rev Genet"},{"key":"3592_CR35","doi-asserted-by":"publisher","first-page":"315","DOI":"10.1016\/j.drudis.2006.02.011","volume":"11","author":"RA Erhardt","year":"2006","unstructured":"Erhardt RA, Schneider R, Blaschke C: Status of text-mining techniques applied to biomedical text. Drug Discovery Today 2006, 11: 315\u2013325. 10.1016\/j.drudis.2006.02.011","journal-title":"Drug Discovery Today"},{"key":"3592_CR36","doi-asserted-by":"publisher","first-page":"571","DOI":"10.1016\/j.tibtech.2006.10.002","volume":"24","author":"S Ananiadou","year":"2006","unstructured":"Ananiadou S, Kell DB, Tsujii J: Text mining and its potential applications in systems biology. Trends Biotechnol 2006, 24: 571\u2013579. 10.1016\/j.tibtech.2006.10.002","journal-title":"Trends Biotechnol"},{"issue":"3","key":"3592_CR37","doi-asserted-by":"publisher","first-page":"277","DOI":"10.1261\/rna.2183803","volume":"9","author":"V Ambros","year":"2003","unstructured":"Ambros V, Bartel B, Bartel DP, Burge CB, Carrington JC, Chen X, Dreyfuss G, Eddy SR, Griffiths-Jones S, Marshall M, Matzke M, Ruvkun G, Tuschl T: A uniform system for microRNA annotation. RNA 2003, 9(3):277\u2013279. 10.1261\/rna.2183803","journal-title":"RNA"},{"key":"3592_CR38","doi-asserted-by":"publisher","first-page":"109","DOI":"10.1093\/nar\/gkh023","volume":"32","author":"S Griffiths-Jones","year":"2004","unstructured":"Griffiths-Jones S: The microRNA Registry. Nucleic Acids Res 2004, 32: 109\u2013111. 10.1093\/nar\/gkh023","journal-title":"Nucleic Acids Res"},{"key":"3592_CR39","volume-title":"LMU, Munich","author":"G Csaba","year":"2008","unstructured":"Csaba G: syngrep - Fast synonym-based named entity recognition, Personal communication. LMU, Munich 2008."},{"key":"3592_CR40","doi-asserted-by":"publisher","first-page":"333","DOI":"10.1145\/360825.360855","volume":"18","author":"VA Aho","year":"1975","unstructured":"Aho VA, Corasick MJ: Efficient string matching: An aid to bibliographic search. Communications of the ACM 1975, 18: 333\u2013340. 10.1145\/360825.360855","journal-title":"Communications of the ACM"},{"key":"3592_CR41","doi-asserted-by":"publisher","first-page":"5","DOI":"10.1093\/nar\/gkn741","volume":"37","author":"EW Sayers","year":"2009","unstructured":"Sayers EW, Barrett T, Benson DA, Bryant SH, Canese K, Chetvernin V, Church DM, DiCuccio M, Edgar R, Federhen S, Feolo M, Geer LY, Helmberg W, Kapustin Y, Landsman D, Lipman DJ, Madden TL, Maglott DR, Miller V, Mizrachi I, Ostell J, Pruitt KD, Schuler GD, Sequeira E, Sherry ST, Shumway M, Sirotkin K, Souvorov A, Starchenko G, Tatusova TA, Wagner L, Yaschenko E, Ye J: Database resources of the National Center for Biotechnology Information. Nucleic Acids Res 2009, 37: 5\u201315. 10.1093\/nar\/gkn741","journal-title":"Nucleic Acids Res"},{"key":"3592_CR42","doi-asserted-by":"publisher","first-page":"D258","DOI":"10.1093\/nar\/gkh066","volume":"32","author":"MA Harris","year":"2004","unstructured":"Harris MA, Clark J, Ireland A, Lomax J, Ashburner M, Foulger R, Eilbeck K, Lewis S, Marshall B, Mungall C, Richter J, Rubin GM, Blake JA, Bult C, Dolan M, Drabkin H, Eppig JT, Hill DP, Ni L, Ringwald M, Balakrishnan R, Cherry JM, Christie KR, Costanzo MC, Dwight SS, Engel S, Fisk DG, Hirschman JE, Hong EL, Nash RS, Sethuraman A, Theesfeld CL, Botstein D, Dolinski K, Feierbach B, Berardini T, Mundodi S, Rhee SY, Apweiler R, Barrell D, Camon E, Dimmer E, Lee V, Chisholm R, Gaudet P, Kibbe W, Kishore R, Schwarz EM, Sternberg P, Gwinn M, Hannick L, Wortman J, Berriman M, Wood V, de la Cruz N, Tonellato P, Jaiswal P, Seigfried T, White R, Gene Ontology Consortium: The Gene Ontology (GO) database and informatics resource. Nucleic Acids Res 2004, 32: D258\u201361. 10.1093\/nar\/gkh066","journal-title":"Nucleic Acids Res"},{"key":"3592_CR43","first-page":"1203","volume-title":"Software: Practice and Experience","author":"ER Gansner","year":"2000","unstructured":"Gansner ER, North SC: An open graph visualization system and its applications to software engineering. Software: Practice and Experience 2000, 1203\u20131233. 10.1002\/1097-024X(200009)30:11<1203::AID-SPE338>3.0.CO;2-N"},{"issue":"7 Pt 1","key":"3592_CR44","doi-asserted-by":"publisher","first-page":"2014","DOI":"10.1158\/1078-0432.CCR-05-1853","volume":"12","author":"Y Xi","year":"2006","unstructured":"Xi Y, Shalgi R, Fodstad O, Pilpel Y, Ju J: Differentially regulated micro-RNAs and actively translated messenger RNA transcripts by tumor suppressor p53 in colon cancer. Clin Cancer Res 2006, 12(7 Pt 1):2014\u201324. 10.1158\/1078-0432.CCR-05-1853","journal-title":"Clin Cancer Res"}],"container-title":["BMC Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1186\/1471-2105-11-135.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2021,9,1]],"date-time":"2021-09-01T12:15:40Z","timestamp":1630498540000},"score":1,"resource":{"primary":{"URL":"https:\/\/bmcbioinformatics.biomedcentral.com\/articles\/10.1186\/1471-2105-11-135"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2010,3,16]]},"references-count":44,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2010,12]]}},"alternative-id":["3592"],"URL":"https:\/\/doi.org\/10.1186\/1471-2105-11-135","relation":{},"ISSN":["1471-2105"],"issn-type":[{"value":"1471-2105","type":"electronic"}],"subject":[],"published":{"date-parts":[[2010,3,16]]},"assertion":[{"value":"28 September 2009","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"16 March 2010","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"16 March 2010","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}}],"article-number":"135"}}