{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,11]],"date-time":"2025-11-11T12:54:55Z","timestamp":1762865695168,"version":"3.37.3"},"reference-count":34,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2010,5,18]],"date-time":"2010-05-18T00:00:00Z","timestamp":1274140800000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/2.0"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["BMC Bioinformatics"],"published-print":{"date-parts":[[2010,12]]},"DOI":"10.1186\/1471-2105-11-260","type":"journal-article","created":{"date-parts":[[2010,6,23]],"date-time":"2010-06-23T18:13:59Z","timestamp":1277316839000},"source":"Crossref","is-referenced-by-count":28,"title":["Screensaver: an open source lab information management system (LIMS) for high throughput screening facilities"],"prefix":"10.1186","volume":"11","author":[{"given":"Andrew N","family":"Tolopko","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"John P","family":"Sullivan","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sean D","family":"Erickson","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"David","family":"Wrobel","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Su L","family":"Chiang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Katrina","family":"Rudnicki","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Stewart","family":"Rudnicki","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jennifer","family":"Nale","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Laura M","family":"Selfors","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Dara","family":"Greenhouse","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jeremy L","family":"Muhlich","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Caroline E","family":"Shamu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2010,5,18]]},"reference":[{"key":"3717_CR1","doi-asserted-by":"crossref","unstructured":"The academic pursuit of screening Nature Chemical Biology 2007, 3: 433. Editorial Editorial 10.1038\/nchembio0807-433","DOI":"10.1038\/nchembio0807-433"},{"key":"3717_CR2","doi-asserted-by":"publisher","first-page":"7","DOI":"10.1534\/genetics.106.069963","volume":"175","author":"N Perrimon","year":"2007","unstructured":"Perrimon N, Mathey-Prevot B: Applications of high-throughput RNA interference screens to problems in cell and developmental biology. Genetics 2007, 175: 7\u201316. 10.1534\/genetics.106.069963","journal-title":"Genetics"},{"key":"3717_CR3","doi-asserted-by":"publisher","first-page":"554","DOI":"10.1038\/nrg2364","volume":"9","author":"M Boutros","year":"2008","unstructured":"Boutros M, Ahringer J: The art and design of genetic screens: RNA interference. Nature Reviews Genetics 2008, 9: 554\u2013566. 10.1038\/nrg2364","journal-title":"Nature Reviews Genetics"},{"key":"3717_CR4","unstructured":"Shamu CE: ICCB-Longwood home page.[ http:\/\/iccb.med.harvard.edu\/ ]"},{"key":"3717_CR5","unstructured":"National Small Molecule Screening and Medicinal Chemistry Core (NSRB)[ http:\/\/nerce.med.harvard.edu\/nsrb.html ]"},{"key":"3717_CR6","unstructured":"Romiti M, Sayers E, Pham V, Wheeler D: PubChem: An Entrez Database of Small Molecules.[ http:\/\/www.ncbi.nlm.nih.gov\/Web\/Newsltr\/SummerFall04\/pubchem.html ]"},{"key":"3717_CR7","doi-asserted-by":"publisher","first-page":"D489","DOI":"10.1093\/nar\/gkj114","volume":"34","author":"I Flockhart","year":"2006","unstructured":"Flockhart I, Booker M, Kiger A, Boutros M, Armknecht S, Ramadan N, Richardson K, Xu A, Perrimon N, Mathey-Prevot B: FlyRNAi: the Drosophila RNAi screening center database. Nucleic Acids Res 2006, 34: D489\u2013494. 10.1093\/nar\/gkj114","journal-title":"Nucleic Acids Res"},{"key":"3717_CR8","doi-asserted-by":"publisher","first-page":"D448","DOI":"10.1093\/nar\/gkp1038","volume":"38","author":"M Gilsdorf","year":"2010","unstructured":"Gilsdorf M, Horn T, Arziman Z, Pelz O, Kiner E, Boutros M: GenomeRNAi: a database for cell-based RNAi phenotypes. 2009 update. Nucleic Acids Res 2010, 38: D448\u2013452. 10.1093\/nar\/gkp1038","journal-title":"Nucleic Acids Res"},{"key":"3717_CR9","unstructured":"ChEMBL Database[ http:\/\/www.ebi.ac.uk\/chembldb\/ ]"},{"key":"3717_CR10","doi-asserted-by":"publisher","first-page":"D351","DOI":"10.1093\/nar\/gkm843","volume":"36","author":"K Seiler","year":"2008","unstructured":"Seiler K, George G, Happ M, Bodycombe N, Carrinski H, Norton S, Brudz S, Sullivan J, Muhlich J, Serrano M, Ferraiolo P, Tolliday N, Schreiber S, Clemons P: ChemBank: a small-molecule screening and cheminformatics resource database. Nucleic Acids Res 2008, 36: D351\u2013359. 10.1093\/nar\/gkm843","journal-title":"Nucleic Acids Res"},{"key":"3717_CR11","unstructured":"PostgreSQL[ http:\/\/www.postgresql.org\/ ]"},{"key":"3717_CR12","unstructured":"Hibernate Object Relational Mapping framework[ http:\/\/www.hibernate.org\/ ]"},{"key":"3717_CR13","unstructured":"Spring application framework[ http:\/\/www.springsource.org\/ ]"},{"key":"3717_CR14","unstructured":"Apache MyFaces[ http:\/\/myfaces.apache.org\/ ]"},{"key":"3717_CR15","unstructured":"Facelets[ https:\/\/facelets.dev.java.net\/ ]"},{"key":"3717_CR16","unstructured":"Apache Tomcat[ http:\/\/tomcat.apache.org\/ ]"},{"key":"3717_CR17","volume-title":"Domain-Driven Design: Tackling Complexity In the Heart of Software","author":"E Evans","year":"2003","unstructured":"Evans E: Domain-Driven Design: Tackling Complexity In the Heart of Software. Boston, MA, USA: Addison-Wesley Longman Publishing Co.,Inc; 2003."},{"key":"3717_CR18","first-page":"116","volume-title":"Patterns of Enterprise Application Architecture","author":"M Fowler","year":"2003","unstructured":"Fowler M: Domain Model. In Patterns of Enterprise Application Architecture. Boston, MA, USA: Addison-Wesley Professional; 2003:116\u2013124."},{"key":"3717_CR19","doi-asserted-by":"crossref","first-page":"31","DOI":"10.1021\/ci00057a005","volume":"28","author":"D Weininger","year":"1988","unstructured":"Weininger D: SMILES, a chemical language and information system. 1. Introduction to methodology and encoding rules. Journal of Chemical Information and Computer Sciences 1988, 28: 31\u201336. doi=10.1021\/ci00057a005 [ http:\/\/dx.doi.org\/10.1021\/ci00057a005 ] doi=10.1021\/ci00057a005","journal-title":"Journal of Chemical Information and Computer Sciences"},{"key":"3717_CR20","first-page":"131","volume-title":"Nimes International Chemical Information Conference Proceedings","author":"SE Stein","year":"2003","unstructured":"Stein SE, Heller SR, Tchekhovski D: An Open Standard for Chemical Structure Representation - The IUPAC Chemical Identifier. Nimes International Chemical Information Conference Proceedings 2003, 131\u2013143."},{"key":"3717_CR21","doi-asserted-by":"publisher","first-page":"26","DOI":"10.1093\/nar\/gkl993","volume":"35","author":"D Maglott","year":"2007","unstructured":"Maglott D, Ostell J, Pruitt K, Tatusova T: Entrez Gene: gene-centered information at NCBI. Nucleic Acids Res 2007, 35: 26\u201331. 10.1093\/nar\/gkl993","journal-title":"Nucleic Acids Res"},{"key":"3717_CR22","doi-asserted-by":"publisher","first-page":"25","DOI":"10.1093\/nar\/gkm929","volume":"36","author":"D Benson","year":"2008","unstructured":"Benson D, Karsch-Mizrachi I, Lipman D, Ostell J, Wheeler D: GenBank. Nucleic Acids Res 2008, 36: 25\u201330. 10.1093\/nar\/gkm929","journal-title":"Nucleic Acids Res"},{"issue":"3","key":"3717_CR23","doi-asserted-by":"crossref","first-page":"244","DOI":"10.1021\/ci00007a012","volume":"32","author":"A Dalby","year":"1992","unstructured":"Dalby A, Nourse J, Hounshell W, Gushurst A, Grier D, Leland B, Laufer J: Description of several chemical structure file formats used by computer programs developed at Molecular Design Limited. Journal of Chemical Information and Computer Sciences 1992, 32(3):244\u201355.","journal-title":"Journal of Chemical Information and Computer Sciences"},{"key":"3717_CR24","doi-asserted-by":"publisher","first-page":"889","DOI":"10.1038\/nbt.1411","volume":"26","author":"C Taylor","year":"2008","unstructured":"Taylor C, D F, S S: Promoting coherent minimum reporting guidelines for biological and biomedical investigations: the MIBBI project. Nature Biotechnology 2008, 26: 889\u2013896. 10.1038\/nbt.1411","journal-title":"Nature Biotechnology"},{"key":"3717_CR25","unstructured":"MIBBI: Minimum Information for Biological and Biomedical Investigations[ http:\/\/www.mibbi.org\/index.php\/ ]"},{"key":"3717_CR26","unstructured":"MIACA: Minimum Information About a Cellular Assay[ http:\/\/www.mibbi.org\/index.php\/Projects\/MIACA ]"},{"key":"3717_CR27","unstructured":"MIARE: Minimum Information About an RNAi Experiment[ http:\/\/www.mibbi.org\/index.php\/Projects\/MIARE ]"},{"key":"3717_CR28","unstructured":"Netherlands Cancer Institute[ http:\/\/www.nki.nl\/Research\/ ]"},{"key":"3717_CR29","unstructured":"A*STAR Institute of Molecular and Cell Biology[ http:\/\/www.imcb.a-star.edu.sg\/ ]"},{"key":"3717_CR30","unstructured":"A*STAR Bioinformatics Institute[ http:\/\/www.bii.a-star.edu.sg\/ ]"},{"key":"3717_CR31","unstructured":"High Throughput Screening & Translational Research Facility, Fox Chase Cancer Center[ http:\/\/www.fccc.edu\/research\/facilities\/biotechnology\/highThroughput\/ ]"},{"key":"3717_CR32","unstructured":"Institute of Genomics and Systems Biology, The University of Chicago, Argonne National Laboratory[ http:\/\/www.igsb.anl.gov\/ ]"},{"issue":"7","key":"3717_CR33","doi-asserted-by":"publisher","first-page":"R66","DOI":"10.1186\/gb-2006-7-7-r66","volume":"7","author":"M Boutros","year":"2006","unstructured":"Boutros M, Bras L, Huber W: Analysis of cell-based RNAi screens. Genome Biology 2006, 7(7):R66. [ http:\/\/genomebiology.com\/2006\/7\/7\/R66 ] 10.1186\/gb-2006-7-7-r66","journal-title":"Genome Biology"},{"key":"3717_CR34","unstructured":"PubChem BioAssay[ http:\/\/www.ncbi.nlm.nih.gov\/sites\/entrez?db=pcassay ]"}],"container-title":["BMC Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/1471-2105-11-260.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1186\/1471-2105-11-260\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/1471-2105-11-260.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,3,27]],"date-time":"2024-03-27T20:01:39Z","timestamp":1711569699000},"score":1,"resource":{"primary":{"URL":"https:\/\/bmcbioinformatics.biomedcentral.com\/articles\/10.1186\/1471-2105-11-260"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2010,5,18]]},"references-count":34,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2010,12]]}},"alternative-id":["3717"],"URL":"https:\/\/doi.org\/10.1186\/1471-2105-11-260","relation":{},"ISSN":["1471-2105"],"issn-type":[{"type":"electronic","value":"1471-2105"}],"subject":[],"published":{"date-parts":[[2010,5,18]]},"article-number":"260"}}