{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,7]],"date-time":"2025-11-07T18:58:08Z","timestamp":1762541888768},"reference-count":22,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2010,1,14]],"date-time":"2010-01-14T00:00:00Z","timestamp":1263427200000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/2.0"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["BMC Bioinformatics"],"published-print":{"date-parts":[[2010,12]]},"DOI":"10.1186\/1471-2105-11-29","type":"journal-article","created":{"date-parts":[[2010,1,14]],"date-time":"2010-01-14T19:16:00Z","timestamp":1263496560000},"source":"Crossref","is-referenced-by-count":14,"title":["miRMaid: a unified programming interface for microRNA data resources"],"prefix":"10.1186","volume":"11","author":[{"given":"Anders","family":"Jacobsen","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Anders","family":"Krogh","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sakari","family":"Kauppinen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Morten","family":"Lindow","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2010,1,14]]},"reference":[{"key":"3486_CR1","doi-asserted-by":"publisher","first-page":"281","DOI":"10.1016\/S0092-8674(04)00045-5","volume":"116","author":"DP Bartel","year":"2004","unstructured":"Bartel DP: MicroRNAs: Genomics, Biogenesis, Mechanism, and Function. Cell 2004, 116: 281\u2013297. 10.1016\/S0092-8674(04)00045-5","journal-title":"Cell"},{"key":"3486_CR2","doi-asserted-by":"publisher","first-page":"452","DOI":"10.1016\/j.ceb.2009.04.009","volume":"21","author":"M Chekulaeva","year":"2009","unstructured":"Chekulaeva M, Filipowicz W: Mechanisms of miRNA-mediated post-transcriptional regulation in animal cells. Current Opinion in Cell Biology 2009, 21: 452\u2013460. 10.1016\/j.ceb.2009.04.009","journal-title":"Current Opinion in Cell Biology"},{"key":"3486_CR3","doi-asserted-by":"publisher","first-page":"2485","DOI":"10.4161\/cc.7.16.6453","volume":"7","author":"PP Medina","year":"2008","unstructured":"Medina PP, Slack FJ: microRNAs and cancer: an overview. Cell Cycle 2008, 7: 2485\u20132492.","journal-title":"Cell Cycle"},{"key":"3486_CR4","doi-asserted-by":"publisher","first-page":"393","DOI":"10.1158\/0008-5472.CAN-08-2749","volume":"69","author":"A Petri","year":"2009","unstructured":"Petri A, Lindow M, Kauppinen S: MicroRNA silencing in primates: towards development of novel therapeutics. Cancer Res 2009, 69: 393\u2013395. 10.1158\/0008-5472.CAN-08-2749","journal-title":"Cancer Res"},{"key":"3486_CR5","doi-asserted-by":"publisher","first-page":"D154","DOI":"10.1093\/nar\/gkm952","volume":"36","author":"S Griffiths-Jones","year":"2008","unstructured":"Griffiths-Jones S, Saini HK, van Dongen S, Enright AJ: miRBase: tools for microRNA genomics. Nucleic Acids Res 2008, 36: D154\u2013158. 10.1093\/nar\/gkm952","journal-title":"Nucleic Acids Res"},{"key":"3486_CR6","doi-asserted-by":"publisher","first-page":"277","DOI":"10.1261\/rna.2183803","volume":"9","author":"V Ambros","year":"2003","unstructured":"Ambros V, Bartel B, Bartel DP, et al.: A uniform system for microRNA annotation. RNA 2003, 9: 277\u2013279. 10.1261\/rna.2183803","journal-title":"RNA"},{"key":"3486_CR7","doi-asserted-by":"publisher","first-page":"D111","DOI":"10.1093\/nar\/gkn707","volume":"37","author":"D Gerlach","year":"2009","unstructured":"Gerlach D, Kriventseva EV, Rahman N, Vejnar CE, Zdobnov EM: miROrtho: computational survey of microRNA genes. Nucleic Acids Res 2009, 37: D111\u2013117. 10.1093\/nar\/gkn707","journal-title":"Nucleic Acids Res"},{"key":"3486_CR8","doi-asserted-by":"publisher","first-page":"D149","DOI":"10.1093\/nar\/gkl904","volume":"35","author":"M Megraw","year":"2007","unstructured":"Megraw M, Sethupathy P, Corda B, Hatzigeorgiou AG: miRGen: a database for the study of animal microRNA genomic organization and function. Nucleic Acids Res 2007, 35: D149\u2013155. 10.1093\/nar\/gkl904","journal-title":"Nucleic Acids Res"},{"key":"3486_CR9","doi-asserted-by":"publisher","first-page":"D41","DOI":"10.1093\/nar\/gkn702","volume":"37","author":"C Taccioli","year":"2009","unstructured":"Taccioli C, Fabbri E, Visone R, et al.: UCbase & miRfunc: a database of ultraconserved sequences and microRNA function. Nucleic Acids Res 2009, 37: D41\u201348. 10.1093\/nar\/gkn702","journal-title":"Nucleic Acids Res"},{"key":"3486_CR10","doi-asserted-by":"publisher","first-page":"D47","DOI":"10.1093\/nar\/gkm949","volume":"36","author":"A Levy","year":"2008","unstructured":"Levy A, Sela N, Ast G: TranspoGene and microTranspoGene: transposed elements influence on the transcriptome of seven vertebrates and invertebrates. Nucleic Acids Res 2008, 36: D47\u201352. 10.1093\/nar\/gkm949","journal-title":"Nucleic Acids Res"},{"key":"3486_CR11","doi-asserted-by":"publisher","first-page":"20","DOI":"10.1016\/j.cell.2004.12.035","volume":"120","author":"B Lewis","year":"2005","unstructured":"Lewis B, Burge C, Bartel D: Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell 2005, 120: 20. 15. 15. 10.1016\/j.cell.2004.12.035","journal-title":"Cell"},{"key":"3486_CR12","doi-asserted-by":"publisher","first-page":"D165","DOI":"10.1093\/nar\/gkm1012","volume":"36","author":"S Hsu","year":"2008","unstructured":"Hsu S, Chu C, Tsou A, et al.: miRNAMap 2.0: genomic maps of microRNAs in metazoan genomes. Nucleic Acids Res 2008, 36: D165\u2013169. 10.1093\/nar\/gkm1012","journal-title":"Nucleic Acids Res"},{"key":"3486_CR13","doi-asserted-by":"publisher","first-page":"D149","DOI":"10.1093\/nar\/gkm995","volume":"36","author":"D Betel","year":"2008","unstructured":"Betel D, Wilson M, Gabow A, Marks DS, Sander C: The microRNA.org resource: targets and expression. Nucleic Acids Res 2008, 36: D149\u2013153. 10.1093\/nar\/gkm995","journal-title":"Nucleic Acids Res"},{"key":"3486_CR14","doi-asserted-by":"publisher","first-page":"1012","DOI":"10.1261\/rna.965408","volume":"14","author":"X Wang","year":"2008","unstructured":"Wang X: miRDB: a microRNA target prediction and functional annotation database with a wiki interface. RNA 2008, 14: 1012\u20131017. 10.1261\/rna.965408","journal-title":"RNA"},{"key":"3486_CR15","doi-asserted-by":"publisher","first-page":"D105","DOI":"10.1093\/nar\/gkn851","volume":"37","author":"F Xiao","year":"2009","unstructured":"Xiao F, Zuo Z, Cai G, et al.: miRecords: an integrated resource for microRNA-target interactions. Nucleic Acids Res 2009, 37: D105\u2013110. 10.1093\/nar\/gkn851","journal-title":"Nucleic Acids Res"},{"key":"3486_CR16","doi-asserted-by":"publisher","first-page":"D155","DOI":"10.1093\/nar\/gkn809","volume":"37","author":"GL Papadopoulos","year":"2009","unstructured":"Papadopoulos GL, Reczko M, Simossis VA, Sethupathy P, Hatzigeorgiou AG: The database of experimentally supported targets: a functional update of TarBase. Nucleic Acids Res 2009, 37: D155\u20138. 10.1093\/nar\/gkn809","journal-title":"Nucleic Acids Res"},{"key":"3486_CR17","doi-asserted-by":"publisher","first-page":"D98","DOI":"10.1093\/nar\/gkn714","volume":"37","author":"Q Jiang","year":"2009","unstructured":"Jiang Q, Wang Y, Hao Y, et al.: miR2Disease: a manually curated database for microRNA deregulation in human disease. Nucleic Acids Res 2009, 37: D98\u2013104. 10.1093\/nar\/gkn714","journal-title":"Nucleic Acids Res"},{"key":"3486_CR18","doi-asserted-by":"publisher","first-page":"1991","DOI":"10.1093\/bioinformatics\/btp299","volume":"25","author":"GL Papadopoulos","year":"2009","unstructured":"Papadopoulos GL, Alexiou P, Maragkakis M, Reczko M, Hatzigeorgiou AG: DIANA-mirPath: Integrating human and mouse microRNAs in pathways. Bioinformatics 2009, 25: 1991\u20131993. 10.1093\/bioinformatics\/btp299","journal-title":"Bioinformatics"},{"key":"3486_CR19","doi-asserted-by":"publisher","first-page":"W356","DOI":"10.1093\/nar\/gkp294","volume":"37","author":"S Nam","year":"2009","unstructured":"Nam S, Li M, Choi K, et al.: MicroRNA and mRNA integrated analysis (MMIA): a web tool for examining biological functions of microRNA expression. Nucleic Acids Res 2009, 37: W356\u2013362. 10.1093\/nar\/gkp294","journal-title":"Nucleic Acids Res"},{"key":"3486_CR20","doi-asserted-by":"publisher","first-page":"115","DOI":"10.1145\/514183.514185","volume":"2","author":"RT Fielding","year":"2002","unstructured":"Fielding RT, Taylor RN: Principled design of the modern Web architecture. ACM Trans Internet Technol 2002, 2: 115\u2013150. 10.1145\/514183.514185","journal-title":"ACM Trans Internet Technol"},{"key":"3486_CR21","volume-title":"Version 2.10.1","author":"R Development Core Team","year":"2009","unstructured":"R Development Core Team: R: A Language and Environment for Statistical Computing. Version 2.10.1 2009."},{"key":"3486_CR22","doi-asserted-by":"publisher","first-page":"D98","DOI":"10.1093\/nar\/gkn714","volume":"37","author":"Q Jiang","year":"2009","unstructured":"Jiang Q, Wang Y, Hao Y, et al.: miR2Disease: a manually curated database for microRNA deregulation in human disease. Nucleic Acids Res 2009, 37: D98-D104. 10.1093\/nar\/gkn714","journal-title":"Nucleic Acids Res"}],"container-title":["BMC Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/1471-2105-11-29.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1186\/1471-2105-11-29\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/1471-2105-11-29.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,1,22]],"date-time":"2019-01-22T12:41:29Z","timestamp":1548160889000},"score":1,"resource":{"primary":{"URL":"https:\/\/bmcbioinformatics.biomedcentral.com\/articles\/10.1186\/1471-2105-11-29"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2010,1,14]]},"references-count":22,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2010,12]]}},"alternative-id":["3486"],"URL":"https:\/\/doi.org\/10.1186\/1471-2105-11-29","relation":{},"ISSN":["1471-2105"],"issn-type":[{"value":"1471-2105","type":"electronic"}],"subject":[],"published":{"date-parts":[[2010,1,14]]},"article-number":"29"}}