{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2023,2,11]],"date-time":"2023-02-11T15:27:00Z","timestamp":1676129220836},"reference-count":13,"publisher":"Springer Science and Business Media LLC","issue":"S1","license":[{"start":{"date-parts":[[2011,2,15]],"date-time":"2011-02-15T00:00:00Z","timestamp":1297728000000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/2.0"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["BMC Bioinformatics"],"published-print":{"date-parts":[[2011,12]]},"DOI":"10.1186\/1471-2105-12-s1-s42","type":"journal-article","created":{"date-parts":[[2011,2,18]],"date-time":"2011-02-18T15:15:03Z","timestamp":1298042103000},"source":"Crossref","is-referenced-by-count":3,"title":["A method for supporting retrieval of articles on protein structure analysis considering users\u2019 intention"],"prefix":"10.1186","volume":"12","author":[{"given":"Riku","family":"Kyogoku","sequence":"first","affiliation":[]},{"given":"Ryo","family":"Fujimoto","sequence":"additional","affiliation":[]},{"given":"Tomonobu","family":"Ozaki","sequence":"additional","affiliation":[]},{"given":"Takenao","family":"Ohkawa","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2011,2,15]]},"reference":[{"key":"4400_CR1","unstructured":"Google Scholar[\n                    http:\/\/scholar.google.com\n                    \n                  ]"},{"key":"4400_CR2","unstructured":"CiteSeer[\n                    http:\/\/citeseer.ist.psu.edu\n                    \n                  ]"},{"key":"4400_CR3","unstructured":"GoPubMed[\n                    http:\/\/www.gopubmed.org\n                    \n                  ]"},{"key":"4400_CR4","doi-asserted-by":"publisher","first-page":"89","DOI":"10.1145\/276675.276685","volume-title":"Proceedings of the Third ACM Conference on Digital Libraries","author":"CL Giles","year":"1998","unstructured":"Giles CL, Bollacker KD, Lawrence S: CiteSeer: An Automatic Citation Indexing System. Proceedings of the Third ACM Conference on Digital Libraries 1998, 89\u201398."},{"key":"4400_CR5","doi-asserted-by":"publisher","first-page":"W783","DOI":"10.1093\/nar\/gki470","volume":"33","author":"A Doms","year":"2005","unstructured":"Doms A, Schroeder M: GoPubMed: exploring PubMed with the Gene Ontology. Nucleic Acids Research 2005, 33: W783-W786. 10.1093\/nar\/gki470","journal-title":"Nucleic Acids Research"},{"key":"4400_CR6","doi-asserted-by":"publisher","first-page":"D262","DOI":"10.1093\/nar\/gki058","volume":"33","author":"S Velankar","year":"2005","unstructured":"Velankar S, McNeil P, Mittard-Runte V, Suarez A, Barrell D, Apweiler R, K H: E-MSD: an integrated data resource for bioinformatics. Nucleic Acids Res 2005, 33: D262\u2013265. 10.1093\/nar\/gki058","journal-title":"Nucleic Acids Res"},{"key":"4400_CR7","doi-asserted-by":"publisher","first-page":"391","DOI":"10.1186\/1471-2105-9-391","volume":"9","author":"F David","year":"2008","unstructured":"David F, Yip Y: A new UniProt-PDB mapping resource for the curation of structural-related information in the UniProt\/Swiss-Prot Knowledge-base. BMC Bioinformatics 2008, 9: 391. 10.1186\/1471-2105-9-391","journal-title":"BMC Bioinformatics"},{"key":"4400_CR8","doi-asserted-by":"publisher","first-page":"i529","DOI":"10.1093\/bioinformatics\/btm195","volume":"23","author":"Y Tao","year":"2007","unstructured":"Tao Y, Sam L, Li J, Friedman C, Lussier YA: Information theory applied to the sparse gene ontology annotation network to predict novel gene function. Bioinformatics 2007, 23: i529\u2013538. 10.1093\/bioinformatics\/btm195","journal-title":"Bioinformatics"},{"key":"4400_CR9","doi-asserted-by":"publisher","first-page":"2163","DOI":"10.1093\/bioinformatics\/btm291","volume":"23","author":"H Yu","year":"2007","unstructured":"Yu H, Jansen R, Stolovitzky G, Gerstein M: Total ancestry measure: quantifying the similarity in tree-like classification, with genomic applications. Bioinformatics 2007, 23: 2163\u20132173. 10.1093\/bioinformatics\/btm291","journal-title":"Bioinformatics"},{"key":"4400_CR10","doi-asserted-by":"publisher","first-page":"1274","DOI":"10.1093\/bioinformatics\/btm087","volume":"23","author":"JZ Wang","year":"2007","unstructured":"Wang JZ, Du Z, Payattakool R, S YP, C C: A new method to measure the semantic similarity of GO terms. Bioinformatics 2007, 23: 1274\u20131281. 10.1093\/bioinformatics\/btm087","journal-title":"Bioinformatics"},{"key":"4400_CR11","doi-asserted-by":"publisher","DOI":"10.1017\/CBO9780511809071","volume-title":"Introduction to Information Retrieval","author":"CD Manning","year":"2008","unstructured":"Manning CD, Raghavan P, Sch\u00fctze H: Introduction to Information Retrieval. Cambridge University Press; 2008."},{"key":"4400_CR12","doi-asserted-by":"publisher","first-page":"93","DOI":"10.2197\/ipsjtbio.2.93","volume":"2","author":"K Miyanishi","year":"2009","unstructured":"Miyanishi K, Ozaki T, Ohkawa T: Selection of Effective Sentences from a Corpus to Improve the Accuracy of Identification of Protein Names. IPSJ Transactions on Bioinformatics 2009, 2: 93\u2013109. 10.2197\/ipsjtbio.2.93","journal-title":"IPSJ Transactions on Bioinformatics"},{"key":"4400_CR13","first-page":"183","volume":"178","author":"K Miyanishi","year":"2010","unstructured":"Miyanishi K, Ozaki T, Ohkawa T: A Method to Identify Protein Names with Iterative Extension of Training Data Set. Proceedings of the 2nd International Conference on Bioinformatics and Computational Biology 2010, 178:-183.","journal-title":"Proceedings of the 2nd International Conference on Bioinformatics and Computational Biology"}],"container-title":["BMC Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/1471-2105-12-S1-S42.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1186\/1471-2105-12-S1-S42\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/1471-2105-12-S1-S42.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,1,23]],"date-time":"2019-01-23T05:27:53Z","timestamp":1548221273000},"score":1,"resource":{"primary":{"URL":"https:\/\/bmcbioinformatics.biomedcentral.com\/articles\/10.1186\/1471-2105-12-S1-S42"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2011,2,15]]},"references-count":13,"journal-issue":{"issue":"S1","published-print":{"date-parts":[[2011,12]]}},"alternative-id":["4400"],"URL":"https:\/\/doi.org\/10.1186\/1471-2105-12-s1-s42","relation":{},"ISSN":["1471-2105"],"issn-type":[{"value":"1471-2105","type":"electronic"}],"subject":[],"published":{"date-parts":[[2011,2,15]]},"article-number":"S42"}}