{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,5,14]],"date-time":"2026-05-14T11:05:55Z","timestamp":1778756755861,"version":"3.51.4"},"reference-count":21,"publisher":"Springer Science and Business Media LLC","issue":"1","content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["BMC Bioinformatics"],"DOI":"10.1186\/1471-2105-3-36","type":"journal-article","created":{"date-parts":[[2002,12,11]],"date-time":"2002-12-11T12:08:19Z","timestamp":1039608499000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":85,"title":["Clustering of the SOM easily reveals distinct gene expression patterns: results of a reanalysis of lymphoma study"],"prefix":"10.1186","volume":"3","author":[{"given":"Junbai","family":"Wang","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jan","family":"Delabie","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hans Christian","family":"Aasheim","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Erlend","family":"Smeland","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ola","family":"Myklebost","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2002,11,24]]},"reference":[{"key":"46_CR1","doi-asserted-by":"publisher","first-page":"457","DOI":"10.1038\/ng1296-457","volume":"14","author":"J DeRisi","year":"1996","unstructured":"DeRisi J, Penland L, Brown PO, Bittner ML, Meltzer PS, Ray M, Chen Y, Su YA, Trent JM: Use of a cDNA microarray to analyze gene expression patterns in human cancer.\n                           Nat Genet 1996, 14: 457\u2013460.","journal-title":"Nat Genet"},{"key":"46_CR2","doi-asserted-by":"publisher","first-page":"14863","DOI":"10.1073\/pnas.95.25.14863","volume":"95","author":"MB Eisen","year":"1998","unstructured":"Eisen MB, Spellman PT, Brown PO, Botstein D: Cluster analysis and display of genome-wide expression patterns.\n                           Proc Natl Acad Sci USA 1998, 95: 14863\u201314868. 10.1073\/pnas.95.25.14863","journal-title":"Proc Natl Acad Sci USA"},{"key":"46_CR3","doi-asserted-by":"publisher","first-page":"83","DOI":"10.1126\/science.283.5398.83","volume":"283","author":"VR Iyer","year":"1999","unstructured":"Iyer VR, Eisen MB, Ross DT, Schuler G, Moore T, Lee JC, Trent JM, Staudt LM, Hudson J Jr, Boguski MS, Lashkari D, Shalon D, Botstein D, Brown PO: The transcriptional program in the response of human fibroblasts to serum.\n                           Science 1999, 283: 83\u201387. 10.1126\/science.283.5398.83","journal-title":"Science"},{"key":"46_CR4","doi-asserted-by":"publisher","first-page":"747","DOI":"10.1038\/35021093","volume":"406","author":"CM Perou","year":"2000","unstructured":"Perou CM, Sorlie T, Eisen MB, van de Rijn M, Jeffrey SS, Rees CA, Pollack JR, Ross DT, Johnsen H, Akslen LA, Fluge O, Pergamenschikov A, Williams C, Zhu SX, Lonning PE, Borresen-Dale AL, Brown PO, Botstein D: Molecular portraits of human breast tumours.\n                           Nature 2000, 406: 747\u2013752. 10.1038\/35021093","journal-title":"Nature"},{"key":"46_CR5","doi-asserted-by":"publisher","first-page":"2907","DOI":"10.1073\/pnas.96.6.2907","volume":"96","author":"P Tamayo","year":"1999","unstructured":"Tamayo P, Slonim D, Mesirov J, Zhu Q, Kitareewan S, Dmitrovsky E, Lander ES, Golub TR: Interpreting patterns of gene expression with self-organizing maps: methods and application to hematopoietic differentiation.\n                           Proc Natl Acad Sci USA 1999, 96: 2907\u20132912. 10.1073\/pnas.96.6.2907","journal-title":"Proc Natl Acad Sci USA"},{"key":"46_CR6","volume-title":"Finding groups in data, An introduction to cluster analysis.","author":"L Kufman","year":"1991","unstructured":"Kufman L, Rousseeuw PJ: Finding groups in data, An introduction to cluster analysis.\n                           (Edited by: Kuman L. Brussels). John Wiley & Sons 1991."},{"key":"46_CR7","doi-asserted-by":"publisher","first-page":"117","DOI":"10.1007\/978-3-642-97966-8","volume-title":"Self-organizing maps.","author":"T Kohonen","year":"1997","unstructured":"Kohonen T: Self-organizing maps.\n                           (Edited by: Lotsch HKV). Berlin, Springer 1997, 117."},{"key":"46_CR8","doi-asserted-by":"publisher","first-page":"142","DOI":"10.1016\/S0014-5793(99)00524-4","volume":"451","author":"P Toronen","year":"1999","unstructured":"Toronen P, Kolehmainen M, Wong G, Castren E: Analysis of gene expression data using self-organizing maps.\n                           FEBS Letters 1999, 451: 142\u2013146. 10.1016\/S0014-5793(99)00524-4","journal-title":"FEBS Letters"},{"key":"46_CR9","volume-title":"Practical statistics for medical research.","author":"DG Altman","year":"1991","unstructured":"Altman DG: Practical statistics for medical research.\n                           (Edited by: Altman DG). London, Chapman and Hall 1991."},{"key":"46_CR10","doi-asserted-by":"publisher","first-page":"503","DOI":"10.1038\/35000501","volume":"403","author":"AA Alizadeh","year":"2000","unstructured":"Alizadeh AA, Eisen MB, Davis RE, Ma C, Lossos IS, Rosenwald A, Boldrick JC, Sabet H, Tran T, Yu X, Powell JI, Yang L, Marti GE, Moore T, Hudson J Jr, Lu L, Lewis DB, Tibshirani R, Sherlock G, Chan WC, Greiner TC, Weisenburger DD, Armitage JO, Warnke R, Staudt LM: Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling. [see comments].\n                           Nature 2000, 403: 503\u2013511. 10.1038\/35000501","journal-title":"Nature"},{"key":"46_CR11","volume-title":"Intelligent Data Analysis journal","author":"J Vesanto","year":"1999","unstructured":"Vesanto J: SOM-Based data visualization methods.\n                           Intelligent Data Analysis journal 1999."},{"key":"46_CR12","volume-title":"Cluster Analysis.","author":"BS Everitt","year":"1987","unstructured":"Everitt BS: Cluster Analysis.\n                           (Edited by: Edward Arnold). London, John Wiley & Sons 1987."},{"key":"46_CR13","volume-title":"Supplementary informatioin for \"Reanalysis of global gene expression patterns from Diffuse Large B-Cell Lymphoma by a two-level strategy reveals novel subtypes\"","author":"wang Junbai","year":"2001","unstructured":"Junbai wang, Jan Delabie, Hans Christian Aasheim, Erlend Smeland, Ola Myklebost: Supplementary informatioin for \"Reanalysis of global gene expression patterns from Diffuse Large B-Cell Lymphoma by a two-level strategy reveals novel subtypes\".2001. [http:\/\/matrise.uio.no\/supDLBCL\/Supview.html]"},{"issue":"3","key":"46_CR14","doi-asserted-by":"publisher","first-page":"586","DOI":"10.1109\/72.846731","volume":"11","author":"J Vesanto","year":"2000","unstructured":"Vesanto J, Alhoniemi E: Clustering of the self-organizing map.\n                           IEEE TNN 2000, 11(3):586\u2013600. 10.1109\/72.846731","journal-title":"IEEE TNN"},{"key":"46_CR15","doi-asserted-by":"publisher","first-page":"300","DOI":"10.1038\/35085509","volume":"412","author":"AM Reimold","year":"2001","unstructured":"Reimold AM, Iwakoshi NN, Manis J, Vallabhajosyula P, Szomolanyi-Tsuda E, Gravallese EM, Friend D, Grusby MJ, Alt F, Glimcher LH: Plasma cell differentiation requires the transcription factor XBP-1.\n                           Nature 2001, 412: 300\u2013307. 10.1038\/35085509","journal-title":"Nature"},{"key":"46_CR16","doi-asserted-by":"publisher","first-page":"2548","DOI":"10.1038\/sj.onc.1203551","volume":"19","author":"T Hirano","year":"2000","unstructured":"Hirano T, Ishihara K, Hibi M: Roles of STAT3 in mediating the cell growth, differnetiation and survival signals relayed through the IL-6 family of cytokine receptors.\n                           Oncogene 2000, 19: 2548\u20132556. 10.1038\/sj.onc.1203551","journal-title":"Oncogene"},{"key":"46_CR17","doi-asserted-by":"publisher","first-page":"540","DOI":"10.1126\/science.275.5299.540","volume":"275","author":"HW Mittrucker","year":"1997","unstructured":"Mittrucker HW, Matsuyama T, Grossman A, Kundig TM, Potter J, Shahinian A, Wakeham A, Patterson B, Ohashi PS, Mak TW: Requirement for the transcription factor LSIRF\/IRF4 for mature B and T lymphocyte function.\n                           Science 1997, 275: 540\u2013543. 10.1126\/science.275.5299.540","journal-title":"Science"},{"key":"46_CR18","doi-asserted-by":"publisher","first-page":"673","DOI":"10.1038\/89044","volume":"7","author":"J Khan","year":"2001","unstructured":"Khan J, Wei JS, Ringner M, Saal LH, Ladanyi M, Westermann F, Berthold F, Schwab M, Antonescu CR, Peterson C, Meltzer PS: Classification and diagnostic prediction of cancers using gene expression profiling and artificial neural networks.\n                           Nat med 2001, 7: 673\u2013679. 10.1038\/89044","journal-title":"Nat med"},{"issue":"12","key":"46_CR19","doi-asserted-by":"publisher","first-page":"1143","DOI":"10.1093\/bioinformatics\/17.12.1143","volume":"17","author":"K Horimoto","year":"2001","unstructured":"Horimoto K, Toh H: Statistical estimation of cluster boundaries in gene expression profile data.\n                           Bioinformatics 2001, 17(12):1143\u20131151. 10.1093\/bioinformatics\/17.12.1143","journal-title":"Bioinformatics"},{"issue":"1","key":"46_CR20","doi-asserted-by":"publisher","first-page":"39","DOI":"10.1093\/bioinformatics\/18.1.39","volume":"18","author":"DV Nguyen","year":"2002","unstructured":"Nguyen DV, Rocke DM: Tumor classification by partial least squares using microarray gene expression data.\n                           Bioinformatics 2002, 18(1):39\u201350. 10.1093\/bioinformatics\/18.1.39","journal-title":"Bioinformatics"},{"key":"46_CR21","volume-title":"Introduction to statistical pattern recognition.","author":"K Fukunaga","year":"1990","unstructured":"Fukunaga K: Introduction to statistical pattern recognition.\n                           (Edited by: Rheinboldt W). Boston, Academic Press 1990."}],"container-title":["BMC Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1186\/1471-2105-3-36.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,9,13]],"date-time":"2024-09-13T15:51:37Z","timestamp":1726242697000},"score":1,"resource":{"primary":{"URL":"https:\/\/bmcbioinformatics.biomedcentral.com\/articles\/10.1186\/1471-2105-3-36"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2002,11,24]]},"references-count":21,"journal-issue":{"issue":"1","published-online":{"date-parts":[[2002,12]]}},"alternative-id":["46"],"URL":"https:\/\/doi.org\/10.1186\/1471-2105-3-36","relation":{},"ISSN":["1471-2105"],"issn-type":[{"value":"1471-2105","type":"electronic"}],"subject":[],"published":{"date-parts":[[2002,11,24]]},"assertion":[{"value":"14 June 2002","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"24 November 2002","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"24 November 2002","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}}],"article-number":"36"}}