{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,23]],"date-time":"2025-10-23T16:31:27Z","timestamp":1761237087917},"reference-count":16,"publisher":"Springer Science and Business Media LLC","issue":"1","content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["BMC Bioinformatics"],"DOI":"10.1186\/1471-2105-5-53","type":"journal-article","created":{"date-parts":[[2004,5,8]],"date-time":"2004-05-08T06:22:20Z","timestamp":1083997340000},"update-policy":"http:\/\/dx.doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":17,"title":["Statistical monitoring of weak spots for improvement of normalization and ratio estimates in microarrays"],"prefix":"10.1186","volume":"5","author":[{"given":"Igor","family":"Dozmorov","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Nicholas","family":"Knowlton","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yuhong","family":"Tang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Michael","family":"Centola","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2004,5,5]]},"reference":[{"key":"169_CR1","doi-asserted-by":"publisher","first-page":"8","DOI":"10.1006\/viro.1999.0044","volume":"266","author":"GK Geiss","year":"2000","unstructured":"Geiss GK, Bumgarner RE, An MC, Agy MB, van't Wout AB, Hammersmark E, Carter VS, Upchurch D, Mullins JI, Katze MG: Large-scale monitoring of host cell gene expression during HIV-1 infection using cDNA microarrays.\n                           Virology 2000, 266: 8\u201316. 10.1006\/viro.1999.0044","journal-title":"Virology"},{"key":"169_CR2","doi-asserted-by":"publisher","first-page":"239","DOI":"10.1152\/physiolgenomics.00141.2002","volume":"12","author":"I Dozmorov","year":"2003","unstructured":"Dozmorov I, Saban MR, Gerard NP, Lu B, Nguyen NB, Centola M, Saban R: Neurokinin 1 receptors and neprilysin modulation of mouse bladder generegulation.\n                           Physiol Genmics 2003, 12: 239\u2013250.","journal-title":"Physiol Genmics"},{"key":"169_CR3","doi-asserted-by":"publisher","first-page":"55","DOI":"10.1089\/10665270252833190","volume":"9","author":"C Kooperberg","year":"2002","unstructured":"Kooperberg C, Fazzio TG, Delrow JJ, Tsukiyama T: Improved background correction for spotted DNA microarrays.\n                           J Comput Biol 2002, 9: 55\u201366. 10.1089\/10665270252833190","journal-title":"J Comput Biol"},{"key":"169_CR4","doi-asserted-by":"publisher","first-page":"45","DOI":"10.1152\/physiolgenomics.00020.2001","volume":"7","author":"MC Yang","year":"2001","unstructured":"Yang MC, Ruan QG, Yang JJ, Eckenrode S, Wu S, McIndoe RA, She JX: A statistical method for flagging weak spots improves normalization and ratio estimates in microarrays.\n                           Physiol Genomics 2001, 7: 45\u201353.","journal-title":"Physiol Genomics"},{"key":"169_CR5","doi-asserted-by":"publisher","first-page":"1207","DOI":"10.1093\/bioinformatics\/18.9.1207","volume":"18","author":"Y Chen","year":"2002","unstructured":"Chen Y, Kamat V, Dougherty ER, Bittner ML, Meltzer PS, Trent JM: Ratio statistics of gene expression levels and applications to microarray data analysis.\n                           Bioinformatics 2002, 18: 1207\u201315. 10.1093\/bioinformatics\/18.9.1207","journal-title":"Bioinformatics"},{"key":"169_CR6","doi-asserted-by":"crossref","first-page":"282","DOI":"10.1101\/gr.9.3.282","volume":"9","author":"LD Greller","year":"1999","unstructured":"Greller LD, Tobin FL: Detecting selective expression of genes and proteins.\n                           Genome Res 1999, 9: 282\u2013296.","journal-title":"Genome Res"},{"key":"169_CR7","doi-asserted-by":"publisher","first-page":"389","DOI":"10.1038\/ng766","volume":"29","author":"W Jin","year":"2001","unstructured":"Jin W, Riley RM, Wolfinger RD, White KP, Passador-Gurgel G, Gibson G: The contributions of sex, genotype and age to transcriptional variance in Drosophila melanogaster.\n                           Nat Geneti 2001, 29: 389\u2013395. 10.1038\/ng766","journal-title":"Nat Geneti"},{"key":"169_CR8","doi-asserted-by":"publisher","first-page":"557","DOI":"10.1089\/106652701753307485","volume":"8","author":"DM Rocke","year":"2001","unstructured":"Rocke DM, Durbin BA: A model for measurement error for gene expression arrays.\n                           J Comput Biol 2001, 8: 557\u2013569. 10.1089\/106652701753307485","journal-title":"J Comput Biol"},{"issue":"Suppl 1","key":"169_CR9","doi-asserted-by":"publisher","first-page":"S323","DOI":"10.1093\/bioinformatics\/17.suppl_1.S323","volume":"17","author":"A Zien","year":"2001","unstructured":"Zien A, Aigner T, Zimmer R, Lengauer T: Centralization: a new method for the normalization of gene expression data.\n                           Bioinformatics 2001, 17(Suppl 1):S323\u201331.","journal-title":"Bioinformatics"},{"key":"169_CR10","doi-asserted-by":"publisher","first-page":"204","DOI":"10.1093\/bioinformatics\/19.2.204","volume":"19","author":"IM Dozmorov","year":"2003","unstructured":"Dozmorov IM, Centola M: An associative analysis of gene expression array data.\n                           Bioinformatics 2003, 19: 204\u201311. 10.1093\/bioinformatics\/19.2.204","journal-title":"Bioinformatics"},{"key":"169_CR11","doi-asserted-by":"publisher","first-page":"B72","DOI":"10.1093\/gerona\/56.2.B72","volume":"56","author":"I Dozmorov","year":"2001","unstructured":"Dozmorov I, Bartke A, Miller RA: Array-based expression analysis of mouse liver genes: Effect of age and of the longevity mutant Prop1df.\n                           J Gerontol A Biol Sci Med Sci 2001, 56: B72-B80.","journal-title":"J Gerontol A Biol Sci Med Sci"},{"key":"169_CR12","doi-asserted-by":"publisher","first-page":"224","DOI":"10.1038\/emm.2002.31","volume":"34","author":"JH Kim","year":"2002","unstructured":"Kim JH, Shin DM, Lee YS: Effect of local background intensities in the normalization of cDNA microarray data with a skewed expression profiles.\n                           Exp Mol Med 2002, 34: 224\u201332.","journal-title":"Exp Mol Med"},{"key":"169_CR13","doi-asserted-by":"publisher","first-page":"10","DOI":"10.1186\/1471-2105-4-10","volume":"4","author":"K Strimmer","year":"2003","unstructured":"Strimmer K: Modeling gene expression measurement error: a quasi-likelihood approach.\n                           BMC Bioinformatics 2003, 4: 10. 10.1186\/1471-2105-4-10","journal-title":"BMC Bioinformatics"},{"key":"169_CR14","doi-asserted-by":"publisher","first-page":"966","DOI":"10.1093\/bioinformatics\/btg107","volume":"19","author":"DM Rocke","year":"2003","unstructured":"Rocke DM, Durbin B: Approximate variance-stabilizing transformations for gene-expression microarray data.\n                           Bioinformatics 2003, 19: 966\u201372. 10.1093\/bioinformatics\/btg107","journal-title":"Bioinformatics"},{"issue":"Suppl 1","key":"169_CR15","doi-asserted-by":"publisher","first-page":"S105","DOI":"10.1093\/bioinformatics\/18.suppl_1.S105","volume":"18","author":"BP Durbin","year":"2002","unstructured":"Durbin BP, Hardin JS, Hawkins DM, Rocke DM: A variance-stabilizing transformation for gene-expression microarray data.\n                           Bioinformatics 2002, 18(Suppl 1):S105\u201310.","journal-title":"Bioinformatics"},{"issue":"Suppl 1","key":"169_CR16","doi-asserted-by":"publisher","first-page":"S96","DOI":"10.1093\/bioinformatics\/18.suppl_1.S96","volume":"18","author":"W Huber","year":"2002","unstructured":"Huber W, Von Heydebreck A, Sultmann H, Poustka A, Vingron M: Variance stabilization applied to microarray data calibration and to the quantification of differential expression.\n                           Bioinformatics 2002, 18(Suppl 1):S96\u2013104.","journal-title":"Bioinformatics"}],"container-title":["BMC Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1186\/1471-2105-5-53.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,9,13]],"date-time":"2024-09-13T16:02:28Z","timestamp":1726243348000},"score":1,"resource":{"primary":{"URL":"https:\/\/bmcbioinformatics.biomedcentral.com\/articles\/10.1186\/1471-2105-5-53"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2004,5,5]]},"references-count":16,"journal-issue":{"issue":"1","published-online":{"date-parts":[[2004,12]]}},"alternative-id":["169"],"URL":"https:\/\/doi.org\/10.1186\/1471-2105-5-53","relation":{},"ISSN":["1471-2105"],"issn-type":[{"type":"electronic","value":"1471-2105"}],"subject":[],"published":{"date-parts":[[2004,5,5]]},"assertion":[{"value":"13 December 2003","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"5 May 2004","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"5 May 2004","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}}],"article-number":"53"}}