{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,10,29]],"date-time":"2025-10-29T19:09:15Z","timestamp":1761764955295},"reference-count":7,"publisher":"Springer Science and Business Media LLC","issue":"1","content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["BMC Bioinformatics"],"published-print":{"date-parts":[[2007,12]]},"abstract":"<jats:title>Abstract<\/jats:title>\n          <jats:sec>\n            <jats:title>Background<\/jats:title>\n            <jats:p>Apollo, a genome annotation viewer and editor, has become a widely used genome annotation and visualization tool for distributed genome annotation projects. When using Apollo for annotation, database updates are carried out by uploading intermediate annotation files into the respective database. This non-direct database upload is laborious and evokes problems of data synchronicity.<\/jats:p>\n          <\/jats:sec>\n          <jats:sec>\n            <jats:title>Results<\/jats:title>\n            <jats:p>To overcome these limitations we extended the Apollo data adapter with a generic, configurable web service client that is able to retrieve annotation data in a GAME-XML-formatted string and pass it on to Apollo's internal input routine.<\/jats:p>\n          <\/jats:sec>\n          <jats:sec>\n            <jats:title>Conclusion<\/jats:title>\n            <jats:p>This Apollo web service adapter, Apollo2Go, simplifies the data exchange in distributed projects and aims to render the annotation process more comfortable.<\/jats:p>\n            <jats:p>The Apollo2Go software is freely available from <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"ftp:\/\/ftpmips.gsf.de\/plants\/apollo_webservice\" ext-link-type=\"uri\">ftp:\/\/ftpmips.gsf.de\/plants\/apollo_webservice<\/jats:ext-link>.<\/jats:p>\n          <\/jats:sec>","DOI":"10.1186\/1471-2105-8-320","type":"journal-article","created":{"date-parts":[[2007,8,30]],"date-time":"2007-08-30T18:14:15Z","timestamp":1188497655000},"update-policy":"http:\/\/dx.doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":4,"title":["Apollo2Go: a web service adapter for the Apollo genome viewer to enable distributed genome annotation"],"prefix":"10.1186","volume":"8","author":[{"given":"Kathrin","family":"Klee","sequence":"first","affiliation":[]},{"given":"Rebecca","family":"Ernst","sequence":"additional","affiliation":[]},{"given":"Manuel","family":"Spannagl","sequence":"additional","affiliation":[]},{"given":"Klaus FX","family":"Mayer","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2007,8,30]]},"reference":[{"issue":"Database issue","key":"1692_CR1","doi-asserted-by":"publisher","first-page":"D741","DOI":"10.1093\/nar\/gkj094","volume":"34","author":"H Ohyanagi","year":"2006","unstructured":"Ohyanagi H, Tanaka T, Sakai H, Shigemoto Y, Yamaguchi K, Habara T, Fujii Y, Antonio BA, Nagamura Y, Imanishi T, Ikeo K, Itoh T, Gojobori T, Sasaki T: The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information. Nucleic Acids Res 2006, 34(Database issue):D741\u20134. 10.1093\/nar\/gkj094","journal-title":"Nucleic Acids Res"},{"issue":"5461","key":"1692_CR2","doi-asserted-by":"publisher","first-page":"2182","DOI":"10.1126\/science.287.5461.2182","volume":"287","author":"E Pennisi","year":"2000","unstructured":"Pennisi E: Ideas fly at gene-finding jamboree. 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Nature 2001, 409(6822):860\u2013921. 10.1038\/35057062","journal-title":"Nature"},{"key":"1692_CR4","doi-asserted-by":"publisher","first-page":"7","DOI":"10.1186\/1471-2105-2-7","volume":"2","author":"RD Dowell","year":"2001","unstructured":"Dowell RD, Jokerst RM, Day A, Eddy SR, Stein L: The distributed annotation system. BMC Bioinformatics 2001, 2: 7. 10.1186\/1471-2105-2-7","journal-title":"BMC Bioinformatics"},{"issue":"12","key":"1692_CR5","doi-asserted-by":"publisher","first-page":"RESEARCH0082","DOI":"10.1186\/gb-2002-3-12-research0082","volume":"3","author":"SE Lewis","year":"2002","unstructured":"Lewis SE, Searle SM, Harris N, Gibson M, Lyer V, Richter J, Wiel C, Bayraktaroglir L, Birney E, Crosby MA, Kaminker JS, Matthews BB, Prochnik SE, Smithy CD, Tupy JL, Rubin GM, Misra S, Mungall CJ, Clamp ME: Apollo: a sequence annotation editor. 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