{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,3,13]],"date-time":"2024-03-13T17:11:54Z","timestamp":1710349914054},"reference-count":19,"publisher":"Springer Science and Business Media LLC","issue":"S2","license":[{"start":{"date-parts":[[2008,3,1]],"date-time":"2008-03-01T00:00:00Z","timestamp":1204329600000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/2.0"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["BMC Bioinformatics"],"published-print":{"date-parts":[[2008,3]]},"DOI":"10.1186\/1471-2105-9-s2-s13","type":"journal-article","created":{"date-parts":[[2008,3,26]],"date-time":"2008-03-26T19:14:51Z","timestamp":1206558891000},"source":"Crossref","is-referenced-by-count":14,"title":["SNPLims: a data management system for genome wide association studies"],"prefix":"10.1186","volume":"9","author":[{"given":"Alessandro","family":"Orro","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Guia","family":"Guffanti","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Erika","family":"Salvi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Fabio","family":"Macciardi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Luciano","family":"Milanesi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2008,3,26]]},"reference":[{"key":"2580_CR1","doi-asserted-by":"publisher","first-page":"1304","DOI":"10.1101\/gr.159701","volume":"11","author":"JL Li","year":"2001","unstructured":"Li JL, Deng H, Lai DB, Xu F, Chen J, Gao G, Recker RR, Deng HW: Toward high-throughput genotyping: dynamic and automatic software for manipulating large-scale genotype data using fluorescently labeled dinucleotide markers. Genome Res 2001, 11: 1304\u20131314. 10.1101\/gr.159701","journal-title":"Genome Res"},{"key":"2580_CR2","doi-asserted-by":"publisher","first-page":"94","DOI":"10.1186\/1471-2105-6-94","volume":"6","author":"N Donofrio","year":"2005","unstructured":"Donofrio N, Rajagopalan R, Brown D, Diener S, Windham D, Nolin S, Floyd A, Mitchell T, Galadima N, Tucker S, Orbach MJ, Patel G, Farman M, Pampanwar V, Soderlund C, Lee YH, Dean RA: PACLIMS: A component LIM system for high throughput functional genomic analysis. BMC Bioinformatics 2005, 6: 94. 10.1186\/1471-2105-6-94","journal-title":"BMC Bioinformatics"},{"key":"2580_CR3","doi-asserted-by":"publisher","first-page":"266","DOI":"10.1093\/bioinformatics\/bth486","volume":"21","author":"LJ Zhao","year":"2005","unstructured":"Zhao LJ, Li MX, Guo YF, Xu FH, Li JL, Deng HW: SNPP: automating large-scale SNP genotype data management. Bioinformatics 2005, 21: 266\u2013268. 10.1093\/bioinformatics\/bth486","journal-title":"Bioinformatics"},{"key":"2580_CR4","doi-asserted-by":"publisher","first-page":"246","DOI":"10.1186\/1471-2105-6-246","volume":"6","author":"S Monnier","year":"2005","unstructured":"Monnier S, Cox DG, Albion T, Canzian F: T.I.M.S: Taqman Information Management System, tools to organize data flow in a genotyping laboratory. BMC Bioinformatics 2005, 6: 246. 10.1186\/1471-2105-6-246","journal-title":"BMC Bioinformatics"},{"key":"2580_CR5","doi-asserted-by":"publisher","first-page":"654","DOI":"10.1093\/bioinformatics\/17.7.654","volume":"17","author":"J Hampe","year":"2001","unstructured":"Hampe J, Wollstein A, Lu T, Frevel HJ, Will M, Manaster C, Schreiber S: An integrated system for high throughput TaqMan\u2122 based SNP genotyping. Bioinformatics 2001, 17: 654\u2013655. 10.1093\/bioinformatics\/17.7.654","journal-title":"Bioinformatics"},{"key":"2580_CR6","doi-asserted-by":"publisher","first-page":"60","DOI":"10.1186\/1471-2105-6-60","volume":"6","author":"L Wang","year":"2005","unstructured":"Wang L, Liu S, Niu T, Xu X: SNPHunter: a bioinformatic software for single nucleotide polymorphism data acquisition and management. BMC Bioinformatics 2005, 6: 60. 10.1186\/1471-2105-6-60","journal-title":"BMC Bioinformatics"},{"key":"2580_CR7","unstructured":"Illumina[\n                    http:\/\/www.illumina.com\n                    \n                  ]"},{"key":"2580_CR8","unstructured":"Debian[\n                    http:\/\/www.debian.org\n                    \n                  ]"},{"key":"2580_CR9","unstructured":"PostgreSQL[\n                    http:\/\/www.postgresql.org\n                    \n                  ]"},{"key":"2580_CR10","unstructured":"Zope[\n                    http:\/\/www.zope.org\n                    \n                  ]"},{"key":"2580_CR11","unstructured":"plink \u2013 \u201cWhole genome association analysis toolset\u201d[\n                    http:\/\/pngu.mgh.harvard.edu\/~purcell\/plink\n                    \n                  ]"},{"key":"2580_CR12","unstructured":"Plone[\n                    http:\/\/www.plone.org\n                    \n                  ]"},{"key":"2580_CR13","doi-asserted-by":"publisher","first-page":"904","DOI":"10.1038\/ng1847","volume":"38","author":"AL Price","year":"2006","unstructured":"Price AL, Patterson NJ, Plenge RM, Weinblatt ME, Shadick NA, Reich D: Principal components analysis corrects for stratification in genome-wide association studies. Nature Genetics 2006, 38: 904\u2013909. 10.1038\/ng1847","journal-title":"Nature Genetics"},{"key":"2580_CR14","doi-asserted-by":"publisher","first-page":"170","DOI":"10.1086\/302959","volume":"67","author":"JK Pritchard","year":"2000","unstructured":"Pritchard JK, Stephens M, Rosenberg NA, Donnelly P: Association mapping in structured populations. American Journal of Human Genetics 2000, 67: 170\u2013181. 10.1086\/302959","journal-title":"American Journal of Human Genetics"},{"key":"2580_CR15","doi-asserted-by":"publisher","first-page":"301","DOI":"10.1038\/sj.ejhg.5200625","volume":"9","author":"S Horvath","year":"2001","unstructured":"Horvath S, Xu X, Laird N: The family based association test method: strategies for studying general genotype-phenotype associations. Euro J Hum Gen 2001, 9: 301\u2013306. 10.1038\/sj.ejhg.5200625","journal-title":"Euro J Hum Gen"},{"key":"2580_CR16","unstructured":"WGAViewer[\n                    http:\/\/www.genome.duke.edu\/centers\/pg2\/downloads\/wgaviewer.php\n                    \n                  ]"},{"key":"2580_CR17","doi-asserted-by":"publisher","first-page":"263","DOI":"10.1093\/bioinformatics\/bth457","volume":"21","author":"JC Barrett","year":"2005","unstructured":"Barrett JC, Fry B, Maller J, Daly MJ: Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 2005, 21: 263\u2013265. 10.1093\/bioinformatics\/bth457","journal-title":"Bioinformatics"},{"key":"2580_CR18","doi-asserted-by":"publisher","first-page":"1162","DOI":"10.1086\/379378","volume":"73","author":"M Stephens","year":"2003","unstructured":"Stephens M, Donnelly P: A comparison of Bayesian methods for haplotype reconstruction from population genotype data. American Journal of Human Genetics 2003, 73: 1162\u20131169. 10.1086\/379378","journal-title":"American Journal of Human Genetics"},{"key":"2580_CR19","doi-asserted-by":"publisher","first-page":"2315","DOI":"10.1093\/bioinformatics\/bth224","volume":"20","author":"MB Lanktree","year":"2004","unstructured":"Lanktree MB, VanderBeek L, Macciardi FM, Kennedy JL: PedSplit: pedigree management for stratified analysis. Bioinformatics 2004, 20: 2315\u20132316. 10.1093\/bioinformatics\/bth224","journal-title":"Bioinformatics"}],"container-title":["BMC Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/1471-2105-9-S2-S13.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1186\/1471-2105-9-S2-S13\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/1471-2105-9-S2-S13.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,1,22]],"date-time":"2019-01-22T08:26:20Z","timestamp":1548145580000},"score":1,"resource":{"primary":{"URL":"https:\/\/bmcbioinformatics.biomedcentral.com\/articles\/10.1186\/1471-2105-9-S2-S13"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2008,3]]},"references-count":19,"journal-issue":{"issue":"S2","published-print":{"date-parts":[[2008,3]]}},"alternative-id":["2580"],"URL":"https:\/\/doi.org\/10.1186\/1471-2105-9-s2-s13","relation":{},"ISSN":["1471-2105"],"issn-type":[{"value":"1471-2105","type":"electronic"}],"subject":[],"published":{"date-parts":[[2008,3]]},"article-number":"S13"}}