{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2023,9,5]],"date-time":"2023-09-05T19:14:30Z","timestamp":1693941270005},"reference-count":24,"publisher":"Springer Science and Business Media LLC","issue":"S9","license":[{"start":{"date-parts":[[2008,8,1]],"date-time":"2008-08-01T00:00:00Z","timestamp":1217548800000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/2.0"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["BMC Bioinformatics"],"published-print":{"date-parts":[[2008,8]]},"DOI":"10.1186\/1471-2105-9-s9-s14","type":"journal-article","created":{"date-parts":[[2008,8,12]],"date-time":"2008-08-12T14:13:05Z","timestamp":1218550385000},"source":"Crossref","is-referenced-by-count":11,"title":["Time-dependent ARMA modeling of genomic sequences"],"prefix":"10.1186","volume":"9","author":[{"given":"Jerzy S","family":"Zielinski","sequence":"first","affiliation":[]},{"given":"Nidhal","family":"Bouaynaya","sequence":"additional","affiliation":[]},{"given":"Dan","family":"Schonfeld","sequence":"additional","affiliation":[]},{"given":"William","family":"O'Neill","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2008,8,12]]},"reference":[{"issue":"6365","key":"2673_CR1","doi-asserted-by":"publisher","first-page":"168","DOI":"10.1038\/356168a0","volume":"356","author":"CK Peng","year":"1992","unstructured":"Peng CK, Buldyrev SV, Goldberger AL, Havlin S, Sciortino F, Simons M, Stanley HE: Long-range correlations in nucleotide sequences. Nature. 1992, 356 (6365): 168-170.","journal-title":"Nature"},{"key":"2673_CR2","doi-asserted-by":"publisher","first-page":"5084","DOI":"10.1103\/PhysRevE.51.5084","volume":"51","author":"SV Buldyrev","year":"1995","unstructured":"Buldyrev SV, Goldberger AL, Havlin S, Mantegna RN, Matsa ME, Peng CK, Simons M, Stanley HE: Long-range correlation properties of coding and noncoding DNA sequences: GenBank analysis. Physical Review E. 1995, 51: 5084-5091.","journal-title":"Physical Review E"},{"key":"2673_CR3","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1016\/S0378-4371(99)00407-0","volume":"273","author":"HE Stanley","year":"1999","unstructured":"Stanley HE, Buldyrev SV, Goldberger AL, Havlin S, Peng CK, Simons M: Scaling features of noncoding DNA. Physica A. 1999, 273: 1-18.","journal-title":"Physica A"},{"key":"2673_CR4","doi-asserted-by":"publisher","first-page":"041910","DOI":"10.1103\/PhysRevE.71.041910","volume":"71","author":"W Li","year":"2005","unstructured":"Li W, Holste D: Universal 1\/f noise, crossovers of scaling exponents, and chromosome-specific patterns of guanine-cytosine content in DNA sequences of the human genome. Physical Review E. 2005, 71: 041910-","journal-title":"Physical Review E"},{"key":"2673_CR5","doi-asserted-by":"publisher","first-page":"497","DOI":"10.1016\/j.physa.2006.05.041","volume":"373","author":"B Podobnik","year":"2006","unstructured":"Podobnik B, Shao J, Dokholyan NV, Zlatic V, Stanley HE, Grosse I: Similarity and dissimilarity in correlations of genomic DNA. Physica A. 2006, 373: 497-502.","journal-title":"Physica A"},{"key":"2673_CR6","doi-asserted-by":"publisher","first-page":"032903","DOI":"10.1103\/PhysRevE.75.032903","volume":"75","author":"P Carpena","year":"2007","unstructured":"Carpena P, Bernaola-Galvan P, Coronado AV, Hackenberg M, Oliver JL: Identifying chracteristic scales in the human genome. Physical Review E. 2007, 75: 032903-","journal-title":"Physical Review E"},{"issue":"10","key":"2673_CR7","doi-asserted-by":"publisher","first-page":"5240","DOI":"10.1103\/PhysRevA.43.5240","volume":"43","author":"W Li","year":"1991","unstructured":"Li W: Expansion-modification systems: a model for spatial 1\/f spectra. Physical Review A. 1991, 43 (10): 5240-5260.","journal-title":"Physical Review A"},{"key":"2673_CR8","doi-asserted-by":"publisher","first-page":"341","DOI":"10.1006\/jtbi.1996.0225","volume":"183","author":"G Dodin","year":"1996","unstructured":"Dodin G, Levoir P, Cordier C: Triplet Correlation in DNA Sequences and Stability of Heteroduplexes. Journal of Theoretical Biology. 1996, 183: 341-343.","journal-title":"Journal of Theoretical Biology"},{"key":"2673_CR9","doi-asserted-by":"publisher","first-page":"3805","DOI":"10.1103\/PhysRevLett.68.3805","volume":"68","author":"RF Voss","year":"1992","unstructured":"Voss RF: Evolution of long-range fractal correlations and 1\/f noise in DNA base sequences. Physical Review Letters. 1992, 68: 3805-3808.","journal-title":"Physical Review Letters"},{"key":"2673_CR10","doi-asserted-by":"publisher","first-page":"655","DOI":"10.1209\/0295-5075\/17\/7\/014","volume":"17","author":"W Li","year":"1992","unstructured":"Li W, Kaneko K: Long-range correlation and partial 1\/f spectrum in a noncoding DNA sequence. Europhysics Letters. 1992, 17: 655-","journal-title":"Europhysics Letters"},{"key":"2673_CR11","first-page":"200","volume-title":"IEEE Statistical Signal Processing Workshop","author":"N Bouaynaya","year":"2007","unstructured":"Bouaynaya N, Schonfeld D: Non-Stationary Analysis of Genomic Sequences. IEEE Statistical Signal Processing Workshop. 2007, Madison, WI, 200-204."},{"key":"2673_CR12","volume-title":"IEEE Journal of Selected Topics in Signal Processing","author":"N Bouaynaya","year":"2008","unstructured":"Bouaynaya N, Schonfeld D: Non-stationary Analysis of Coding and Non-coding Regions in Nucleotide Sequences. IEEE Journal of Selected Topics in Signal Processing. 2008"},{"issue":"444","key":"2673_CR13","doi-asserted-by":"publisher","first-page":"1488","DOI":"10.1080\/01621459.1998.10473808","volume":"93","author":"S ADAK","year":"1998","unstructured":"ADAK S: Time-dependent spectral analysis of nonstationary time series. Journal of the American Statistical Association. 1998, 93 (444): 1488-1501.","journal-title":"Journal of the American Statistical Association"},{"key":"2673_CR14","volume-title":"Proceedings of the Berkeley Symppsium on Math, Statistics, and Probability","author":"H Cramer","year":"1961","unstructured":"Cramer H: On some classes of nonstationary stochastic processes. Proceedings of the Berkeley Symppsium on Math, Statistics, and Probability. 1961, Los Angeles, CA"},{"key":"2673_CR15","volume-title":"ASSP Workshop on Spectral Estimation","author":"Y Grenier","year":"1981","unstructured":"Grenier Y: Rational nonstationary spectra and their estimation. ASSP Workshop on Spectral Estimation. 1981"},{"issue":"8","key":"2673_CR16","doi-asserted-by":"publisher","first-page":"672","DOI":"10.1109\/TCS.1980.1084879","volume":"27","author":"NC Huang","year":"1980","unstructured":"Huang NC, Aggarwal JK: On linear Shift-variant digital filters. IEEE Transactions on Circuits and Systems. 1980, 27 (8): 672-679.","journal-title":"IEEE Transactions on Circuits and Systems"},{"key":"2673_CR17","first-page":"359","volume-title":"Nature","author":"VV Prabhu","year":"1992","unstructured":"Prabhu VV, Claverie JM: Correlations in intronless DNA. Nature. 1992, 359-782."},{"key":"2673_CR18","doi-asserted-by":"publisher","first-page":"212","DOI":"10.1038\/361212b0","volume":"361","author":"CA Chatzidimitriou-Dreismann","year":"1993","unstructured":"Chatzidimitriou-Dreismann CA, Larhammar D: Long-range correlations in DNA. Nature. 1993, 361: 212-","journal-title":"Nature"},{"issue":"26","key":"2673_CR19","doi-asserted-by":"publisher","first-page":"12972","DOI":"10.1073\/pnas.91.26.12972","volume":"91","author":"VS Pande","year":"1994","unstructured":"Pande VS, Grosberg AY, Tanaka T: Nonrandomness in protein sequences \u2013 evidence for a physically driven stage of evolution. Proceedings of the National Academy of Sciences. 1994, 91 (26): 12972-12975.","journal-title":"Proceedings of the National Academy of Sciences"},{"key":"2673_CR20","doi-asserted-by":"crossref","unstructured":"Guharay S, Hunt BR, York JA, White OR: Correlations in DNA sequences across the three domains of life. Physica D. 2000, 146 (1\u20134):","DOI":"10.1016\/S0167-2789(00)00153-6"},{"issue":"12","key":"2673_CR21","doi-asserted-by":"publisher","first-page":"8902","DOI":"10.1103\/PhysRevA.45.8902","volume":"45","author":"CL Berthelsen","year":"1992","unstructured":"Berthelsen CL, Glazier JA, Skolnick MH: Global fractal dimension of human DNA sequences treated as pseudorandom walks. Physical Review A. 1992, 45 (12): 8902-8913.","journal-title":"Physical Review A"},{"issue":"4","key":"2673_CR22","doi-asserted-by":"publisher","first-page":"899","DOI":"10.1109\/TASSP.1983.1164152","volume":"31","author":"Y Grenier","year":"1983","unstructured":"Grenier Y: Time-Dependent ARMA Modeling of Nonstationary Signals. IEEE Transactions on Acoustics, Speech, and Signal Processing. 1983, 31 (4): 899-911.","journal-title":"IEEE Transactions on Acoustics, Speech, and Signal Processing"},{"key":"2673_CR23","volume-title":"Statistical digital signal processing and modeling. Wiley","author":"MH Hayes","year":"1996","unstructured":"Hayes MH: Statistical digital signal processing and modeling. Wiley. 1996"},{"key":"2673_CR24","volume-title":"System Identification \u2013 Theory for the User","author":"L Ljung","year":"2006","unstructured":"Ljung L: System Identification \u2013 Theory for the User. 2006, Prentice Hall, second","edition":"second"}],"container-title":["BMC Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/1471-2105-9-S9-S14.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1186\/1471-2105-9-S9-S14\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/1471-2105-9-S9-S14.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2020,2,17]],"date-time":"2020-02-17T16:52:18Z","timestamp":1581958338000},"score":1,"resource":{"primary":{"URL":"https:\/\/bmcbioinformatics.biomedcentral.com\/articles\/10.1186\/1471-2105-9-S9-S14"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2008,8]]},"references-count":24,"journal-issue":{"issue":"S9","published-print":{"date-parts":[[2008,8]]}},"alternative-id":["2673"],"URL":"https:\/\/doi.org\/10.1186\/1471-2105-9-s9-s14","relation":{},"ISSN":["1471-2105"],"issn-type":[{"value":"1471-2105","type":"electronic"}],"subject":[],"published":{"date-parts":[[2008,8]]},"article-number":"S14"}}