{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2022,3,30]],"date-time":"2022-03-30T22:18:11Z","timestamp":1648678691420},"reference-count":27,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2011,10,11]],"date-time":"2011-10-11T00:00:00Z","timestamp":1318291200000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/2.0"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["J Bioinform Sys Biology"],"published-print":{"date-parts":[[2011,12]]},"DOI":"10.1186\/1687-4153-2011-6","type":"journal-article","created":{"date-parts":[[2011,10,12]],"date-time":"2011-10-12T06:17:14Z","timestamp":1318400234000},"source":"Crossref","is-referenced-by-count":1,"title":["Detecting controlling nodes of boolean regulatory networks"],"prefix":"10.1186","volume":"2011","author":[{"given":"Steffen","family":"Schober","sequence":"first","affiliation":[]},{"given":"David","family":"Kracht","sequence":"additional","affiliation":[]},{"given":"Reinhard","family":"Heckel","sequence":"additional","affiliation":[]},{"given":"Martin","family":"Bossert","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2011,10,11]]},"reference":[{"key":"5_CR1","first-page":"18","volume-title":"Proceedings of the Pacific Symposium on Biocomputing","author":"S Liang","year":"1998","unstructured":"Liang S, Fuhrman S, Somogyi Reveal R: A general reverse engineering algorithm for inference of genetic network architectures. Proceedings of the Pacific Symposium on Biocomputing 1998, 18-29."},{"key":"5_CR2","first-page":"17","volume-title":"Proceedings of the Pacific Symposium on Biocomputing","author":"T Akutsu","year":"1999","unstructured":"Akutsu T, Miyano S, Kuhara S: Identification of genetic networks from a small number of gene expression patterns under the boolean network model. Proceedings of the Pacific Symposium on Biocomputing 1999, 17-28."},{"issue":"8","key":"5_CR3","doi-asserted-by":"publisher","first-page":"727","DOI":"10.1093\/bioinformatics\/16.8.727","volume":"16","author":"T Akutsu","year":"2000","unstructured":"Akutsu T, Miyano S, Kuhara S: Inferring qualitative relations in genetic networks and metabolic pathways. Bioinformatics 2000,16(8):727-734. 10.1093\/bioinformatics\/16.8.727","journal-title":"Bioinformatics"},{"issue":"1-2","key":"5_CR4","doi-asserted-by":"publisher","first-page":"147","DOI":"10.1023\/A:1023905711304","volume":"52","author":"H L\u00e4hdesm\u00e4ki","year":"2003","unstructured":"L\u00e4hdesm\u00e4ki H, Shmulevich I, Yli-Harja O: On learning gene regulatory networks under the boolean network model. Mach Learn 2003,52(1-2):147-167.","journal-title":"Mach Learn"},{"issue":"11","key":"5_CR5","doi-asserted-by":"publisher","first-page":"1134","DOI":"10.1145\/1968.1972","volume":"27","author":"LG Valiant","year":"1984","unstructured":"Valiant LG: A theory of the learnable. Commun ACM 1984,27(11):1134-1142. 10.1145\/1968.1972","journal-title":"Commun ACM"},{"issue":"1","key":"5_CR6","doi-asserted-by":"publisher","first-page":"2","DOI":"10.1016\/j.tcs.2007.05.014","volume":"384","author":"J Arpe","year":"2007","unstructured":"Arpe J, Reischuk R: Learning juntas in the presence of noise. Theor Comput Sci 2007,384(1):2-21. 10.1016\/j.tcs.2007.05.014","journal-title":"Theor Comput Sci"},{"key":"5_CR7","first-page":"206","volume-title":"Proceedings of the ACM Symposium on Theory of Computing","author":"E Mossel","year":"2003","unstructured":"Mossel E, O'Donnell R, Servedio RP: Learning juntas. In Proceedings of the ACM Symposium on Theory of Computing. ACM, San Diego, CA, USA; 2003:206-212."},{"issue":"3","key":"5_CR8","doi-asserted-by":"publisher","first-page":"421","DOI":"10.1016\/j.jcss.2004.04.002","volume":"69","author":"E Mossel","year":"2004","unstructured":"Mossel E, O'Donnell R, Servedio RA: Learning functions of k relevant variables. J Comput Syst Sci 2004,69(3):421-434. 10.1016\/j.jcss.2004.04.002","journal-title":"J Comput Syst Sci"},{"issue":"6987","key":"5_CR9","doi-asserted-by":"publisher","first-page":"92","DOI":"10.1038\/nature02456","volume":"429","author":"MW Covert","year":"2004","unstructured":"Covert MW, Knight EM, Reed JL, Herrgard MJ, Palsson BO: Integrating high-throughput and computational data elucidates bacterial networks. Nature 2004,429(6987):92-96. 10.1038\/nature02456","journal-title":"Nature"},{"key":"5_CR10","volume-title":"Proceedings of International ITG Conference on Source and Channel Coding (SCC'10)","author":"S Schober","year":"2010","unstructured":"Schober S, Mir K, Bossert M: Reconstruction of boolean genetic regulatory networks consisting of canalyzing or low sensitivity functions. Proceedings of International ITG Conference on Source and Channel Coding (SCC'10) 2010."},{"key":"5_CR11","volume-title":"Proceedings of International Workshop on Computational Systems Biology","author":"S Schober","year":"2010","unstructured":"Schober S, Heckel R, Kracht D: Spectral properties of a boolean model of the E.Coli genetic network and their implications of network inference. In Proceedings of International Workshop on Computational Systems Biology. Luxembourg; 2010."},{"key":"5_CR12","first-page":"408","volume-title":"Proceedings of IEEE Symposium on Foundations of Computer Science","author":"M Ben-Or","year":"1985","unstructured":"Ben-Or M, Linial N: Collective coin flipping, robust voting schemes and minima of banzhaf values. Proceedings of IEEE Symposium on Foundations of Computer Science 1985, 408-416."},{"key":"5_CR13","first-page":"15","volume-title":"Dynamics of Random Boolean Networks","author":"JF Lynch","year":"2007","unstructured":"Lynch JF: Current Developments in Mathematics Biology: Proceedings of Conference on Mathematical Biology and Dynamical Systems. In Dynamics of Random Boolean Networks. Edited by: Culshaw R, Mahdavi K, Boucher J. World Scientific Publishing Co; 2007:15-38."},{"key":"5_CR14","first-page":"68","volume-title":"IEEE Proceedings of Symposium on Foundations of Computer Science","author":"J Kahn","year":"1988","unstructured":"Kahn J, Kalai G, Linial N: The influence of variables on boolean functions. IEEE Proceedings of Symposium on Foundations of Computer Science 1988, 68-80."},{"issue":"2","key":"5_CR15","doi-asserted-by":"publisher","first-page":"81","DOI":"10.1016\/j.biosystems.2005.09.009","volume":"84","author":"J Grefenstette","year":"2006","unstructured":"Grefenstette J, Kim So, Kauffman S: An analysis of the class of gene regulatory functions implied by a biochemical model. Biosystems 2006,84(2):81-90. 10.1016\/j.biosystems.2005.09.009","journal-title":"Biosystems"},{"issue":"49","key":"5_CR16","doi-asserted-by":"publisher","first-page":"17102","DOI":"10.1073\/pnas.0407783101","volume":"101","author":"SA Kauffman","year":"2004","unstructured":"Kauffman SA, Peterson C, Samuelsson B, Troein C: Genetic networks with canalyzing boolean rules are always stable. PNAS 2004,101(49):17102-17107. 10.1073\/pnas.0407783101","journal-title":"PNAS"},{"issue":"1","key":"5_CR17","doi-asserted-by":"publisher","first-page":"21","DOI":"10.1186\/1752-0509-2-21","volume":"2","author":"A Samal","year":"2008","unstructured":"Samal A, Jain S: The regulatory network of e. coli metabolism as a boolean dynamical system exhibits both homeostasis and flexibility of response. BMC Syst Biol 2008,2(1):21. 10.1186\/1752-0509-2-21","journal-title":"BMC Syst Biol"},{"issue":"14","key":"5_CR18","doi-asserted-by":"publisher","first-page":"4781","DOI":"10.1073\/pnas.0305937101","volume":"101","author":"F Li","year":"2004","unstructured":"Li F, Long T, Lu Y, Ouyang Q, Tang C: The yeast cell-cycle network is robustly designed. PNAS 2004,101(14):4781-4786. 10.1073\/pnas.0305937101","journal-title":"PNAS"},{"issue":"2","key":"5_CR19","doi-asserted-by":"publisher","first-page":"e1672","DOI":"10.1371\/journal.pone.0001672","volume":"3","author":"MI Davidich","year":"2008","unstructured":"Davidich MI, Bornholdt S: Boolean network model predicts cell cycle sequence of fission yeast. PLoS ONE 2008,3(2):e1672. 10.1371\/journal.pone.0001672","journal-title":"PLoS ONE"},{"key":"5_CR20","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1109\/TEC.1961.5219145","volume":"10","author":"R McNaughton","year":"1961","unstructured":"McNaughton R: Unate truth functions. IRE Trans Electron Comput 1961, 10: 1-6.","journal-title":"IRE Trans Electron Comput"},{"issue":"3","key":"5_CR21","doi-asserted-by":"publisher","first-page":"607","DOI":"10.1145\/174130.174138","volume":"40","author":"N Linial","year":"1993","unstructured":"Linial N, Mansour Y, Nisan N: Constant depth circuits, Fourier transform, and learnability. Journal ACM 1993,40(3):607-620. 10.1145\/174130.174138","journal-title":"Journal ACM"},{"issue":"2","key":"5_CR22","doi-asserted-by":"publisher","first-page":"277","DOI":"10.1016\/S0890-5401(03)00135-4","volume":"187","author":"NH Bshouty","year":"2003","unstructured":"Bshouty NH, Jackson JC, Tamon C: Uniform-distribution attribute noise learnability. Inf Comput 2003,187(2):277-290. 10.1016\/S0890-5401(03)00135-4","journal-title":"Inf Comput"},{"issue":"1","key":"5_CR23","doi-asserted-by":"publisher","first-page":"35","DOI":"10.1007\/BF01305949","volume":"14","author":"C Gotsman","year":"1994","unstructured":"Gotsman C, Linial N: Spectral properties of threshold functions. Combinatorica 1994,14(1):35-50. 10.1007\/BF01305949","journal-title":"Combinatorica"},{"issue":"5","key":"5_CR24","doi-asserted-by":"publisher","first-page":"776","DOI":"10.1109\/TIT.1984.1056949","volume":"30","author":"T Siegenthaler","year":"1984","unstructured":"Siegenthaler T: Correlation-immunity of nonlinear combining functions for cryptographic applications. IEEE Trans Inf Theory 1984,30(5):776-780. 10.1109\/TIT.1984.1056949","journal-title":"IEEE Trans Inf Theory"},{"issue":"3","key":"5_CR25","doi-asserted-by":"publisher","first-page":"569","DOI":"10.1109\/18.6037","volume":"34","author":"G-Z Xiao","year":"1988","unstructured":"Xiao G-Z, Massey JL: A spectral characterization of Correlation-Immune combining functions. IEEE Trans Inf Theory 1988,34(3):569-571. 10.1109\/18.6037","journal-title":"IEEE Trans Inf Theory"},{"key":"5_CR26","volume-title":"Art of Computer Programming, Volume 3: Sorting and Searching","author":"DE Knuth","year":"1998","unstructured":"Knuth DE: Art of Computer Programming, Volume 3: Sorting and Searching. 2nd edition. Addison-Wesley Professional, Reading, MA; 1998.","edition":"2"},{"issue":"2","key":"5_CR27","doi-asserted-by":"publisher","first-page":"262","DOI":"10.1109\/TCBB.2007.1067","volume":"5","author":"W Zhao","year":"2008","unstructured":"Zhao W, Serpedin E, Dougherty ER: Inferring connectivity of genetic regulatory networks using information-theoretic criteria. IEEE\/ACM Trans Comput Biol Bioinf 2008,5(2):262-274.","journal-title":"IEEE\/ACM Trans Comput Biol Bioinf"}],"container-title":["EURASIP Journal on Bioinformatics and Systems Biology"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/article\/10.1186\/1687-4153-2011-6\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/1687-4153-2011-6.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/1687-4153-2011-6.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,1,22]],"date-time":"2019-01-22T01:11:58Z","timestamp":1548119518000},"score":1,"resource":{"primary":{"URL":"https:\/\/bsb-eurasipjournals.springeropen.com\/articles\/10.1186\/1687-4153-2011-6"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2011,10,11]]},"references-count":27,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2011,12]]}},"alternative-id":["5"],"URL":"https:\/\/doi.org\/10.1186\/1687-4153-2011-6","relation":{},"ISSN":["1687-4153"],"issn-type":[{"value":"1687-4153","type":"electronic"}],"subject":[],"published":{"date-parts":[[2011,10,11]]},"article-number":"6"}}