{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,5,14]],"date-time":"2024-05-14T05:13:36Z","timestamp":1715663616355},"reference-count":23,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2013,1,1]],"date-time":"2013-01-01T00:00:00Z","timestamp":1356998400000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/2.0"}],"content-domain":{"domain":[],"crossmark-restriction":false},"short-container-title":["Algorithms Mol Biol"],"published-print":{"date-parts":[[2013,1]]},"DOI":"10.1186\/1748-7188-8-18","type":"journal-article","created":{"date-parts":[[2013,7,9]],"date-time":"2013-07-09T12:09:25Z","timestamp":1373371765000},"source":"Crossref","is-referenced-by-count":2,"title":["Extracting conflict-free information from multi-labeled trees"],"prefix":"10.1186","volume":"8","author":[{"given":"Akshay","family":"Deepak","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"David","family":"Fern\u00e1ndez-Baca","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Michelle M","family":"McMahon","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2013,7,9]]},"reference":[{"key":"191_CR1","doi-asserted-by":"publisher","first-page":"192","DOI":"10.1016\/S0196-6774(03)00081-6","volume":"49","author":"M Fellows","year":"2003","unstructured":"Fellows M, Hallett M, Stege U: Analogs & duals of the MAST problem for sequences & trees. J Algorithms. 2003, 49: 192-216. 10.1016\/S0196-6774(03)00081-6. [1998 European Symposium on Algorithms]","journal-title":"J Algorithms"},{"issue":"3","key":"191_CR2","doi-asserted-by":"publisher","first-page":"695","DOI":"10.1016\/j.ympev.2004.04.006","volume":"32","author":"H Grundt","year":"2004","unstructured":"Grundt H, Popp M, Brochmann C, Oxelman B: Polyploid origins in a circumpolar complex in Draba (Brassicaceae) inferred from cloned nuclear DNA sequences and fingerprints. Mol Phylogenet Evol. 2004, 32 (3): 695-710.","journal-title":"Mol Phylogenet Evol"},{"key":"191_CR3","doi-asserted-by":"publisher","first-page":"613","DOI":"10.1007\/s00285-005-0365-z","volume":"52","author":"K Huber","year":"2006","unstructured":"Huber K, Moulton V: Phylogenetic networks from multi-labelled trees. J Math Biol. 2006, 52: 613-632.","journal-title":"J Math Biol"},{"issue":"3","key":"191_CR4","doi-asserted-by":"publisher","first-page":"474","DOI":"10.1006\/mpev.2001.0977","volume":"20","author":"M Popp","year":"2001","unstructured":"Popp M, Oxelman B: Inferring the history of the Polyploid Silene aegaea (Caryophyllaceae) using Plastid and Homoeologous nuclear DNA sequences. Mol Phylogenet Evol. 2001, 20 (3): 474-481.","journal-title":"Mol Phylogenet Evol"},{"issue":"3","key":"191_CR5","doi-asserted-by":"publisher","first-page":"590","DOI":"10.1016\/j.ic.2010.11.022","volume":"209","author":"C Scornavacca","year":"2011","unstructured":"Scornavacca C, Berry V, Ranwez V: Building species trees from larger parts of phylogenomic databases. Inf Comput. 2011, 209 (3): 590-605. 10.1016\/j.ic.2010.11.022. [Special Issue: 3rd International Conference on Language and Automata Theory and Applications (LATA 2009)]","journal-title":"Inf Comput"},{"issue":"3","key":"191_CR6","doi-asserted-by":"publisher","first-page":"335","DOI":"10.1080\/10635150802158688","volume":"57","author":"M Sanderson","year":"2008","unstructured":"Sanderson M, Boss D, Chen D, Cranston K, Wehe A: The PhyLoTA Browser: processing GenBank for molecular phylogenetics research. Syst Biol. 2008, 57 (3): 335.","journal-title":"Syst Biol"},{"key":"191_CR7","doi-asserted-by":"publisher","first-page":"334","DOI":"10.1109\/TCBB.2006.57","volume":"3","author":"G Ganapathy","year":"2006","unstructured":"Ganapathy G, Goodson B, Jansen R, Le H, Ramachandran V, Warnow T: Pattern identification in biogeography. IEEE\/ACM Trans Comput Biol Bioinformatics. 2006, 3: 334-346.","journal-title":"IEEE\/ACM Trans Comput Biol Bioinformatics"},{"key":"191_CR8","doi-asserted-by":"publisher","first-page":"37","DOI":"10.1080\/10635150390132704","volume":"52","author":"K Johnson","year":"2003","unstructured":"Johnson K, Adams R, Page R, Clayton D: When do parasites fail to speciate in response to host speciation?. Syst Biol. 2003, 52: 37-47.","journal-title":"Syst Biol"},{"key":"191_CR9","doi-asserted-by":"publisher","first-page":"216","DOI":"10.1186\/1471-2148-9-216","volume":"9","author":"M Lott","year":"2009","unstructured":"Lott M, Spillner A, Huber K, Petri A, Oxelman B, Moulton V: Inferring polyploid phylogenies from multiply-labeled gene trees. BMC Evol Biol. 2009, 9: 216.","journal-title":"BMC Evol Biol"},{"key":"191_CR10","doi-asserted-by":"publisher","first-page":"755","DOI":"10.1101\/gr.123901.111","volume":"22","author":"M Rasmussen","year":"2012","unstructured":"Rasmussen M, Kellis M: Unified modeling of gene duplication, loss, and coalescence using a locus tree. Genome Res. 2012, 22: 755-765.","journal-title":"Genome Res"},{"key":"191_CR11","doi-asserted-by":"publisher","first-page":"91","DOI":"10.1007\/BF02618470","volume":"9","author":"M Steel","year":"1992","unstructured":"Steel M: The complexity of reconstructing trees from qualitative characters and subtrees. J Classif. 1992, 9: 91-116. 10.1007\/BF02618470.","journal-title":"J Classif"},{"issue":"18","key":"191_CR12","doi-asserted-by":"publisher","first-page":"i409\u2014i415","DOI":"10.1093\/bioinformatics\/bts386","volume":"28","author":"M Stolzer","year":"2012","unstructured":"Stolzer M, Lai H, Xu M, Sathaye D, Vernot B, Durand D: Inferring duplications, losses, transfers and incomplete lineage sorting with nonbinary species trees. Bioinformatics. 2012, 28 (18): i409\u2014i415.","journal-title":"Bioinformatics"},{"issue":"6","key":"191_CR13","doi-asserted-by":"publisher","first-page":"639","DOI":"10.1089\/cmb.2008.0088","volume":"15","author":"K Huber","year":"2008","unstructured":"Huber K, Lott M, Moulton V, Spillner A: The complexity of deriving multi-labeled trees from bipartitions. J Comput Biol. 2008, 15 (6): 639-651.","journal-title":"J Comput Biol"},{"key":"191_CR14","doi-asserted-by":"publisher","first-page":"34","DOI":"10.1016\/j.tree.2006.10.002","volume":"22","author":"A de Queiroz","year":"2007","unstructured":"de Queiroz A, Gatesy J: The supermatrix approach to systematics. Trends Ecol Evol. 2007, 22: 34-41.","journal-title":"Trends Ecol Evol"},{"issue":"4","key":"191_CR15","doi-asserted-by":"publisher","first-page":"548","DOI":"10.1093\/sysbio\/44.4.548","volume":"44","author":"JJ Wiens","year":"1995","unstructured":"Wiens JJ, Reeder TW: Combining data sets with different numbers of Taxa for Phylogenetic analysis. Syst Biol. 1995, 44 (4): 548-558.","journal-title":"Syst Biol"},{"key":"191_CR16","doi-asserted-by":"publisher","first-page":"3","DOI":"10.2307\/1222480","volume":"41","author":"BR Baum","year":"1992","unstructured":"Baum BR: Combining trees as a way of combining data sets for Phylogenetic inference, and the desirability of combining gene trees. Taxon. 1992, 41: 3-10. 10.2307\/1222480.","journal-title":"Taxon"},{"key":"191_CR17","doi-asserted-by":"publisher","first-page":"53","DOI":"10.1016\/1055-7903(92)90035-F","volume":"1","author":"M Ragan","year":"1992","unstructured":"Ragan M: Phylogenetic inference based on matrix representation of trees. Mol Phylogenet Evol. 1992, 1: 53-58.","journal-title":"Mol Phylogenet Evol"},{"key":"191_CR18","doi-asserted-by":"publisher","first-page":"18","DOI":"10.1186\/1748-7188-5-18","volume":"5","author":"M Bansal","year":"2010","unstructured":"Bansal M, Burleigh JG, Eulenstein O, Fern\u00e1ndez-Baca D: Robinson-foulds supertrees. Algorithms Mol Biol. 2010, 5: 18.","journal-title":"Algorithms Mol Biol"},{"issue":"2","key":"191_CR19","doi-asserted-by":"publisher","first-page":"214","DOI":"10.1093\/sysbio\/syr092","volume":"61","author":"M Swenson","year":"2012","unstructured":"Swenson M, Suri R, Linder C, Warnow T: SuperFine: fast and accurate supertree estimation. Syst Biol. 2012, 61 (2): 214-227.","journal-title":"Syst Biol"},{"issue":"12","key":"191_CR20","doi-asserted-by":"publisher","first-page":"1556","DOI":"10.1093\/bioinformatics\/btm135","volume":"23","author":"P Puigb\u00f2","year":"2007","unstructured":"Puigb\u00f2 P, Garcia-Vallv\u00e9 S, McInerney J: TOPD\/FMTS: a new software to compare phylogenetic trees. Bioinformatics. 2007, 23 (12): 1556.","journal-title":"Bioinformatics"},{"key":"191_CR21","doi-asserted-by":"publisher","first-page":"e66","DOI":"10.1093\/nar\/gkr087","volume":"39","author":"M Marcet-Houben","year":"2011","unstructured":"Marcet-Houben M, Gabald\u00f3n T: TreeKO: a duplication-aware algorithm for the comparison of phylogenetic trees. Nucleic Acids Res. 2011, 39: e66.","journal-title":"Nucleic Acids Res"},{"issue":"4","key":"191_CR22","doi-asserted-by":"publisher","first-page":"1029","DOI":"10.1109\/TCBB.2010.122","volume":"8","author":"K Huber","year":"2011","unstructured":"Huber K, Spillner A, Suchecki R, Moulton V: Metrics on multilabeled trees: interrelationships and diameter bounds. Comput Biol Bioinformatics, IEEE\/ACM Trans. 2011, 8 (4): 1029-1040.","journal-title":"Comput Biol Bioinformatics, IEEE\/ACM Trans"},{"key":"191_CR23","doi-asserted-by":"crossref","DOI":"10.1093\/oso\/9780198509424.001.0001","volume-title":"Phylogenetics","author":"C Semple","year":"2003","unstructured":"Semple C, Steel M: Phylogenetics. 2003, Oxford: Oxford University Press"}],"container-title":["Algorithms for Molecular Biology"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/1748-7188-8-18.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1186\/1748-7188-8-18\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/1748-7188-8-18.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,5,14]],"date-time":"2024-05-14T04:29:05Z","timestamp":1715660945000},"score":1,"resource":{"primary":{"URL":"https:\/\/almob.biomedcentral.com\/articles\/10.1186\/1748-7188-8-18"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2013,1]]},"references-count":23,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2013,1]]}},"alternative-id":["191"],"URL":"https:\/\/doi.org\/10.1186\/1748-7188-8-18","relation":{},"ISSN":["1748-7188"],"issn-type":[{"value":"1748-7188","type":"electronic"}],"subject":[],"published":{"date-parts":[[2013,1]]},"article-number":"18"}}