{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,1,29]],"date-time":"2026-01-29T23:36:36Z","timestamp":1769729796293,"version":"3.49.0"},"reference-count":15,"publisher":"Springer Science and Business Media LLC","issue":"1","content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Source Code Biol Med"],"published-print":{"date-parts":[[2014,12]]},"DOI":"10.1186\/1751-0473-9-11","type":"journal-article","created":{"date-parts":[[2014,6,6]],"date-time":"2014-06-06T21:03:22Z","timestamp":1402088602000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":57,"title":["Methylation plotter: a web tool for dynamic visualization of DNA methylation data"],"prefix":"10.1186","volume":"9","author":[{"given":"Izaskun","family":"Mallona","sequence":"first","affiliation":[]},{"given":"Anna","family":"D\u00edez-Villanueva","sequence":"additional","affiliation":[]},{"given":"Miguel A","family":"Peinado","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2014,6,7]]},"reference":[{"issue":"4","key":"112_CR1","doi-asserted-by":"publisher","first-page":"286","DOI":"10.1038\/nrg2005","volume":"8","author":"M Esteller","year":"2007","unstructured":"Esteller M:Cancer epigenomics: dna methylomes and histone-modification maps. Nat Rev Genet. 2007, 8 (4): 286-298. 10.1038\/nrg2005.","journal-title":"Nat Rev Genet"},{"issue":"4","key":"112_CR2","doi-asserted-by":"publisher","first-page":"683","DOI":"10.1016\/j.cell.2007.01.029","volume":"128","author":"PA Jones","year":"2007","unstructured":"Jones PA, Baylin SB:The epigenomics of cancer. Cell. 2007, 128 (4): 683-692. 10.1016\/j.cell.2007.01.029.","journal-title":"Cell"},{"issue":"6","key":"112_CR3","doi-asserted-by":"publisher","first-page":"465","DOI":"10.1038\/nrg2341","volume":"9","author":"MM Suzuki","year":"2008","unstructured":"Suzuki MM, Bird A:Dna methylation landscapes: provocative insights from epigenomics. Nat Rev Genet. 2008, 9 (6): 465-476. 10.1038\/nrg2341.","journal-title":"Nat Rev Genet"},{"issue":"1","key":"112_CR4","first-page":"84","volume":"693","author":"MA Peinado","year":"2010","unstructured":"Peinado MA, Jord\u00e0 M:Methods for dna methylation analysis and applications in colon cancer. Mutat Res Fund Mol Mech Mutagen. 2010, 693 (1): 84-93.","journal-title":"Mutat Res Fund Mol Mech Mutagen"},{"issue":"3","key":"112_CR5","doi-asserted-by":"publisher","first-page":"191","DOI":"10.1038\/nrg2732","volume":"11","author":"PW Laird","year":"2010","unstructured":"Laird PW:Principles and challenges of genome-wide dna methylation analysis. Nat Rev Genet. 2010, 11 (3): 191-203. 10.1038\/nrg2732.","journal-title":"Nat Rev Genet"},{"issue":"5964","key":"112_CR6","doi-asserted-by":"publisher","first-page":"415","DOI":"10.1126\/science.1179653","volume":"327","author":"JP Mesirov","year":"2010","unstructured":"Mesirov JP:Computer science. Accessible reproducible research. Science. 2010, 327 (5964): 415-416. 10.1126\/science.1179653.","journal-title":"Science"},{"issue":"5","key":"112_CR7","doi-asserted-by":"publisher","first-page":"1053","DOI":"10.1093\/nar\/28.5.1053","volume":"28","author":"C Grunau","year":"2000","unstructured":"Grunau C, Schattevoy R, Mache N, Rosenthal A:Methtools\u2014a toolbox to visualize and analyze dna methylation data. Nucleic Acids Res. 2000, 28 (5): 1053-1058. 10.1093\/nar\/28.5.1053.","journal-title":"Nucleic Acids Res"},{"issue":"5","key":"112_CR8","doi-asserted-by":"publisher","first-page":"656","DOI":"10.2144\/000112053","volume":"39","author":"Y Xu","year":"2005","unstructured":"Xu Y, Manoharan HT, Pitot HC:Cpg analyzer, a windows-based utility program for investigation of dna methylation. Biotechniques. 2005, 39 (5): 656-10.2144\/000112053.","journal-title":"Biotechniques"},{"key":"112_CR9","doi-asserted-by":"publisher","first-page":"334","DOI":"10.2144\/000112537","volume":"43","author":"Y-H Xu","year":"2007","unstructured":"Xu Y-H, Manoharan HT, Pitot HC:Cpg patternfinder: a windows\u00ae;-based utility program for easy and rapid identification of the cpg methylation status of dna. Biotechniques. 2007, 43: 334-342. 10.2144\/000112537.","journal-title":"Biotechniques"},{"issue":"1","key":"112_CR10","doi-asserted-by":"publisher","first-page":"270","DOI":"10.1093\/nar\/29.1.270","volume":"29","author":"C Grunau","year":"2001","unstructured":"Grunau C, Renault E, Rosenthal A, Roizes G:Methdb\u2014a public database for dna methylation data. Nucleic Acids Res. 2001, 29 (1): 270-274. 10.1093\/nar\/29.1.270.","journal-title":"Nucleic Acids Res"},{"issue":"21","key":"112_CR11","doi-asserted-by":"publisher","first-page":"4067","DOI":"10.1093\/bioinformatics\/bti652","volume":"21","author":"C Bock","year":"2005","unstructured":"Bock C, Reither S, Mikeska T, Paulsen M, Walter J, Lengauer T:Biq analyzer: visualization and quality control for dna methylation data from bisulfite sequencing. Bioinformatics. 2005, 21 (21): 4067-4068. 10.1093\/bioinformatics\/bti652.","journal-title":"Bioinformatics"},{"issue":"suppl 2","key":"112_CR12","doi-asserted-by":"publisher","first-page":"551","DOI":"10.1093\/nar\/gkr312","volume":"39","author":"P Lutsik","year":"2011","unstructured":"Lutsik P, Feuerbach L, Arand J, Lengauer T, Walter J, Bock C:Biq analyzer ht: locus-specific analysis of dna methylation by high-throughput bisulfite sequencing. Nucleic Acids Res. 2011, 39 (suppl 2): 551-556.","journal-title":"Nucleic Acids Res"},{"issue":"suppl 2","key":"112_CR13","doi-asserted-by":"publisher","first-page":"170","DOI":"10.1093\/nar\/gkn294","volume":"36","author":"Y Kumaki","year":"2008","unstructured":"Kumaki Y, Oda M, Okano M:Quma: quantification tool for methylation analysis. Nucleic Acids Res. 2008, 36 (suppl 2): 170-175.","journal-title":"Nucleic Acids Res"},{"key":"112_CR14","volume-title":"Shiny: Web Application Framework for R","author":"Inc. RStudio","year":"2013","unstructured":"RStudio Inc.:Shiny: Web Application Framework for R. 2013, R package version 0.8.0. [\n                    http:\/\/CRAN.R-project.org\/package=shiny\n                    \n                  ]."},{"issue":"3","key":"112_CR15","doi-asserted-by":"publisher","first-page":"383","DOI":"10.1101\/gr.4410706","volume":"16","author":"M Bibikova","year":"2006","unstructured":"Bibikova M, Lin Z, Zhou L, Chudin E, Garcia EW, Wu B, Doucet D, Thomas NJ, Wang Y, Vollmer E, Goldmann T, Seifart C, Jiang W, Barker DL, Chee MS, Floros J, Fan JB:High-throughput dna methylation profiling using universal bead arrays. Genome Res. 2006, 16 (3): 383-393. 10.1101\/gr.4410706.","journal-title":"Genome Res"}],"container-title":["Source Code for Biology and Medicine"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/1751-0473-9-11.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,1,21]],"date-time":"2019-01-21T20:35:29Z","timestamp":1548102929000},"score":1,"resource":{"primary":{"URL":"https:\/\/scfbm.biomedcentral.com\/articles\/10.1186\/1751-0473-9-11"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2014,6,7]]},"references-count":15,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2014,12]]}},"alternative-id":["112"],"URL":"https:\/\/doi.org\/10.1186\/1751-0473-9-11","relation":{},"ISSN":["1751-0473"],"issn-type":[{"value":"1751-0473","type":"electronic"}],"subject":[],"published":{"date-parts":[[2014,6,7]]},"assertion":[{"value":"27 March 2014","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"4 June 2014","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"7 June 2014","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}}],"article-number":"11"}}