{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,1]],"date-time":"2026-10-01T19:48:20Z","timestamp":1790884100895,"version":"4.1.0"},"reference-count":55,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2013,10,7]],"date-time":"2013-10-07T00:00:00Z","timestamp":1381104000000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/2.0"},{"start":{"date-parts":[[2013,10,7]],"date-time":"2013-10-07T00:00:00Z","timestamp":1381104000000},"content-version":"vor","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/2.0"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["J Biomed Semant"],"abstract":"<jats:title>Abstract<\/jats:title>\n                  <jats:sec>\n                    <jats:title>Background<\/jats:title>\n                    <jats:p>\n                      The Gene Ontology (GO) (\n                      <jats:ext-link xmlns:xlink=\"http:\/\/www.w3.org\/1999\/xlink\" xlink:href=\"http:\/\/www.geneontology.org\/\" ext-link-type=\"uri\">http:\/\/www.geneontology.org\/<\/jats:ext-link>\n                      ) contains a set of terms for describing the activity and actions of gene products across all kingdoms of life. Each of these activities is executed in a location within a cell or in the vicinity of a cell. In order to capture this context, the GO includes a sub-ontology called the Cellular Component (CC) ontology (GO-CCO). The primary use of this ontology is for GO annotation, but it has also been used for phenotype annotation, and for the annotation of images. Another ontology with similar scope to the GO-CCO is the Subcellular Anatomy Ontology (SAO), part of the Neuroscience Information Framework Standard (NIFSTD) suite of ontologies. The SAO also covers cell components, but in the domain of neuroscience.\n                    <\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Description<\/jats:title>\n                    <jats:p>Recently, the GO-CCO was enriched in content and links to the Biological Process and Molecular Function branches of GO as well as to other ontologies. This was achieved in several ways. We carried out an amalgamation of SAO terms with GO-CCO ones; as a result, nearly 100 new neuroscience-related terms were added to the GO. The GO-CCO also contains relationships to GO Biological Process and Molecular Function terms, as well as connecting to external ontologies such as the Cell Ontology (CL). Terms representing protein complexes in the Protein Ontology (PRO) reference GO-CCO terms for their species-generic counterparts. GO-CCO terms can also be used to search a variety of databases.<\/jats:p>\n                  <\/jats:sec>\n                  <jats:sec>\n                    <jats:title>Conclusions<\/jats:title>\n                    <jats:p>In this publication we provide an overview of the GO-CCO, its overall design, and some recent extensions that make use of additional spatial information. One of the most recent developments of the GO-CCO was the merging in of the SAO, resulting in a single unified ontology designed to serve the needs of GO annotators as well as the specific needs of the neuroscience community.<\/jats:p>\n                  <\/jats:sec>","DOI":"10.1186\/2041-1480-4-20","type":"journal-article","created":{"date-parts":[[2013,10,7]],"date-time":"2013-10-07T01:01:17Z","timestamp":1381107677000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":58,"title":["The Gene Ontology (GO) Cellular Component Ontology: integration with SAO (Subcellular Anatomy Ontology) and other recent developments"],"prefix":"10.1186","volume":"4","author":[{"given":"Paola","family":"Roncaglia","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Maryann E","family":"Martone","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"David P","family":"Hill","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Tanya Z","family":"Berardini","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Rebecca E","family":"Foulger","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Fahim T","family":"Imam","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Harold","family":"Drabkin","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Christopher J","family":"Mungall","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Jane","family":"Lomax","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2013,10,7]]},"reference":[{"key":"136_CR1","unstructured":"The Gene Ontology.http:\/\/www.geneontology.org\/,"},{"key":"136_CR2","doi-asserted-by":"publisher","first-page":"25","DOI":"10.1038\/75556","volume":"25","author":"M Ashburner","year":"2000","unstructured":"Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, Harris MA, Hill DP, Issel-Tarver L, Kasarskis A, Lewis S, Matese JC, Richardson JE, Ringwald M, Rubin GM, Sherlock G: Gene ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet. 2000, 25: 25-29. 10.1038\/75556.","journal-title":"Nat Genet"},{"key":"136_CR3","doi-asserted-by":"publisher","first-page":"3","DOI":"10.3389\/neuro.11.003.2007","volume":"1","author":"SD Larson","year":"2007","unstructured":"Larson SD, Fong LL, Gupta A, Condit C, Bug WJ, Martone ME: A formal ontology of subcellular neuroanatomy. Front Neuroinformatics. 2007, 1: 3-","journal-title":"Front Neuroinformatics"},{"key":"136_CR4","doi-asserted-by":"publisher","first-page":"205","DOI":"10.1007\/s12021-008-9033-y","volume":"6","author":"A Gupta","year":"2008","unstructured":"Gupta A, Bug W, Marenco L, Qian X, Condit C, Rangarajan A, M\u00fcller HM, Miller PL, Sanders B, Grethe JS, Astakhov V, Shepherd G, Sternberg PW, Martone ME: Federated access to heterogeneous information resources in the Neuroscience Information Framework (NIF). Neuroinformatics. 2008, 6: 205-217. 10.1007\/s12021-008-9033-y.","journal-title":"Neuroinformatics"},{"key":"136_CR5","unstructured":"Foundational Model of Anatomy ontology - Home.http:\/\/sig.biostr.washington.edu\/projects\/fm\/index.html,"},{"key":"136_CR6","doi-asserted-by":"publisher","first-page":"220","DOI":"10.1016\/j.jsb.2007.10.003","volume":"161","author":"ME Martone","year":"2008","unstructured":"Martone ME, Tran J, Wong WW, Sargis J, Fong L, Larson S, Lamont SP, Gupta A, Ellisman MH: The cell centered database project: an update on building community resources for managing and sharing 3D imaging data. J Struct Biol. 2008, 161: 220-231. 10.1016\/j.jsb.2007.10.003.","journal-title":"J Struct Biol"},{"key":"136_CR7","doi-asserted-by":"publisher","first-page":"7","DOI":"10.3389\/fninf.2013.00007","volume":"7","author":"SM Maynard","year":"2013","unstructured":"Maynard SM, Mungall CJ, Lewis SE, Imam FT, Martone ME: A knowledge based approach to matching human neurodegenerative disease and animal models. Front Neuroinformatics. 2013, 7: 7-","journal-title":"Front Neuroinformatics"},{"key":"136_CR8","doi-asserted-by":"publisher","first-page":"111","DOI":"10.3389\/fgene.2012.00111","volume":"3","author":"FT Imam","year":"2012","unstructured":"Imam FT, Larson SD, Bandrowski A, Grethe JS, Gupta A, Martone ME:Development and use of ontologies inside the neuroscience information framework: a practical approach.Front Genet. 2012, 3: 111-","journal-title":"Front Genet"},{"key":"136_CR9","doi-asserted-by":"publisher","first-page":"R46","DOI":"10.1186\/gb-2005-6-5-r46","volume":"6","author":"B Smith","year":"2005","unstructured":"Smith B, Ceusters W, Klagges B, K\u00f6hler J, Kumar A, Lomax J, Mungall C, Neuhaus F, Rector AL, Rosse C: Relations in biomedical ontologies. Genome Biol. 2005, 6: R46-10.1186\/gb-2005-6-5-r46.","journal-title":"Genome Biol"},{"key":"136_CR10","doi-asserted-by":"publisher","first-page":"R21","DOI":"10.1186\/gb-2005-6-2-r21","volume":"6","author":"J Bard","year":"2005","unstructured":"Bard J, Rhee SY, Ashburner M: An ontology for cell types. Genome Biol. 2005, 6: R21-10.1186\/gb-2005-6-2-r21.","journal-title":"Genome Biol"},{"key":"136_CR11","doi-asserted-by":"publisher","first-page":"e1","DOI":"10.1093\/pcp\/pcs163","volume":"54","author":"L Cooper","year":"2013","unstructured":"Cooper L, Walls RL, Elser J, Gandolfo MA, Stevenson DW, Smith B, Preece J, Athreya B, Mungall CJ, Rensing S, Hiss M, Lang D, Reski R, Berardini TZ, Li D, Huala E, Schaeffer M, Menda N, Arnaud E, Shrestha R, Yamazaki Y, Jaiswal P: The plant ontology as a tool for comparative plant anatomy and genomic analyses. Plant Cell Physiol. 2013, 54: e1-10.1093\/pcp\/pcs163.","journal-title":"Plant Cell Physiol"},{"key":"136_CR12","unstructured":"Zebrafish Anatomy Ontology.http:\/\/zfin.org\/action\/ontology\/show-all-anatomy-terms,"},{"key":"136_CR13","doi-asserted-by":"publisher","first-page":"R29","DOI":"10.1186\/gb-2005-6-3-r29","volume":"6","author":"TF Hayamizu","year":"2005","unstructured":"Hayamizu TF, Mangan M, Corradi JP, Kadin JA, Ringwald M: The adult mouse anatomical dictionary: a tool for annotating and integrating data. Genome Biol. 2005, 6: R29-10.1186\/gb-2005-6-3-r29.","journal-title":"Genome Biol"},{"key":"136_CR14","doi-asserted-by":"publisher","first-page":"R5","DOI":"10.1186\/gb-2012-13-1-r5","volume":"13","author":"CJ Mungall","year":"2012","unstructured":"Mungall CJ, Torniai C, Gkoutos GV, Lewis SE, Haendel MA: Uberon, an integrative multi-species anatomy ontology. Genome Biol. 2012, 13: R5-10.1186\/gb-2012-13-1-r5.","journal-title":"Genome Biol"},{"key":"136_CR15","doi-asserted-by":"publisher","first-page":"175","DOI":"10.1007\/s12021-008-9032-z","volume":"6","author":"WJ Bug","year":"2008","unstructured":"Bug WJ, Ascoli GA, Grethe JS, Gupta A, Fennema-Notestine C, Laird AR, Larson SD, Rubin D, Shepherd GM, Turner JA, Martone ME: The NIFSTD and BIRNLex vocabularies: building comprehensive ontologies for neuroscience. Neuroinformatics. 2008, 6: 175-194. 10.1007\/s12021-008-9032-z.","journal-title":"Neuroinformatics"},{"key":"136_CR16","unstructured":"Neuroscience Information Framework.http:\/\/neuinfo.org\/,"},{"key":"136_CR17","doi-asserted-by":"publisher","first-page":"D331","DOI":"10.1093\/nar\/gkp1018","volume":"38","author":"Gene Ontology Consortium","year":"2010","unstructured":"Gene Ontology Consortium: The Gene Ontology in 2010: extensions and refinements. Nucleic Acids Res. 2010, 38: D331-D335.","journal-title":"Nucleic Acids Res"},{"key":"136_CR18","unstructured":"GO-Cell Ontology cross-products file.http:\/\/purl.obolibrary.org\/obo\/go\/extensions\/x-cell-parts.owl,"},{"key":"136_CR19","doi-asserted-by":"publisher","first-page":"6","DOI":"10.1186\/1471-2105-12-6","volume":"12","author":"TF Meehan","year":"2011","unstructured":"Meehan TF, Masci AM, Abdulla A, Cowell LG, Blake JA, Mungall CJ, Diehl AD: Logical development of the cell ontology. BMC Bioinformatics. 2011, 12: 6-10.1186\/1471-2105-12-6.","journal-title":"BMC Bioinformatics"},{"key":"136_CR20","unstructured":"Cell Ontology OWL.http:\/\/purl.obolibrary.org\/obo\/cl.owl,"},{"issue":"1","key":"136_CR21","doi-asserted-by":"publisher","first-page":"80","DOI":"10.1016\/j.jbi.2010.02.002","volume":"44","author":"CJ Mungall","year":"2011","unstructured":"Mungall CJ, Bada M, Berardini TZ, Deegan J, Ireland A, Harris MA, Hill DP, Lomax J: Cross-product extensions of the gene ontology. J Biomed Inform. 2011, 44 (1): 80-86. 10.1016\/j.jbi.2010.02.002.","journal-title":"J Biomed Inform"},{"key":"136_CR22","unstructured":"GO extended version, go-plus.owl.http:\/\/purl.obolibrary.org\/obo\/go\/extensions\/go-plus.owl,"},{"key":"136_CR23","doi-asserted-by":"publisher","first-page":"D539","DOI":"10.1093\/nar\/gkq907","volume":"39","author":"DA Natale","year":"2011","unstructured":"Natale DA, Arighi CN, Barker WC, Blake JA, Bult CJ, Caudy M, Drabkin HJ, D\u2019Eustachio P, Evsikov AV, Huang H, Nchoutmboube J, Roberts NV, Smith B, Zhang J, Wu CH: The protein ontology: a structured representation of protein forms and complexes. Nucleic Acids Res. 2011, 39: D539-D545. 10.1093\/nar\/gkq907.","journal-title":"Nucleic Acids Res"},{"key":"136_CR24","doi-asserted-by":"publisher","first-page":"371","DOI":"10.1186\/1471-2105-12-371","volume":"12","author":"CJ Bult","year":"2011","unstructured":"Bult CJ, Drabkin HJ, Evsikov A, Natale D, Arighi C, Roberts N, Ruttenberg A, D\u2019Eustachio P, Smith B, Blake JA, Wu C: The representation of protein complexes in the Protein Ontology (PRO). BMC Bioinformatics. 2011, 12: 371-10.1186\/1471-2105-12-371.","journal-title":"BMC Bioinformatics"},{"key":"136_CR25","unstructured":"PR:000026828 report.http:\/\/purl.obolibrary.org\/obo\/PR_000026828,"},{"key":"136_CR26","doi-asserted-by":"publisher","first-page":"D841","DOI":"10.1093\/nar\/gkr1088","volume":"40","author":"S Kerrien","year":"2012","unstructured":"Kerrien S, Aranda B, Breuza L, Bridge A, Broackes-Carter F, Chen C, Duesbury M, Dumousseau M, Feuermann M, Hinz U, Jandrasits C, Jimenez RC, Khadake J, Mahadevan U, Masson P, Pedruzzi I, Pfeiffenberger E, Porras P, Raghunath A, Roechert B, Orchard S, Hermjakob H: The IntAct molecular interaction database in 2012. Nucleic Acids Res. 2012, 40: D841-D846. 10.1093\/nar\/gkr1088.","journal-title":"Nucleic Acids Res"},{"key":"136_CR27","unstructured":"AmiGO 2.http:\/\/amigo2.berkeleybop.org\/cgi-bin\/amigo2\/amigo,"},{"key":"136_CR28","doi-asserted-by":"publisher","first-page":"288","DOI":"10.1093\/bioinformatics\/btn615","volume":"25","author":"S Carbon","year":"2009","unstructured":"Carbon S, Ireland A, Mungall CJ, Shu S, Marshall B, Lewis S, AmiGO H: Web presence working group: AmiGO: online access to ontology and annotation data. Bioinforma Oxf Eng. 2009, 25: 288-289.","journal-title":"Bioinforma Oxf Eng"},{"key":"136_CR29","doi-asserted-by":"publisher","first-page":"3045","DOI":"10.1093\/bioinformatics\/btp536","volume":"25","author":"D Binns","year":"2009","unstructured":"Binns D, Dimmer E, Huntley R, Barrell D, O\u2019Donovan C, Apweiler R: QuickGO: a web-based tool for Gene Ontology searching. Bioinforma Oxf Engl. 2009, 25: 3045-3046. 10.1093\/bioinformatics\/btp536.","journal-title":"Bioinforma Oxf Engl"},{"key":"136_CR30","unstructured":"QuickGO.http:\/\/www.ebi.ac.uk\/QuickGO\/,"},{"key":"136_CR31","first-page":"bar068","volume":"2012","author":"S Burge","year":"2012","unstructured":"Burge S, Kelly E, Lonsdale D, Mutowo-Muellenet P, McAnulla C, Mitchell A, Sangrador-Vegas A, Yong S-Y, Mulder N, Hunter S: Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Database J Biol Databases Curation. 2012, 2012: bar068-","journal-title":"Database J Biol Databases Curation"},{"key":"136_CR32","unstructured":"UniProtKB Keywords.http:\/\/www.uniprot.org\/keywords\/,"},{"key":"136_CR33","doi-asserted-by":"publisher","first-page":"948","DOI":"10.1016\/j.bbrc.2006.04.008","volume":"344","author":"R Iida","year":"2006","unstructured":"Iida R, Yasuda T, Tsubota E, Takatsuka H, Matsuki T, Kishi K: Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes. Biochem Biophys Res Commun. 2006, 344: 948-954. 10.1016\/j.bbrc.2006.04.008.","journal-title":"Biochem Biophys Res Commun"},{"key":"136_CR34","unstructured":"Guide to GO Evidence Codes.http:\/\/www.geneontology.org\/GO.evidence.shtml,"},{"key":"136_CR35","doi-asserted-by":"publisher","first-page":"1262","DOI":"10.1093\/bioinformatics\/bts113","volume":"28","author":"D Osumi-Sutherland","year":"2012","unstructured":"Osumi-Sutherland D, Reeve S, Mungall CJ, Neuhaus F, Ruttenberg A, Jefferis GSXE, Armstrong JD: A strategy for building neuroanatomy ontologies. Bioinforma Oxf Engl. 2012, 28: 1262-1269. 10.1093\/bioinformatics\/bts113.","journal-title":"Bioinforma Oxf Engl"},{"key":"136_CR36","doi-asserted-by":"publisher","first-page":"411","DOI":"10.1093\/bioinformatics\/btr677","volume":"28","author":"N Milyaev","year":"2012","unstructured":"Milyaev N, Osumi-Sutherland D, Reeve S, Burton N, Baldock RA, Armstrong JD: The Virtual Fly Brain browser and query interface. Bioinforma Oxf Engl. 2012, 28: 411-415. 10.1093\/bioinformatics\/btr677.","journal-title":"Bioinforma Oxf Engl"},{"key":"136_CR37","unstructured":"IntAct Database.http:\/\/www.ebi.ac.uk\/intact\/,"},{"key":"136_CR38","unstructured":"Reactome.http:\/\/www.reactome.org\/ReactomeGWT\/entrypoint.html,"},{"key":"136_CR39","doi-asserted-by":"publisher","first-page":"D619","DOI":"10.1093\/nar\/gkn863","volume":"37","author":"L Matthews","year":"2009","unstructured":"Matthews L, Gopinath G, Gillespie M, Caudy M, Croft D, de Bono B, Garapati P, Hemish J, Hermjakob H, Jassal B, Kanapin A, Lewis S, Mahajan S, May B, Schmidt E, Vastrik I, Wu G, Birney E, Stein L, D\u2019Eustachio P: Reactome knowledgebase of human biological pathways and processes. Nucleic Acids Res. 2009, 37: D619-D622. 10.1093\/nar\/gkn863.","journal-title":"Nucleic Acids Res"},{"key":"136_CR40","doi-asserted-by":"publisher","first-page":"92","DOI":"10.1186\/1752-0509-4-92","volume":"4","author":"C Li","year":"2010","unstructured":"Li C, Donizelli M, Rodriguez N, Dharuri H, Endler L, Chelliah V, Li L, He E, Henry A, Stefan MI, Snoep JL, Hucka M, Le Nov\u00e8re N, Laibe C: BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models. BMC Syst Biol. 2010, 4: 92-10.1186\/1752-0509-4-92.","journal-title":"BMC Syst Biol"},{"key":"136_CR41","unstructured":"BioModels Database.http:\/\/www.ebi.ac.uk\/biomodels-main\/,"},{"key":"136_CR42","unstructured":"NIF - axoneme Search Results.https:\/\/neuinfo.org\/mynif\/search.php?q=axoneme,"},{"key":"136_CR43","doi-asserted-by":"publisher","first-page":"653","DOI":"10.1007\/s00335-012-9421-3","volume":"23","author":"CL Smith","year":"2012","unstructured":"Smith CL, Eppig JT: The mammalian phenotype ontology as a unifying standard for experimental and high-throughput phenotyping data. Mamm Genome Off J Int Mamm Genome Soc. 2012, 23: 653-668. 10.1007\/s00335-012-9421-3.","journal-title":"Mamm Genome Off J Int Mamm Genome Soc"},{"key":"136_CR44","doi-asserted-by":"publisher","first-page":"R2","DOI":"10.1186\/gb-2010-11-1-r2","volume":"11","author":"CJ Mungall","year":"2010","unstructured":"Mungall CJ, Gkoutos GV, Smith CL, Haendel MA, Lewis SE, Ashburner M: Integrating phenotype ontologies across multiple species. Genome Biol. 2010, 11: R2-10.1186\/gb-2010-11-1-r2.","journal-title":"Genome Biol"},{"key":"136_CR45","doi-asserted-by":"publisher","first-page":"530","DOI":"10.1186\/1471-2105-11-530","volume":"11","author":"D n Clark JI","year":"2010","unstructured":"Clark JI D n, Dimmer EC, Mungall CJ: Formalization of taxon-based constraints to detect inconsistencies in annotation and ontology development. BMC Bioinformatics. 2010, 11: 530-10.1186\/1471-2105-11-530.","journal-title":"BMC Bioinformatics"},{"key":"136_CR46","doi-asserted-by":"publisher","first-page":"282","DOI":"10.1016\/j.jbi.2007.07.007","volume":"41","author":"W Ku\u015bnierczyk","year":"2008","unstructured":"Ku\u015bnierczyk W: Taxonomy-based partitioning of the gene ontology. J Biomed Inform. 2008, 41: 282-292. 10.1016\/j.jbi.2007.07.007.","journal-title":"J Biomed Inform"},{"key":"136_CR47","doi-asserted-by":"publisher","first-page":"1533","DOI":"10.1104\/pp.110.170688","volume":"155","author":"S Miyagishima","year":"2011","unstructured":"Miyagishima S: Mechanism of plastid division: from a bacterium to an organelle. Plant Physiol. 2011, 155: 1533-1544. 10.1104\/pp.110.170688.","journal-title":"Plant Physiol"},{"key":"136_CR48","first-page":"1183","volume-title":"Proc. 32nd Int. Conf. Very Large Data Bases","author":"L Chen","year":"2006","unstructured":"Chen L, Martone M, Gupta A, Fong L: OntoQuest: exploring ontological data made easy. Proc. 32nd Int. Conf. Very Large Data Bases. 2006, Seoul, South Korea, 1183-1186.http:\/\/www.vldb.org\/2011\/,"},{"key":"136_CR49","doi-asserted-by":"publisher","first-page":"2198","DOI":"10.1093\/bioinformatics\/btm112","volume":"23","author":"J Day-Richter","year":"2007","unstructured":"Day-Richter J, Harris MA, Haendel M, Lewis S: OBO-Edit\u2013an ontology editor for biologists. Bioinforma Oxf Engl. 2007, 23: 2198-2200. 10.1093\/bioinformatics\/btm112.","journal-title":"Bioinforma Oxf Engl"},{"key":"136_CR50","unstructured":"Continuous Integration of Open Biological Ontology Libraries | Bio-Ontologies SIG.http:\/\/bio-ontologies.knowledgeblog.org\/405,"},{"key":"136_CR51","unstructured":"elk-reasoner - A Java-based OWL 2 EL reasoner.http:\/\/code.google.com\/p\/elk-reasoner\/,"},{"key":"136_CR52","unstructured":"GO Ontology Downloads.http:\/\/geneontology.org\/GO.downloads.ontology.shtml,"},{"key":"136_CR53","unstructured":"Gene Ontology Documentation.http:\/\/geneontology.org\/GO.contents.doc.shtml,"},{"key":"136_CR54","unstructured":"GO Annotation: Policies and Guidelines.http:\/\/www.geneontology.org\/GO.annotation.shtml,"},{"key":"136_CR55","unstructured":"Contact GO.http:\/\/www.geneontology.org\/GO.contacts.shtml,"}],"container-title":["Journal of Biomedical Semantics"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1186\/2041-1480-4-20.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1186\/2041-1480-4-20","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1186\/2041-1480-4-20.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,9,22]],"date-time":"2026-09-22T00:26:32Z","timestamp":1790036792000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1186\/2041-1480-4-20"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2013,10,7]]},"references-count":55,"journal-issue":{"issue":"1","published-online":{"date-parts":[[2013,12]]}},"alternative-id":["136"],"URL":"https:\/\/doi.org\/10.1186\/2041-1480-4-20","relation":{},"ISSN":["2041-1480"],"issn-type":[{"value":"2041-1480","type":"electronic"}],"subject":[],"published":{"date-parts":[[2013,10,7]]},"assertion":[{"value":"21 June 2013","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"24 September 2013","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"7 October 2013","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}}],"article-number":"20"}}