{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,11]],"date-time":"2025-11-11T22:16:12Z","timestamp":1762899372104},"reference-count":27,"publisher":"Springer Science and Business Media LLC","issue":"S2","content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["BMC Bioinformatics"],"published-print":{"date-parts":[[2017,2]]},"DOI":"10.1186\/s12859-016-1446-2","type":"journal-article","created":{"date-parts":[[2017,2,15]],"date-time":"2017-02-15T10:35:57Z","timestamp":1487154957000},"update-policy":"http:\/\/dx.doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":30,"title":["Virtual reality assisted microscopy data visualization and colocalization analysis"],"prefix":"10.1186","volume":"18","author":[{"given":"Rensu P.","family":"Theart","sequence":"first","affiliation":[]},{"given":"Ben","family":"Loos","sequence":"additional","affiliation":[]},{"given":"Thomas R.","family":"Niesler","sequence":"additional","affiliation":[]}],"member":"297","published-online":{"date-parts":[[2017,2,15]]},"reference":[{"key":"1446_CR1","doi-asserted-by":"crossref","DOI":"10.1007\/978-3-540-68993-5","volume-title":"Advanced Imaging in Biology and Medicine: Technology, Software Environments, Applications","author":"C Sensen","year":"2009","unstructured":"Sensen C, Hallgrimsson B. Advanced Imaging in Biology and Medicine: Technology, Software Environments, Applications. New York: Springer; 2009, pp. 258\u201362."},{"key":"1446_CR2","doi-asserted-by":"crossref","unstructured":"Van Liere R, De Leeuw W, Mulder J, Verschure P, Visser A, Manders E, Van Driel R. Virtual reality in biological microscopic imaging. 2002 IEEE International Symposium on Biomedical Imaging. 2002 :879\u2013882.","DOI":"10.1109\/ISBI.2002.1029400"},{"key":"1446_CR3","volume-title":"SIGGRAPH \u201994 Proceedings of the 21st Annual Conference on Computer Graphics and Interactive Techniques","author":"M Regan","year":"1994","unstructured":"Regan M, Pose R. Priority rendering with a virtual reality address recalculation pipeline. In: SIGGRAPH \u201994 Proceedings of the 21st Annual Conference on Computer Graphics and Interactive Techniques. New York: ACM: 1994. p. 155\u201362."},{"issue":"3","key":"1446_CR4","doi-asserted-by":"crossref","first-page":"203","DOI":"10.1207\/s15327108ijap0303_3","volume":"3","author":"R Kennedy","year":"1993","unstructured":"Kennedy R, Lane N, Berbaum K, Lilienthal M. Simulator sickness questionnaire: An enhanced method for quantifying simulator sickness. Int J Aviat Psychol. 1993; 3(3):203\u201320.","journal-title":"Int J Aviat Psychol"},{"issue":"2","key":"1446_CR5","doi-asserted-by":"crossref","first-page":"29","DOI":"10.1109\/38.511","volume":"8","author":"M Levoy","year":"1988","unstructured":"Levoy M. Display of surfaces from volume data. IEEE Comput Graph Appl. 1988; 8(2):29\u201337.","journal-title":"IEEE Comput Graph Appl"},{"key":"1446_CR6","unstructured":"Unity - Game Engine. Accessed 07 March 2016. https:\/\/unity3d.com\/ ."},{"key":"1446_CR7","doi-asserted-by":"crossref","DOI":"10.1201\/b10629","volume-title":"Real-Time Volume Graphics","author":"K Engel","year":"2006","unstructured":"Engel K, Hadwinger M, Kniss J, Rezk-Salama C, Weiskopf D. Real-Time Volume Graphics, 1st. Massachusetts: AK Peters, Ltd.; 2006."},{"key":"1446_CR8","volume-title":"OpenGL Development Cookbook","author":"MM Movania","year":"2013","unstructured":"Movania MM. OpenGL Development Cookbook. Birmingham: Packt Publishing; 2013."},{"key":"1446_CR9","volume-title":"GPU-Based Interactive Visualization Techniques. Springer Science & Business Media","author":"D Weiskopf","year":"2006","unstructured":"Weiskopf D. GPU-Based Interactive Visualization Techniques. Springer Science & Business Media. New York: Pearson Education International; 2006."},{"issue":"4","key":"1446_CR10","doi-asserted-by":"crossref","first-page":"163","DOI":"10.1145\/37402.37422","volume":"21","author":"WE Lorensen","year":"1987","unstructured":"Lorensen WE, Cline HE. Marching cubes: A high resolution 3d surface construction algorithm. Comput Graph. 1987; 21(4):163\u20139.","journal-title":"Comput Graph"},{"issue":"6","key":"1446_CR11","doi-asserted-by":"crossref","first-page":"1587","DOI":"10.1109\/TVCG.2009.147","volume":"15","author":"A Chu","year":"2009","unstructured":"Chu A, Fu C, Hanson A. Gl4d: A gpu-based architecture for interactive 4d visualization. IEEE Trans Vis Comput Graph. 2009; 15(6):1587\u201394.","journal-title":"IEEE Trans Vis Comput Graph."},{"issue":"4","key":"1446_CR12","doi-asserted-by":"crossref","first-page":"723","DOI":"10.1152\/ajpcell.00462.2010","volume":"300","author":"K Dunn","year":"2011","unstructured":"Dunn K, Kamocka M, McDonald J. A practical guide to evaluating colocalization in biological microscopy. Am J Physiol Cell Physiol. 2011; 300(4):723\u201342.","journal-title":"Am J Physiol Cell Physiol"},{"key":"1446_CR13","volume-title":"ImageJ","author":"W Rasband","year":"1997","unstructured":"Rasband W. ImageJ. Bethesda, Maryland, USA: National Institutes of Health; 1997. National Institutes of Health."},{"key":"1446_CR14","unstructured":"Oculus. Accessed 07 March 2016. https:\/\/www.oculus.com\/en-us\/ ."},{"key":"1446_CR15","unstructured":"Leap Motion | Mac & PC Motion Controller for Games, Design, Virtual Reality & More. Accessed 07 March 2016. https:\/\/www.leapmotion.com\/ ."},{"key":"1446_CR16","volume-title":"PIE 8649, The Engineering Reality of Virtual Reality 2013, 864903","author":"A Febretti","year":"2013","unstructured":"Febretti A, Nishimoto A, Thigpen T, Talandis J, Long L, Pirtle J, Peterka T, Verlo A, Brown M, Plepys D, Sandin D, Renambot L, Johnson A, Leigh J. Cave2: a hybrid reality environment for immersive simulation and information analysis. In: PIE 8649, The Engineering Reality of Virtual Reality 2013, 864903. Bellingham: International Society for Optics and Photonics: 2013."},{"key":"1446_CR17","volume-title":"VRIC \u201913 Proceedings of the Virtual Reality International Conference: Laval Virtual Article No. 5","author":"M Vazquez-Duch\u00eane","year":"2013","unstructured":"Vazquez-Duch\u00eane M, Freis O, Denis A, Mion C, Jeanmaire C, Mine S, Pauly G. Virtual reality for skin exploration. In: VRIC \u201913 Proceedings of the Virtual Reality International Conference: Laval Virtual Article No. 5. New York: ACM: 2013."},{"key":"1446_CR18","volume-title":"International Conference on Brain Informatics and Health","author":"G Conte","year":"2015","unstructured":"Conte G, Allen Q, Forbes A, Ajilore O, Leow A. Braintrinsic: A virtual reality-compatible tool for exploring intrinsic topologies of the human brain connectome. In: International Conference on Brain Informatics and Health. Switzerland: Springer International Publishing: 2015. p. 67\u201376."},{"key":"1446_CR19","volume-title":"IS&T\/SPIE Electronic Imaging","author":"A Forbes","year":"2014","unstructured":"Forbes A, Villegas J, Almryde K, Plante E. A stereoscopic system for viewing the temporal evolution of brain activity clusters in response to linguistic stimuli. In: IS&T\/SPIE Electronic Imaging. Bellingham: International Society for Optics and Photonics: 2014. p. 90110\u20130110."},{"key":"1446_CR20","unstructured":"Kip. Pinch Move | Leap Motion Developers. Accessed 06 July 2016 (2016). https:\/\/developer.leapmotion.com\/gallery\/pinch-move ."},{"key":"1446_CR21","unstructured":"Kip. UI Input Module | Leap Motion Developers. Accessed 06 July 2016 (2016). https:\/\/developer.leapmotion.com\/gallery\/ui-input-module ."},{"key":"1446_CR22","unstructured":"Motion L. VR Best Practices Guidelines. Accessed 06 July 2016 (2015). https:\/\/developer.leapmotion.com\/vr-best-practices ."},{"key":"1446_CR23","unstructured":"Kip. Blocks | Leap Motion Developers. Accessed 17 July 2016 (2016). https:\/\/developer.leapmotion.com\/gallery\/blocks ."},{"key":"1446_CR24","volume-title":"Theory and Problems of Statistics","author":"M Spiegel","year":"1999","unstructured":"Spiegel M, Stephens L. Theory and Problems of Statistics, 3rd. New York: McGraw-Hill; 1999."},{"key":"1446_CR25","volume-title":"The Practive of Statistics","author":"D Yates","year":"1999","unstructured":"Yates D, Moore D, McCabe G. The Practive of Statistics, 1st. New York: W.H. Freeman; 1999."},{"key":"1446_CR26","volume-title":"Statistiese Metodes","author":"J Du Toit","year":"1989","unstructured":"Du Toit J. Statistiese Metodes. Stellenbosch: Kosmo Publishers Pty Ltd; 1989."},{"issue":"3\/4","key":"1446_CR27","doi-asserted-by":"crossref","first-page":"318","DOI":"10.2307\/2333350","volume":"40","author":"G Box","year":"1953","unstructured":"Box G. Non-normality and test on variances. Biometrika. 1953; 40(3\/4):318\u201335.","journal-title":"Biometrika"}],"container-title":["BMC Bioinformatics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s12859-016-1446-2.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2017,6,25]],"date-time":"2017-06-25T10:35:51Z","timestamp":1498386951000},"score":1,"resource":{"primary":{"URL":"http:\/\/bmcbioinformatics.biomedcentral.com\/articles\/10.1186\/s12859-016-1446-2"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,2]]},"references-count":27,"journal-issue":{"issue":"S2","published-print":{"date-parts":[[2017,2]]}},"alternative-id":["1446"],"URL":"https:\/\/doi.org\/10.1186\/s12859-016-1446-2","relation":{},"ISSN":["1471-2105"],"issn-type":[{"value":"1471-2105","type":"electronic"}],"subject":[],"published":{"date-parts":[[2017,2]]},"article-number":"64"}}