{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,7,17]],"date-time":"2024-07-17T00:11:42Z","timestamp":1721175102429},"reference-count":45,"publisher":"Springer Science and Business Media LLC","issue":"S2","license":[{"start":{"date-parts":[[2019,4,1]],"date-time":"2019-04-01T00:00:00Z","timestamp":1554076800000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["BMC Med Inform Decis Mak"],"published-print":{"date-parts":[[2019,4]]},"DOI":"10.1186\/s12911-019-0771-6","type":"journal-article","created":{"date-parts":[[2019,4,9]],"date-time":"2019-04-09T00:05:34Z","timestamp":1554768334000},"update-policy":"http:\/\/dx.doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":11,"title":["On building a diabetes centric knowledge base via mining the web"],"prefix":"10.1186","volume":"19","author":[{"given":"Fan","family":"Gong","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yilei","family":"Chen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Haofen","family":"Wang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hao","family":"Lu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2019,4,9]]},"reference":[{"issue":"9","key":"771_CR1","doi-asserted-by":"publisher","first-page":"825","DOI":"10.1056\/NEJMsa1102519","volume":"365","author":"RD Cebul","year":"2011","unstructured":"Cebul RD, Love TE, Jain AK, Hebert CJ. Electronic health records and quality of diabetes care. N Engl J Med. 2011; 365(9):825\u201333. https:\/\/doi.org\/10.1056\/nejmsa1102519 .","journal-title":"N Engl J Med"},{"key":"771_CR2","doi-asserted-by":"publisher","unstructured":"Yin S, Chen D, Le J. Deep neural network based on translation model for diabetes knowledge graph. In: 2017 Fifth International Conference on Advanced Cloud and Big Data (CBD). IEEE: 2017. p. 318\u2013323. https:\/\/doi.org\/10.1109\/cbd.2017.62 .","DOI":"10.1109\/cbd.2017.62"},{"key":"771_CR3","doi-asserted-by":"publisher","unstructured":"Yang Z, Yang J, Liu W, Wu L, Xing L, Wang Y, Fan X, Cheng Y. T2d@ZJU: a knowledgebase integrating heterogeneous connections associated with type 2 diabetes mellitus. Database. 2013;2013. https:\/\/doi.org\/10.1093\/database\/bat052 .","DOI":"10.1093\/database\/bat052"},{"issue":"3","key":"771_CR4","doi-asserted-by":"publisher","first-page":"604","DOI":"10.1109\/TCBB.2014.2359442","volume":"12","author":"K Gopinath","year":"2015","unstructured":"Gopinath K, Jayakumararaj R, Karthikeyan M. DAPD: A knowledgebase for diabetes associated proteins. IEEE\/ACM Trans Comput Biol Bioinforma. 2015; 12(3):604\u201310. https:\/\/doi.org\/10.1109\/tcbb.2014.2359442 .","journal-title":"IEEE\/ACM Trans Comput Biol Bioinforma"},{"key":"771_CR5","doi-asserted-by":"publisher","unstructured":"Rotmensch M, Halpern Y, Tlimat A, Horng S, Sontag D. Learning a health knowledge graph from electronic medical records. Sci Reports. 2017; 7(1). https:\/\/doi.org\/10.1038\/s41598-017-05778-z .","DOI":"10.1038\/s41598-017-05778-z"},{"key":"771_CR6","unstructured":"Resource Description Framework (RDF). https:\/\/www.w3.org\/2001\/sw\/wiki\/RDF . Accessed 1 Feb 2019."},{"key":"771_CR7","unstructured":"RDF Schema 1.1. http:\/\/www.w3.org\/TR\/rdf-schema\/ . Accessed 1 Feb 2019."},{"key":"771_CR8","unstructured":"Web Ontology Language (OWL). https:\/\/www.w3.org\/OWL\/ . Accessed 1 Feb 2019."},{"key":"771_CR9","unstructured":"Frequently Asked Questions About Diabetes. http:\/\/www.webmd.com\/diabetes\/diabetes-faq . Accessed 1 Feb 2019."},{"issue":"1","key":"771_CR10","doi-asserted-by":"publisher","first-page":"138","DOI":"10.1186\/1477-7525-11-138","volume":"11","author":"A Schmitt","year":"2013","unstructured":"Schmitt A, Gahr A, Hermanns N, Kulzer B, Huber J, Haak T. The diabetes self-management questionnaire (DSMQ): development and evaluation of an instrument to assess diabetes self-care activities associated with glycaemic control. Health Qual Life Outcome. 2013; 11(1):138. https:\/\/doi.org\/10.1186\/1477-7525-11-138 .","journal-title":"Health Qual Life Outcome"},{"key":"771_CR11","unstructured":"Abadi DJ, Marcus A, Madden S, Hollenbach KJ. Scalable semantic web data management using vertical partitioning In: Koch C, Gehrke J, Garofalakis MN, Srivastava D, Aberer K, Deshpande A, Florescu D, Chan CY, Ganti V, Kanne C, Klas W, Neuhold EJ, editors. Proceedings of the 33rd International Conference on Very Large Data Bases, University of Vienna, Austria, September 23-27, 2007. ACM: 2007. p. 411\u2013422. http:\/\/www.vldb.org\/conf\/2007\/papers\/research\/p411-abadi.pdf ."},{"key":"771_CR12","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1016\/j.websem.2016.06.002","volume":"39","author":"E Daskalaki","year":"2016","unstructured":"Daskalaki E, Flouris G, Fundulaki I, Saveta T. Instance matching benchmarks in the era of linked data. J Web Semant. 2016; 39:1\u201314. https:\/\/doi.org\/10.1016\/j.websem.2016.06.002 .","journal-title":"J Web Semant"},{"key":"771_CR13","unstructured":"Mausam M. Open information extraction systems and downstream applications. In: Proceedings of the Twenty-Fifth International Joint Conference on Artificial Intelligence, IJCAI\u201916. AAAI Press: 2016. p. 4074\u20134077. http:\/\/dl.acm.org\/citation.cfm?id=3061053.3061220 . Accessed 1 Feb 2019."},{"issue":"2","key":"771_CR14","doi-asserted-by":"publisher","first-page":"167","DOI":"10.3233\/SW-140134","volume":"6","author":"L Jens","year":"2015","unstructured":"Jens L, Robert I, Max J, Anja J, Dimitris K, Mendes PN, Sebastian H, Mohamed M, van Kleef P, Auer S, et al.Dbpedia\u2013a large-scale, multilingual knowledge base extracted from wikipedia. Semant Web. 2015; 6(2):167\u201395. https:\/\/doi.org\/10.3233\/SW-140134 .","journal-title":"Semant Web"},{"key":"771_CR15","volume-title":"Lecture Notes in Computer Science","author":"T Rebele","year":"2016","unstructured":"Rebele T, Suchanek F, Hoffart J, Biega J, Kuzey E, Weikum G. YAGO: A multilingual knowledge base from wikipedia, wordnet, and geonames. In: Lecture Notes in Computer Science. Cham: Springer International Publishing: 2016. p. 177\u2013185."},{"key":"771_CR16","volume-title":"The Semantic Web \u2013 ISWC 2011","author":"X Niu","year":"2011","unstructured":"Niu X, Sun X, Wang H, Rong S, Qi G, Yu Y. Zhishi.me - weaving chinese linking open data. In: The Semantic Web \u2013 ISWC 2011. Berlin: Springer Berlin Heidelberg: 2011. p. 205\u2013220."},{"key":"771_CR17","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1155\/2014\/848631","volume":"2014","author":"F Hu","year":"2014","unstructured":"Hu F, Shao Z, Ruan T. Self-supervised chinese ontology learning from online encyclopedias. Sci World J. 2014; 2014:1\u201313. https:\/\/doi.org\/10.1155\/2014\/848631 .","journal-title":"Sci World J"},{"key":"771_CR18","unstructured":"Sogou. https:\/\/www.sogou.com\/ . Accessed 1 Feb 2019."},{"key":"771_CR19","unstructured":"Baidu. http:\/\/www.baidu.com . Accessed 1 Feb 2019."},{"issue":"90001","key":"771_CR20","doi-asserted-by":"publisher","first-page":"267","DOI":"10.1093\/nar\/gkh061","volume":"32","author":"O Bodenreider","year":"2004","unstructured":"Bodenreider O. The unified medical language system (UMLS): integrating biomedical terminology. Nucleic Acids Res. 2004; 32(90001):267\u201370. https:\/\/doi.org\/10.1093\/nar\/gkh061 .","journal-title":"Nucleic Acids Res"},{"issue":"1","key":"771_CR21","first-page":"662","volume":"8","author":"M Stearns","year":"2001","unstructured":"Stearns M, Price C, Spackman K, Wang A. Snomed clinical terms: overview of the development process and project status. Proc\/AMIA Annu Symp AMIA Symp. 2001; 8(1):662\u2013666.","journal-title":"Proc\/AMIA Annu Symp AMIA Symp"},{"issue":"D1","key":"771_CR22","doi-asserted-by":"publisher","first-page":"1091","DOI":"10.1093\/nar\/gkt1068","volume":"42","author":"V Law","year":"2013","unstructured":"Law V, Knox C, Djoumbou Y, Jewison T, Guo AC, Liu Y, Maciejewski A, Arndt D, Wilson M, Neveu V, Tang A, Gabriel G, Ly C, Adamjee S, Dame ZT, Han B, Zhou Y, Wishart DS. DrugBank 4.0: shedding new light on drug metabolism. Nucleic Acids Res. 2013; 42(D1):1091\u20137. https:\/\/doi.org\/10.1093\/nar\/gkt1068 .","journal-title":"Nucleic Acids Res"},{"issue":"D1","key":"771_CR23","doi-asserted-by":"publisher","first-page":"1075","DOI":"10.1093\/nar\/gkv1075","volume":"44","author":"M Kuhn","year":"2015","unstructured":"Kuhn M, Letunic I, Jensen LJ, Bork P. The SIDER database of drugs and side effects. Nucleic Acids Res. 2015; 44(D1):1075\u20139. https:\/\/doi.org\/10.1093\/nar\/gkv1075 .","journal-title":"Nucleic Acids Res"},{"key":"771_CR24","doi-asserted-by":"publisher","unstructured":"Ernst P, Siu A, Weikum G. KnowLife: a versatile approach for constructing a large knowledge graph for biomedical sciences. BMC Bioinformatics. 2015; 16(1). https:\/\/doi.org\/10.1186\/s12859-015-0549-5 .","DOI":"10.1186\/s12859-015-0549-5"},{"issue":"Database issue","key":"771_CR25","doi-asserted-by":"publisher","first-page":"544","DOI":"10.1093\/nar\/gki095","volume":"33","author":"LJ Smink","year":"2004","unstructured":"Smink LJ. T1dbase, a community web-based resource for type 1 diabetes research. Nucleic Acids Res. 2004; 33(Database issue):544\u20139. https:\/\/doi.org\/10.1093\/nar\/gki095 .","journal-title":"Nucleic Acids Res"},{"issue":"1","key":"771_CR26","doi-asserted-by":"publisher","first-page":"320","DOI":"10.1186\/1471-2164-9-320","volume":"9","author":"S Agrawal","year":"2008","unstructured":"Agrawal S, Dimitrova N, Nathan P, Udayakumar K, Lakshmi SS, Sriram S, Manjusha N, Sengupta U. T2d-db: An integrated platform to study the molecular basis of type 2 diabetes. BMC Genomics. 2008; 9(1):320. https:\/\/doi.org\/10.1186\/1471-2164-9-320 .","journal-title":"BMC Genomics"},{"key":"771_CR27","doi-asserted-by":"publisher","unstructured":"Lim JE, Hong K-W, Jin H-S, Kim YS, Park HK, Oh B. Type 2 diabetes genetic association database manually curated for the study design and odds ratio. BMC Med Inform Decis Making. 2010;10(1). https:\/\/doi.org\/10.1186\/1472-6947-10-76 .","DOI":"10.1186\/1472-6947-10-76"},{"key":"771_CR28","doi-asserted-by":"publisher","unstructured":"Yang Z, Yang J, Liu W, Wu L, Xing L, Wang Y, Fan X, Cheng Y. T2d@ZJU: a knowledgebase integrating heterogeneous connections associated with type 2 diabetes mellitus. Database. 2013;2013. https:\/\/doi.org\/10.1093\/database\/bat052 .","DOI":"10.1093\/database\/bat052"},{"key":"771_CR29","unstructured":"39Health. http:\/\/www.39.net\/ . Accessed 1 Feb 2019."},{"key":"771_CR30","unstructured":"99Health. http:\/\/www.99.com.cn\/ . Accessed 1 Feb 2019."},{"key":"771_CR31","unstructured":"FhHealth. http:\/\/www.fh21.com.cn\/ . Accessed 1 Feb 2019."},{"key":"771_CR32","unstructured":"Familydoctotr. http:\/\/www.familydoctor.com.cn\/ . Accessed 1 Feb 2019."},{"key":"771_CR33","unstructured":"GlobalHospital. http:\/\/www.qqyy.com\/ . Accessed 1 Feb 2019."},{"key":"771_CR34","unstructured":"PcBaby. http:\/\/www.pcbaby.com.cn\/ . Accessed 1 Feb 2019."},{"key":"771_CR35","unstructured":"JianKe. http:\/\/www.jianke.com\/ . Accessed 1 Feb 2019."},{"key":"771_CR36","unstructured":"120Ask. http:\/\/www.120ask.com\/ . Accessed 1 Feb 2019."},{"issue":"4","key":"771_CR37","doi-asserted-by":"publisher","first-page":"219","DOI":"10.14778\/1938545.1938547","volume":"4","author":"N Dalvi","year":"2011","unstructured":"Dalvi N, Kumar R, Soliman M. Automatic wrappers for large scale web extraction. Proc VLDB Endowment. 2011; 4(4):219\u201330. https:\/\/doi.org\/10.14778\/1938545.1938547 .","journal-title":"Proc VLDB Endowment"},{"key":"771_CR38","volume-title":"SWAIE","author":"F Ciravegna","year":"2012","unstructured":"Ciravegna F, Gentile AL, Zhang Z. LODIE: linked open data for web-scale information extraction. In: SWAIE. cham: Springer International Publishing: 2012. p. 11\u201322."},{"key":"771_CR39","unstructured":"D, 2RQ Accessing Relational Databases as Virtual RDF Graphs. http:\/\/d2rq.org\/ ."},{"key":"771_CR40","doi-asserted-by":"publisher","unstructured":"Je\u00c5ek P, Mou\u00c4ek R. Semantic framework for mapping object-oriented model to semantic web languages. Front Neuroinformatics. 2015; 9. https:\/\/doi.org\/10.3389\/fninf.2015.00003 .","DOI":"10.3389\/fninf.2015.00003"},{"key":"771_CR41","doi-asserted-by":"publisher","unstructured":"Eisenberg V, Kanza Y. D2rq\/update: Updating relational data via virtual rdf. In: Proceedings of the 21st International Conference Companion on World Wide Web. ACM Press: 2012. https:\/\/doi.org\/10.1145\/2187980.2188095 .","DOI":"10.1145\/2187980.2188095"},{"key":"771_CR42","unstructured":"The 10th Revision of the International Statistical Classification of Diseases and Related Health Problems. http:\/\/www.who.int\/classifications\/apps\/icd\/icd10online\/ . Accessed 1 Feb 2019."},{"key":"771_CR43","unstructured":"Chinese Descriptions and Aliases of ICD-10 in Wikipedia. https:\/\/zh.wikipedia.org\/wiki\/ICD-10 . Accessed 1 Feb 2019."},{"key":"771_CR44","doi-asserted-by":"publisher","unstructured":"Euzenat J, Shvaiko P. Ontology Matching: Springer Berlin Heidelberg; 2013. https:\/\/doi.org\/10.1007\/978-3-642-38721-0 .","DOI":"10.1007\/978-3-642-38721-0"},{"issue":"1","key":"771_CR45","doi-asserted-by":"crossref","first-page":"1","DOI":"10.1111\/j.2517-6161.1977.tb01600.x","volume":"39","author":"AP Dempster","year":"1977","unstructured":"Dempster AP, Laird NM, Rubin DB. Maximum likelihood from incomplete data via the em algorithm. J R Stat Soc Ser B Methodol. 1977; 39(1):1\u201338.","journal-title":"J R Stat Soc Ser B Methodol"}],"container-title":["BMC Medical Informatics and Decision Making"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s12911-019-0771-6.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1186\/s12911-019-0771-6\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s12911-019-0771-6.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2024,7,16]],"date-time":"2024-07-16T18:52:08Z","timestamp":1721155928000},"score":1,"resource":{"primary":{"URL":"https:\/\/bmcmedinformdecismak.biomedcentral.com\/articles\/10.1186\/s12911-019-0771-6"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2019,4]]},"references-count":45,"journal-issue":{"issue":"S2","published-print":{"date-parts":[[2019,4]]}},"alternative-id":["771"],"URL":"https:\/\/doi.org\/10.1186\/s12911-019-0771-6","relation":{},"ISSN":["1472-6947"],"issn-type":[{"value":"1472-6947","type":"electronic"}],"subject":[],"published":{"date-parts":[[2019,4]]},"assertion":[{"value":"9 April 2019","order":1,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"Not applicable.","order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Ethics approval and consent to participate"}},{"value":"Not applicable.","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"Consent for publication"}},{"value":"The authors declare that they have no competing interests.","order":3,"name":"Ethics","group":{"name":"EthicsHeading","label":"Competing interests"}},{"value":"Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.","order":4,"name":"Ethics","group":{"name":"EthicsHeading","label":"Publisher\u2019s Note"}}],"article-number":"49"}}