{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,2,19]],"date-time":"2026-02-19T17:15:59Z","timestamp":1771521359447,"version":"3.50.1"},"reference-count":36,"publisher":"Springer Science and Business Media LLC","issue":"1","content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["BMC Genomics"],"published-print":{"date-parts":[[2017,12]]},"DOI":"10.1186\/s12864-016-3416-5","type":"journal-article","created":{"date-parts":[[2017,1,13]],"date-time":"2017-01-13T11:38:58Z","timestamp":1484307538000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":17,"title":["Whole genome resequencing reveals diagnostic markers for investigating global migration and hybridization between minke whale species"],"prefix":"10.1186","volume":"18","author":[{"ORCID":"https:\/\/orcid.org\/0000-0001-7381-1849","authenticated-orcid":false,"given":"Ketil","family":"Malde","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Bj\u00f8rghild B.","family":"Seliussen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mar\u00eda","family":"Quintela","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Geir","family":"Dahle","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Francois","family":"Besnier","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hans J.","family":"Skaug","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Nils","family":"\u00d8ien","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hiroko K.","family":"Solvang","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Tore","family":"Haug","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Rasmus","family":"Skern-Mauritzen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Naohisa","family":"Kanda","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Luis A.","family":"Pastene","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Inge","family":"Jonassen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Kevin A.","family":"Glover","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2017,1,13]]},"reference":[{"issue":"1","key":"3416_CR1","doi-asserted-by":"crossref","first-page":"83","DOI":"10.1146\/annurev.ecolsys.27.1.83","volume":"27","author":"JM Rhymer","year":"1996","unstructured":"Rhymer JM, Simberloff D. Extinction by hybridization and introgression. Annu Rev Ecol Syst. 1996;27(1):83\u2013109.","journal-title":"Annu Rev Ecol Syst"},{"key":"3416_CR2","unstructured":"Allendorf FW, Luikart G. Conservation and the genetics of populations. Malden: Blackwell Pub; 2007: xix, 642 p."},{"issue":"1","key":"3416_CR3","first-page":"1","volume":"21","author":"PM Vitousek","year":"1997","unstructured":"Vitousek PM, D\u2019antonio CM, Loope LL, Rejmanek M, Westbrook R. Introduced species: a significant component of human-caused global change. N Z J Ecol. 1997;21(1):1\u201316.","journal-title":"N Z J Ecol"},{"issue":"12","key":"3416_CR4","doi-asserted-by":"crossref","first-page":"e15197","DOI":"10.1371\/journal.pone.0015197","volume":"5","author":"KA Glover","year":"2010","unstructured":"Glover KA, Kanda N, Haug T, Pastene LA, \u00d8ien N, Goto M, Seliussen BB, Skaug HJ. Migration of Antarctic minke whales to the Arctic. PLoS One. 2010;5(12):e15197.","journal-title":"PLoS One"},{"issue":"4","key":"3416_CR5","doi-asserted-by":"crossref","first-page":"476","DOI":"10.1098\/rsbl.2005.0351","volume":"1","author":"C Pomilla","year":"2005","unstructured":"Pomilla C, Rosenbaum HC. Against the current: an inter-oceanic whale migration event. Biol Lett. 2005;1(4):476\u20139.","journal-title":"Biol Lett"},{"key":"3416_CR6","first-page":"1","volume":"27","author":"H Omura","year":"1975","unstructured":"Omura H. Ostelogical study of the minke whale from the Antarctic. Scientific Reports of the Whales Research Institute. 1975;27:1\u201336.","journal-title":"Scientific Reports of the Whales Research Institute"},{"issue":"1","key":"3416_CR7","doi-asserted-by":"crossref","first-page":"25","DOI":"10.1186\/1471-2156-14-25","volume":"14","author":"KA Glover","year":"2013","unstructured":"Glover KA, Kanda N, Haug T, Pastene LA, \u00d8ien N, Seliussen BB, S\u00f8rvik AGE, Skaug HJ. Hybrids between common and Antarctic minke whales are fertile and can back-cross. BMC Genet. 2013;14(1):25.","journal-title":"BMC Genet"},{"issue":"7","key":"3416_CR8","doi-asserted-by":"crossref","first-page":"1481","DOI":"10.1111\/j.1365-294X.2007.03244.x","volume":"16","author":"LA Pastene","year":"2007","unstructured":"Pastene LA, Goto M, Kanda N, Zerbini AN, Kerem DAN, Watanabe K, Bessho Y, Hasegawa M, Nielsen R, Larsen F, et al. Radiation and speciation of pelagic organisms during periods of global warming: the case of the common minke whale, Balaenoptera acutorostrata. Mol Ecol. 2007;16(7):1481\u201395.","journal-title":"Mol Ecol"},{"key":"3416_CR9","unstructured":"Wada S. Genetic distinction between two minke whale stocks in the Okhotsk Sea coast of Japan. In: Reports of the International Whaling Commission. vol. SC\/43\/Mi32; 1991."},{"key":"3416_CR10","unstructured":"Rice DW. Marine Mammals of the World. Systematics and Distribution, vol. 4. 1998."},{"issue":"3","key":"3416_CR11","doi-asserted-by":"crossref","first-page":"313","DOI":"10.1111\/j.1467-2979.2011.00447.x","volume":"13","author":"KA Glover","year":"2012","unstructured":"Glover KA, Haug T, \u00d8ien N, Wall\u00f8e L, Lindblom L, Seliussen BB, Skaug HJ. The Norwegian minke whale DNA register: a data base monitoring commercial harvest and trade of whale products. Fish Fish. 2012;13(3):313\u201332.","journal-title":"Fish Fish"},{"issue":"7013","key":"3416_CR12","doi-asserted-by":"crossref","first-page":"100","DOI":"10.1038\/nature02996","volume":"432","author":"A Atkinson","year":"2004","unstructured":"Atkinson A, Siegel V, Pakhomov E, Rothery P. Long-term decline in krill stock and increase in salps within the Southern Ocean. Nature. 2004;432(7013):100\u20133.","journal-title":"Nature"},{"issue":"12","key":"3416_CR13","doi-asserted-by":"crossref","first-page":"1509","DOI":"10.1007\/s00300-008-0491-3","volume":"31","author":"K Konishi","year":"2008","unstructured":"Konishi K, Tamura T, Zenitani R, Bando T, Kato H, Wall\u00f8e L. Decline in energy storage in the Antarctic minke whale (Balaenoptera bonaerensis) in the Southern Ocean. Polar Biol. 2008;31(12):1509\u201320.","journal-title":"Polar Biol"},{"issue":"2","key":"3416_CR14","doi-asserted-by":"crossref","first-page":"205","DOI":"10.1007\/s00300-013-1424-3","volume":"37","author":"K Konishi","year":"2014","unstructured":"Konishi K, Hakamada T, Kiwada H, Kitakado T, Wall\u00f8e L. Decrease in stomach contents in the Antarctic minke whale (Balaenoptera bonaerensis) in the Southern Ocean. Polar Biol. 2014;37(2):205\u201315.","journal-title":"Polar Biol"},{"issue":"1","key":"3416_CR15","doi-asserted-by":"crossref","first-page":"176","DOI":"10.1186\/1471-2148-9-176","volume":"9","author":"BM Fitzpatrick","year":"2009","unstructured":"Fitzpatrick BM, Johnson JR, Kump DK, Shaffer HB, Smith JJ, Voss SR. Rapid fixation of non-native alleles revealed by genome-wide SNP analysis of hybrid tiger salamanders. BMC Evol Biol. 2009;9(1):176.","journal-title":"BMC Evol Biol"},{"issue":"1","key":"3416_CR16","doi-asserted-by":"crossref","first-page":"131","DOI":"10.1186\/1471-2148-12-131","volume":"12","author":"BM Fitzpatrick","year":"2012","unstructured":"Fitzpatrick BM. Estimating ancestry and heterozygosity of hybrids using molecular markers. BMC Evol Biol. 2012;12(1):131.","journal-title":"BMC Evol Biol"},{"issue":"1","key":"3416_CR17","doi-asserted-by":"crossref","first-page":"13","DOI":"10.1186\/s12864-015-1213-1","volume":"16","author":"JY Park","year":"2015","unstructured":"Park JY, An Y-R, Kanda N, An C-M, An HS, Kang J-H, Kim EM, An D-H, Jung H, Joung M, et al. Cetaceans evolution: insights from the genome sequences of common minke whales. BMC Genomics. 2015;16(1):13.","journal-title":"BMC Genomics"},{"issue":"1","key":"3416_CR18","doi-asserted-by":"crossref","first-page":"88","DOI":"10.1038\/ng.2835","volume":"46","author":"H-S Yim","year":"2014","unstructured":"Yim H-S, Cho YS, Guang X, Kang SG, Jeong J-Y, Cha S-S, Oh H-M, Lee J-H, Yang EC, Kwon KK, et al. Minke whale genome and aquatic adaptation in cetaceans. Nat Genet. 2014;46(1):88\u201392.","journal-title":"Nat Genet"},{"key":"3416_CR19","first-page":"15","volume":"2012","author":"S Kumar","year":"2012","unstructured":"Kumar S, Banks TW, Cloutier S. SNP discovery through Next-Generation Sequencing and its applications. International Journal of Plant Genomics. 2012;2012:15.","journal-title":"International Journal of Plant Genomics"},{"issue":"14","key":"3416_CR20","doi-asserted-by":"crossref","first-page":"1754","DOI":"10.1093\/bioinformatics\/btp324","volume":"25","author":"H Li","year":"2009","unstructured":"Li H, Durbin R. Fast and accurate short read alignment with Burrows\u2013Wheeler transform. Bioinformatics. 2009;25(14):1754\u201360.","journal-title":"Bioinformatics"},{"issue":"16","key":"3416_CR21","doi-asserted-by":"crossref","first-page":"2078","DOI":"10.1093\/bioinformatics\/btp352","volume":"25","author":"H Li","year":"2009","unstructured":"Li H, Handsaker B, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R, GPDP Subgroup. The Sequence Alignment\/Map format and SAMtools. Bioinformatics. 2009;25(16):2078\u20139.","journal-title":"Bioinformatics"},{"issue":"Suppl 6","key":"3416_CR22","doi-asserted-by":"crossref","first-page":"S20","DOI":"10.1186\/1471-2164-15-S6-S20","volume":"15","author":"K Malde","year":"2014","unstructured":"Malde K. Estimating the information value of polymorphic sites using pooled sequences. BMC Genomics. 2014;15 Suppl 6:S20.","journal-title":"BMC Genomics"},{"key":"3416_CR23","volume-title":"R: a language and environment for statistical computing","author":"Team RDC","year":"2015","unstructured":"Team RDC. R: a language and environment for statistical computing. Vienna: R Foundation for Statistical Computing; 2015."},{"issue":"6","key":"3416_CR24","doi-asserted-by":"crossref","first-page":"536","DOI":"10.1093\/jhered\/esh074","volume":"95","author":"S Piry","year":"2004","unstructured":"Piry S, Alapetite A, Cornuet J-M, Paetkau D, Baudouin L, Estoup A. GENECLASS2: a software for genetic assignment and first-generation migrant detection. J Hered. 2004;95(6):536\u20139.","journal-title":"J Hered"},{"issue":"17","key":"3416_CR25","doi-asserted-by":"crossref","first-page":"9197","DOI":"10.1073\/pnas.94.17.9197","volume":"94","author":"B Rannala","year":"1997","unstructured":"Rannala B, Mountain JL. Detecting immigration by using multilocus genotypes. Proc Natl Acad Sci U S A. 1997;94(17):9197\u2013201.","journal-title":"Proc Natl Acad Sci U S A"},{"issue":"2","key":"3416_CR26","doi-asserted-by":"crossref","first-page":"945","DOI":"10.1093\/genetics\/155.2.945","volume":"155","author":"JK Pritchard","year":"2000","unstructured":"Pritchard JK, Stephens M, Donnelly P. Inference of population structure using multilocus genotype data. Genetics. 2000;155(2):945\u201359.","journal-title":"Genetics"},{"issue":"7","key":"3416_CR27","doi-asserted-by":"crossref","first-page":"e70651","DOI":"10.1371\/journal.pone.0070651","volume":"8","author":"F Besnier","year":"2013","unstructured":"Besnier F, Glover KA. ParallelStructure: a R package to distribute parallel runs of the population genetics program STRUCTURE on multi-core computers. PLoS One. 2013;8(7):e70651.","journal-title":"PLoS One"},{"issue":"8","key":"3416_CR28","doi-asserted-by":"crossref","first-page":"2611","DOI":"10.1111\/j.1365-294X.2005.02553.x","volume":"14","author":"G Evanno","year":"2005","unstructured":"Evanno G, Regnaut S, Goudet J. Detecting the number of clusters of individuals using the software structure: a simulation study. Mol Ecol. 2005;14(8):2611\u201320.","journal-title":"Mol Ecol"},{"issue":"14","key":"3416_CR29","doi-asserted-by":"crossref","first-page":"1801","DOI":"10.1093\/bioinformatics\/btm233","volume":"23","author":"M Jakobsson","year":"2007","unstructured":"Jakobsson M, Rosenberg NA. CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure. Bioinformatics. 2007;23(14):1801\u20136.","journal-title":"Bioinformatics"},{"issue":"2","key":"3416_CR30","first-page":"119","volume":"52","author":"A Agresti","year":"1998","unstructured":"Agresti A, Coull BA. Approximate is better than \u201cexact\u201d for interval estimation of binomial proportions. Am Stat. 1998;52(2):119\u201326.","journal-title":"Am Stat"},{"key":"3416_CR31","first-page":"277","volume":"51","author":"PW Arnold","year":"2005","unstructured":"Arnold PW, Birtles RA, Dunstan A, Lukoschek V, Matthews M. Colour patterns of the dwarf minke whale Balaenoptera acutorostrata sensu lato: description, cladistic analysis and taxonomic implications. Memoirs of the Queensland Museum. 2005;51:277\u2013307.","journal-title":"Memoirs of the Queensland Museum"},{"key":"3416_CR32","unstructured":"Pastene LA, Goto M, Kanda N. Progress in the development of stock structure hypotheses for western North Pacific common minke whales. SC\/62\/NPM12rev 2010."},{"issue":"1","key":"3416_CR33","doi-asserted-by":"crossref","first-page":"63","DOI":"10.1111\/j.1365-294X.2005.02773.x","volume":"15","author":"J-P V\u00e4h\u00e4","year":"2006","unstructured":"V\u00e4h\u00e4 J-P, Primmer CR. Efficiency of model-based Bayesian methods for detecting hybrid individuals under different hybridization scenarios and with different numbers of loci. Mol Ecol. 2006;15(1):63\u201372.","journal-title":"Mol Ecol"},{"issue":"3","key":"3416_CR34","doi-asserted-by":"crossref","first-page":"456","DOI":"10.1111\/j.1365-294X.2010.04961.x","volume":"20","author":"KA Winkler","year":"2011","unstructured":"Winkler KA, Pamminger-Lahnsteiner B, Wanzenb\u00d6Ck J, Weiss S. Hybridization and restricted gene flow between native and introduced stocks of Alpine whitefish (Coregonus sp.) across multiple environments. Mol Ecol. 2011;20(3):456\u201372.","journal-title":"Mol Ecol"},{"issue":"9","key":"3416_CR35","doi-asserted-by":"crossref","first-page":"1068","DOI":"10.1111\/eva.12166","volume":"7","author":"J Dierking","year":"2014","unstructured":"Dierking J, Phelps L, Pr\u00e6bel K, Ramm G, Prigge E, Borcherding J, Brunke M, Eizaguirre C. Anthropogenic hybridization between endangered migratory and commercially harvested stationary whitefish taxa (Coregonus spp.). Evol Appl. 2014;7(9):1068\u201383.","journal-title":"Evol Appl"},{"issue":"5","key":"3416_CR36","doi-asserted-by":"crossref","first-page":"442","DOI":"10.1038\/hdy.2009.8","volume":"102","author":"C Burgarella","year":"2009","unstructured":"Burgarella C, Lorenzo Z, Jabbour-Zahab R, Lumaret R, Guichoux E, Petit RJ, Soto A, Gil L. Detection of hybrids in nature: application to oaks (Quercus suber and Q. ilex). Heredity. 2009;102(5):442\u201352.","journal-title":"Heredity"}],"container-title":["BMC Genomics"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s12864-016-3416-5.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,7,21]],"date-time":"2022-07-21T16:29:18Z","timestamp":1658420958000},"score":1,"resource":{"primary":{"URL":"http:\/\/bmcgenomics.biomedcentral.com\/articles\/10.1186\/s12864-016-3416-5"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2017,1,13]]},"references-count":36,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2017,12]]}},"alternative-id":["3416"],"URL":"https:\/\/doi.org\/10.1186\/s12864-016-3416-5","relation":{},"ISSN":["1471-2164"],"issn-type":[{"value":"1471-2164","type":"electronic"}],"subject":[],"published":{"date-parts":[[2017,1,13]]},"article-number":"76"}}