{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2024,7,14]],"date-time":"2024-07-14T09:35:43Z","timestamp":1720949743729},"reference-count":49,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2014,12,1]],"date-time":"2014-12-01T00:00:00Z","timestamp":1417392000000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["BMC Microbiol"],"published-print":{"date-parts":[[2014,12]]},"DOI":"10.1186\/s12866-014-0309-0","type":"journal-article","created":{"date-parts":[[2014,12,9]],"date-time":"2014-12-09T18:54:53Z","timestamp":1418151293000},"update-policy":"http:\/\/dx.doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":2,"title":["Genetic distance in the whole-genome perspective on Listeria monocytogenes strains F2-382 and NIHS-28 that show similar subtyping results"],"prefix":"10.1186","volume":"14","author":[{"given":"Daisuke","family":"Kyoui","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Hajime","family":"Takahashi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Satoko","family":"Miya","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Takashi","family":"Kuda","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Shizunobu","family":"Igimi","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Bon","family":"Kimura","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2014,12,10]]},"reference":[{"key":"309_CR1","doi-asserted-by":"publisher","first-page":"1236","DOI":"10.1016\/j.micinf.2007.05.011","volume":"9","author":"B Swaminathan","year":"2007","unstructured":"Swaminathan B, Gerner-Smidt P: The epidemiology of human listeriosis. Microbes Infect. 2007, 9: 1236-1243. 10.1016\/j.micinf.2007.05.011.","journal-title":"Microbes Infect"},{"key":"309_CR2","unstructured":"U.S. Department of Health and Human Service, U.S. Department of Agriculture: Quantitative Assessment of the Relative Risk to Public Health from Foodborne Listeria monocytogenes Among Selected Categories of Ready-to-Eat Foods. Washington, D.C; 2003."},{"key":"309_CR3","doi-asserted-by":"publisher","first-page":"263","DOI":"10.1016\/S0928-8244(02)00468-6","volume":"35","author":"J Rocourt","year":"2003","unstructured":"Rocourt J, BenEmbarek P, Toyofuku H, Schlundt J: Quantitative risk assessment of Listeria monocytogenes in ready-to-eat foods: the FAO\/WHO approach. FEMS Immunol Med Microbiol. 2003, 35: 263-267. 10.1016\/S0928-8244(02)00468-6.","journal-title":"FEMS Immunol Med Microbiol"},{"key":"309_CR4","series-title":"Microbiological risk assessment series 5","volume-title":"Risk Assessment of Listeria monocytogenes in Ready-to-Eat Foods","author":"World Health Organization, Food and Agriculture Organization","year":"2004","unstructured":"World Health Organization, Food and Agriculture Organization: Risk Assessment of Listeria monocytogenes in Ready-to-Eat Foods. 2004, Microbiological risk assessment series 5, Geneva"},{"key":"309_CR5","doi-asserted-by":"publisher","first-page":"327","DOI":"10.1016\/j.mimet.2012.01.002","volume":"88","author":"S Jadhave","year":"2012","unstructured":"Jadhave S, Bhave M, Palombo EA: Methods used for the detection and subtyping of Listeria monocytogenes. J Microbiol Methods. 2012, 88: 327-341. 10.1016\/j.mimet.2012.01.002.","journal-title":"J Microbiol Methods"},{"key":"309_CR6","doi-asserted-by":"publisher","first-page":"865","DOI":"10.1128\/JCM.01285-06","volume":"45","author":"EB Fugett","year":"2007","unstructured":"Fugett EB, Schoonmaker-Bopp D, Dumas NB, Corby J, Wiedmann M: Pulsed-Field Gel Electrophoresis (PFGE) analysis of temporally matched Listeria monocytogenes isolates from human clinical cases, foods, ruminant farms, and urban and natural environments reveals source-associated as well as widely distributed PFGE types. J Clin Microbiol. 2007, 45: 865-873. 10.1128\/JCM.01285-06.","journal-title":"J Clin Microbiol"},{"key":"309_CR7","doi-asserted-by":"publisher","first-page":"835","DOI":"10.1128\/JCM.01575-06","volume":"45","author":"Y Chen","year":"2007","unstructured":"Chen Y, Zhang W, Knebel SJ: Multi-virulence-locus sequence typing identifies single nucleotide polymorphisms which differentiate epidemic clones and outbreak strains of Listeria monocytogenes. J Clin Microbiol. 2007, 45: 835-846. 10.1128\/JCM.01575-06.","journal-title":"J Clin Microbiol"},{"key":"309_CR8","doi-asserted-by":"publisher","first-page":"239","DOI":"10.1016\/j.ijfoodmicro.2008.03.023","volume":"124","author":"S Miya","year":"2008","unstructured":"Miya S, Kimura B, Sato M, Takahashi H, Ishikawa T, Suda T, Takakura C, Fujii T, Wiedmann M: Development of a multilocus variable-number of tandem repeat typing method for Listeria monocytogenes serotype 4b strains. Int J Food Microbiol. 2008, 124: 239-249. 10.1016\/j.ijfoodmicro.2008.03.023.","journal-title":"Int J Food Microbiol"},{"key":"309_CR9","doi-asserted-by":"publisher","first-page":"1435","DOI":"10.1128\/JCM.02207-07","volume":"46","author":"KEV Sperry","year":"2008","unstructured":"Sperry KEV, Kathariou S, Edwards JS, Wolf LA: Multiple-locus variable-number tandem-repeat analysis as a tool for subtyping Listeria monocytogenes strains. J Clin Microbiol. 2008, 46: 1435-1450. 10.1128\/JCM.02207-07.","journal-title":"J Clin Microbiol"},{"key":"309_CR10","doi-asserted-by":"publisher","first-page":"2053","DOI":"10.1099\/13500872-141-9-2053","volume":"141","author":"OF Rasmussen","year":"1995","unstructured":"Rasmussen OF, Skouboe P, Dons L, Rossen L, Olsen JE:Listeria monocytogenes exists in at least three evolutionary lines: evidence from flagellin, invasive associated protein and listeriolysin O genes. Microbiology. 1995, 141: 2053-2061. 10.1099\/13500872-141-9-2053.","journal-title":"Microbiology"},{"key":"309_CR11","doi-asserted-by":"publisher","first-page":"3770","DOI":"10.1128\/JCM.01874-13","volume":"51","author":"T Cantinelli","year":"2013","unstructured":"Cantinelli T, Chenal-Francisque V, Diancourt L, Frezal L, Leclercq A, Wirth T, Lecuit M, Brisse S: \u201cEpidemic clones\u201d of Listeria monocytogenes are widespread and ancient clonal groups. J Clin Microbiol. 2013, 51: 3770-3779. 10.1128\/JCM.01874-13.","journal-title":"J Clin Microbiol"},{"key":"309_CR12","doi-asserted-by":"publisher","first-page":"e1000146","DOI":"10.1371\/journal.ppat.1000146","volume":"4","author":"M Ragon","year":"2008","unstructured":"Ragon M, Wirth T, Hollandt F, Lavenir R, Lecuit M, Monnier AL, Brisse S: A new perspective on Listeria monocytogenes evolution. PLoS Pathog. 2008, 4: e1000146. doi:10.1371\/journal.ppat.1000146","journal-title":"PLoS Pathog"},{"key":"309_CR13","doi-asserted-by":"publisher","first-page":"79","DOI":"10.1016\/j.ijmm.2010.05.002","volume":"301","author":"RH Orsi","year":"2011","unstructured":"Orsi RH, den Bakker HC, Wiedmann M:Listeria monocytogenes lineages: genomics, evolution, ecology, and phenotypic characteristics. Int J Med Microbiol. 2011, 301: 79-96. 10.1016\/j.ijmm.2010.05.002.","journal-title":"Int J Med Microbiol"},{"key":"309_CR14","doi-asserted-by":"publisher","first-page":"32","DOI":"10.1186\/1471-2164-13-32","volume":"13","author":"MW Allard","year":"2012","unstructured":"Allard MW, Luo Y, Strain E, Li C, Keys CE, Son I, Stones R, Musser SM, Brown EW: High resolution clustering of Salmonella enterica serovar Montevideo strains using a next-generation sequencing approach. BMC Genomics. 2012, 13: 32. doi:10.1186\/1471-2164-13-32","journal-title":"BMC Genomics"},{"key":"309_CR15","doi-asserted-by":"publisher","first-page":"e55254","DOI":"10.1371\/journal.pone.0055254","volume":"8","author":"MW Allard","year":"2013","unstructured":"Allard MW, Luo Y, Strain E, Pettengill J, Timme R, Wang C, Li C, Keys CE, Zheng J, Stones R, Wilson MR, Musser SM, Brown EW: On the evolutionary history, population genetics and diversity among isolates of Salmonella Enteritidis PFGE pattern JEGX01.0004. PLoS ONE. 2013, 8: e55254. doi:10.1371\/journal.pone.0055254","journal-title":"PLoS ONE"},{"key":"309_CR16","doi-asserted-by":"publisher","first-page":"e55687","DOI":"10.1371\/journal.pone.0055687","volume":"8","author":"G Cao","year":"2013","unstructured":"Cao G, Meng J, Strain E, Stones R, Pettengill J, Zhao S, McDermott P, Brown E, Allard M: Phylogenetics and differentiation of Salmonella Newport lineages by whole genome sequencing. PLoS One. 2013, 8: e55687. doi: 10.1371\/journal.pone.0055687","journal-title":"PLoS One"},{"key":"309_CR17","doi-asserted-by":"publisher","first-page":"20142","DOI":"10.1073\/pnas.1107176108","volume":"108","author":"M Eppinger","year":"2011","unstructured":"Eppinger M, Mammel MK, Leclerc JE, Ravel J, Cebula TA: Genomic anatomy of Escherichia coli O157:H7 outbreaks. Proc Natl Acad Sci U S A. 2011, 108: 20142-20147. 10.1073\/pnas.1107176108.","journal-title":"Proc Natl Acad Sci U S A"},{"key":"309_CR18","doi-asserted-by":"publisher","first-page":"4123","DOI":"10.1128\/JCM.02262-12","volume":"50","author":"W Ju","year":"2012","unstructured":"Ju W, Cao G, Rump L, Strain E, Luo Y, Timme R, Allard M, Zhao S, Brown E, Meng J: Phylogenetic analysis of non-O157 shiga toxin-producing Escherichia coli strains by whole-genome sequencing. J Clin Microbiol. 2012, 50: 4123-4127. 10.1128\/JCM.02262-12.","journal-title":"J Clin Microbiol"},{"key":"309_CR19","doi-asserted-by":"publisher","first-page":"688","DOI":"10.1186\/1471-2164-11-688","volume":"11","author":"HC den Bakker","year":"2010","unstructured":"den Bakker HC, Cummings CA, Ferreira V, Vatta P, Orsi RH, Degoricija L, Barker M, Petrauskene O, Furtado MR, Wiedmann M: Comparative genomics of the bacterial genus Listeria: genome evolution is characterized by limited gene acquisition and limited gene loss. BMC Genomics. 2010, 11: 688. doi: 10.1186\/1471-2164-11-688","journal-title":"BMC Genomics"},{"key":"309_CR20","doi-asserted-by":"publisher","first-page":"144","DOI":"10.1186\/1471-2164-13-144","volume":"13","author":"T Hain","year":"2012","unstructured":"Hain T, Ghai R, Billion A, Kuenne CT, Steinweg C, Izar B, Mohamed W, Mraheil MA, Domann E, Schaffrath S, K\u00e4rst U, Goesmann A, Oehm S, P\u00fchler A, Merkl R, Vorwerk S, Glaser P, Garrido P, Rusniok C, Buchrieser C, Goebel W, Chakraborty T: Comparative genomics and transcriptomics of lineage I, II, and III strains of Listeria monocytogenes. BMC Genomics. 2012, 13: 144. doi:10.1186\/1471-2164-13-144,","journal-title":"BMC Genomics"},{"key":"309_CR21","doi-asserted-by":"publisher","first-page":"47","DOI":"10.1186\/1471-2164-14-47","volume":"14","author":"C Kuenne","year":"2013","unstructured":"Kuenne C, Billion A, Mraheil MA, Strittmatter A, Daniel R, Goesmann A, Barbuddhe S, Hain T, Chakraborty T: Reassessment of the Listeria monocytogenes pan-genome reveals dynamic integration hotspots and mobile genetic elements as major components of the accessory genome. BMC Genomics. 2013, 14: 47. doi: 10.1186\/1471-2164-14-47","journal-title":"BMC Genomics"},{"key":"309_CR22","doi-asserted-by":"publisher","first-page":"285","DOI":"10.1016\/j.mimet.2012.05.023","volume":"90","author":"S Miya","year":"2012","unstructured":"Miya S, Takahashi H, Kamimura C, Nakagawa M, Kuda T, Kimura B: Highly discriminatory typing method for Listeria monocytogenes using polymorphic tandem repeat regions. J Microbiol Methods. 2012, 90: 285-291. 10.1016\/j.mimet.2012.05.023.","journal-title":"J Microbiol Methods"},{"key":"309_CR23","first-page":"5019","volume":"193","author":"J Chen","year":"2011","unstructured":"Chen J, Xia Y, Cheng C, Fang C, Shan Y, Jin G, Fang W: Genome sequence of the nonpathogenic Listeria monocytogenes serovar 4a strain M7. J Microbiol. 2011, 193: 5019-5020.","journal-title":"J Microbiol"},{"key":"309_CR24","doi-asserted-by":"publisher","first-page":"3552","DOI":"10.1128\/JB.00616-12","volume":"194","author":"PD McMullen","year":"2012","unstructured":"McMullen PD, Gillaspy AF, Gipson J, Bobo LD, Skiest DJ, Freitag NE: Genome sequence of Listeria monocytogenes 07PF0776, a cardiotropic serovar 4b strain. J Bacteriol. 2012, 194: 3552-10.1128\/JB.00616-12.","journal-title":"J Bacteriol"},{"key":"309_CR25","doi-asserted-by":"publisher","first-page":"2386","DOI":"10.1093\/nar\/gkh562","volume":"32","author":"KE Nelson","year":"2004","unstructured":"Nelson KE, Fouts DE, Mongodin EF, Ravel J, DeBoy RT, Kolonay JF, Rasko DA, Angiuoli SV, Gill SR, Beanan MJ, Brinkac LM, Daugherty SC, Dodson RJ, Durkin AS, Madupu R, Haft DH, Selengut J, Aken SV, Khouri H, Fedorova N, Forberger H, Tran B, Kathariou S, Wonderling LD, Uhlich GA, Bayles DO, Luchansky JB, Fraser CM: Whole genome comparisons of serotype 4b and 1\/2a strains of the food-borne pathogen Listeria monocytogenes reveal new insights into the core genome components of this species. Nucleic Acids Res. 2004, 32: 2386-2395. 10.1093\/nar\/gkh562.","journal-title":"Nucleic Acids Res"},{"key":"309_CR26","doi-asserted-by":"crossref","first-page":"849","DOI":"10.1126\/science.1063447","volume":"294","author":"P Glaser","year":"2001","unstructured":"Glaser P, Frangeul L, Buchrieser C, Rusniok C, Amend A, Baquero F, Berche P, Bloecker H, Brandt P, Chakraborty T, Charbit A, Chetouani F, Couv\u00e9 E, de Daruvar A, Dehoux P, Domann E, Dom\u00ednguez-Bernal G, Duchaud E, Durant L, Dussurget O, Entian K-D, Fishi H, Garcia-Del Porillo F, Garrido P, Gautier L, Goebel W, G\u00f3mez-L\u00f3pez N, Hain T, Hauf J, Jackson D: Comparative genomics of Listeria species. Science. 2001, 294: 849-852.","journal-title":"Science"},{"key":"309_CR27","doi-asserted-by":"publisher","first-page":"3679","DOI":"10.1128\/JB.05236-11","volume":"193","author":"CL Steele","year":"2011","unstructured":"Steele CL, Donaldson JR, Paul D, Banes MM, Arick T, Bridges SM, Lawrence ML: Genome sequence of lineage III Listeria monocytogenes strain HCC23. J Bacteriol. 2011, 193: 3679-3680. 10.1128\/JB.05236-11.","journal-title":"J Bacteriol"},{"key":"309_CR28","doi-asserted-by":"publisher","first-page":"120","DOI":"10.1186\/1471-2164-11-120","volume":"11","author":"MW Gilmour","year":"2010","unstructured":"Gilmour MW, Graham M, Domselaar GV, Tyler S, Kent H, Trout-Yakel KM, Larios O, Allen V, Lee B, Nadon C: High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak. BMC Genomics. 2010, 11: 120. doi:10.1186\/1471-2164-11-120","journal-title":"BMC Genomics"},{"key":"309_CR29","doi-asserted-by":"publisher","first-page":"e67511","DOI":"10.1371\/journal.pone.0067511","volume":"8","author":"HC den Bakker","year":"2013","unstructured":"den Bakker HC, Desjardins CA, Griggs AD, Peters JE, Zeng Q, Young SK, Kodira CD, Yandava C, Hepburn TA, Haas BJ, Birren BW, Wiedmann M: Evolutionary dynamics of the accessory genome of Listeria monocytogenes. PLoS One. 2013, 8: e67511. doi:10.1371\/journal.pone.0067511,","journal-title":"PLoS One"},{"key":"309_CR30","doi-asserted-by":"publisher","first-page":"3279","DOI":"10.1128\/AEM.00546-11","volume":"77","author":"B Verghese","year":"2011","unstructured":"Verghese B, Lok M, Wen J, Alessandria V, Chen Y, Kathriou S, Knabel S:comK prophage junction fragments as markers for Listeria monocytogenes genotypes unique to individual meat and poultry processing plants and a model for rapid niche-specific adaptation, biofilm formation, and persistence. Appl Environ Microbiol. 2011, 77: 3279-3292. 10.1128\/AEM.00546-11.","journal-title":"Appl Environ Microbiol"},{"key":"309_CR31","doi-asserted-by":"publisher","first-page":"556","DOI":"10.1128\/JB.188.2.556-568.2006","volume":"188","author":"B Joseph","year":"2006","unstructured":"Joseph B, Przybilla K, St\u00fchler C, Schauer K, Slaghuis J, Fuchs TM, Goebel W: Identification of Listeria monocytogenes genes contributing to intracellular replication by expression profiling and mutant screening. J Bacteriol. 2006, 188: 556-568. 10.1128\/JB.188.2.556-568.2006.","journal-title":"J Bacteriol"},{"key":"309_CR32","doi-asserted-by":"publisher","first-page":"91","DOI":"10.1128\/JB.01202-08","volume":"191","author":"M Deloger","year":"2009","unstructured":"Deloger M, Karouri ME, Petit M-A: A genomic distance based on MUM indicates discontinuity between most bacterial species and genera. J Bacteriol. 2009, 191: 91-99. 10.1128\/JB.01202-08.","journal-title":"J Bacteriol"},{"key":"309_CR33","doi-asserted-by":"publisher","first-page":"913","DOI":"10.1128\/AEM.70.2.913-920.2004","volume":"70","author":"W Zhang","year":"2004","unstructured":"Zhang W, Jayarao BM, Knabel SJ: Multi-virulence-locus sequence typing of Listeria monocytogenes. Appl Environ Microbiol. 2004, 70: 913-920. 10.1128\/AEM.70.2.913-920.2004.","journal-title":"Appl Environ Microbiol"},{"key":"309_CR34","doi-asserted-by":"publisher","first-page":"3398","DOI":"10.1128\/AEM.02373-09","volume":"76","author":"MB Cooley","year":"2010","unstructured":"Cooley MB, Carychao D, Nguyen K, Whitehand L, Mandrell R: Effects of environmental stress on stability of tandem repeats in Escherichia coli O157:H7. Appl Eniviron Microbiol. 2010, 76: 3398-3400. 10.1128\/AEM.02373-09.","journal-title":"Appl Eniviron Microbiol"},{"key":"309_CR35","doi-asserted-by":"publisher","first-page":"e30823","DOI":"10.1371\/journal.pone.0030823","volume":"7","author":"K Garc\u00eda","year":"2012","unstructured":"Garc\u00eda K, Gavil\u00e1n RG, H\u00f6fle MG, Mart\u00ednez-Urtaza J, Espejo RT: Microevolution of pandemic Vibrio parahaemolyticus assessed by the number of repeat units in short sequence tandem repeat regions. PLoS ONE. 2012, 7: e30823. doi:10.1371\/journal.pone.0030823","journal-title":"PLoS ONE"},{"key":"309_CR36","doi-asserted-by":"publisher","first-page":"189","DOI":"10.1016\/j.ijfoodmicro.2005.02.009","volume":"104","author":"SI Makino","year":"2005","unstructured":"Makino SI, Kawamoto K, Takeshi K, Okada Y, Yamasaki M, Yamamoto S, Igimi S: An outbreak of food-borne listeriosis due to cheese in Japan, during 2001. Int J Food Microbiol. 2005, 104: 189-196. 10.1016\/j.ijfoodmicro.2005.02.009.","journal-title":"Int J Food Microbiol"},{"key":"309_CR37","doi-asserted-by":"publisher","first-page":"769","DOI":"10.1017\/S0950268804001967","volume":"132","author":"A Okutani","year":"2004","unstructured":"Okutani A, Okada Y, Yamamoto S, Igimi S: Nationwide survey of human Listeria monocytogenes infection in Japan. Epidemiol Infect. 2004, 132: 769-772. 10.1017\/S0950268804001967.","journal-title":"Epidemiol Infect"},{"key":"309_CR38","doi-asserted-by":"publisher","first-page":"1","DOI":"10.3201\/eid1901.120393","volume":"19","author":"EJ Cartwright","year":"2013","unstructured":"Cartwright EJ, Jackson KA, Johnson SD, Graves LM, Silk BJ, Mahon BE: Listeriosis outbreaks and associated food vehicles, United States, 1998\u20132008. Emerging Infect Dis. 2013, 19: 1-9. doi:10.3201\/eid1901.120393","journal-title":"Emerging Infect Dis"},{"key":"309_CR39","unstructured":"Eurosurveillance Editorial Team: The European Union summary report on trends and sources of zoonoses, zoonotic agents and food-borne outbreaks in 2010.Euro Surveill, 17. Available online: [http:\/\/www.eurosurveillance.org\/ViewArticle.aspx?ArticleId=20113],"},{"key":"309_CR40","doi-asserted-by":"publisher","first-page":"24","DOI":"10.1016\/j.ijfoodmicro.2012.09.010","volume":"160","author":"ST Lambertz","year":"2012","unstructured":"Lambertz ST, Nilsson C, Br\u00e5denmark A, Sylv\u00e9n S, Johansson A, Jansson LM, Lindblad M: Prevalence and level of Listeria monocytogenes in ready-to-eat foods in Sweden 2010. Int J Food Microbiol. 2012, 160: 24-33. 10.1016\/j.ijfoodmicro.2012.09.010.","journal-title":"Int J Food Microbiol"},{"key":"309_CR41","doi-asserted-by":"publisher","first-page":"131","DOI":"10.1016\/j.ijfoodmicro.2003.11.014","volume":"93","author":"A Okutani","year":"2004","unstructured":"Okutani A, Okada Y, Yamamoto S, Igimi S: Overview of Listeria monocytogenes contamination in Japan. Int J Food Microbiol. 2004, 93: 131-140. 10.1016\/j.ijfoodmicro.2003.11.014.","journal-title":"Int J Food Microbiol"},{"key":"309_CR42","doi-asserted-by":"publisher","first-page":"M212","DOI":"10.1111\/j.1750-3841.2011.02596.x","volume":"77","author":"P Wang","year":"2012","unstructured":"Wang P, Yang H, Hu Y, Yuan F, Zhao G, Zhao Y, Chen Y: Characterization of Listeria monocytogenes isolates in import food products of China from 8 provinces between 2005 and 2007. J Food Sci. 2012, 77: M212-M216. doi:10.1111\/j.1750-3841.2011.02596.x","journal-title":"J Food Sci"},{"key":"309_CR43","volume-title":"Molecular Cloning: A Laboratory Manual","author":"J Sambrook","year":"1989","unstructured":"Sambrook J, Fritsch EF, Maniatis T: Molecular Cloning: A Laboratory Manual. 1989, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, 2","edition":"2"},{"key":"309_CR44","doi-asserted-by":"publisher","first-page":"274","DOI":"10.1016\/j.ijfoodmicro.2007.07.047","volume":"118","author":"H Takahashi","year":"2007","unstructured":"Takahashi H, Handa-Miya S, Kimura B, Sato M, Yokoi A, Goto S, Watanabe I, Koda T, Hisa K, Fujii T: Development of multilocus single strand conformation polymorphism (MLSSCP) analysis of virulence genes of Listeria monocytogenes and comparison with existing DNA typing methods. Int J Food Microbiol. 2007, 118: 274-284. 10.1016\/j.ijfoodmicro.2007.07.047.","journal-title":"Int J Food Microbiol"},{"key":"309_CR45","doi-asserted-by":"publisher","first-page":"1394","DOI":"10.1101\/gr.2289704","volume":"14","author":"ACE Darling","year":"2004","unstructured":"Darling ACE, Mau B, Blatter FR, Perna NT: Mauve: multiple alignment of conserved genomic sequence with rearrangements. Genome Res. 2004, 14: 1394-1403. 10.1101\/gr.2289704.","journal-title":"Genome Res"},{"key":"309_CR46","doi-asserted-by":"publisher","first-page":"673","DOI":"10.1093\/bioinformatics\/btm009","volume":"23","author":"AL Delcher","year":"2007","unstructured":"Delcher AL, Bratke KA, Powers EC, Salzberg SL: Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics. 2007, 23: 673-679. 10.1093\/bioinformatics\/btm009.","journal-title":"Bioinformatics"},{"key":"309_CR47","doi-asserted-by":"publisher","first-page":"e11147","DOI":"10.1371\/journal.pone.0011147","volume":"5","author":"AE Darling","year":"2010","unstructured":"Darling AE, Mau B, Perna NT: progressiveMauve: multiple genome alignment with gene gain, loss and rearrangement. PLoS One. 2010, 5: e11147. doi:10.1371\/journal.pone.0011147","journal-title":"PLoS One"},{"key":"309_CR48","doi-asserted-by":"publisher","first-page":"1251","DOI":"10.1534\/genetics.106.063305","volume":"175","author":"X Didelot","year":"2007","unstructured":"Didelot X, Falush D: Inference of bacterial microevolution using multilocus sequence data. Genetics. 2007, 175: 1251-1266. 10.1534\/genetics.106.063305.","journal-title":"Genetics"},{"key":"309_CR49","doi-asserted-by":"publisher","first-page":"R12","DOI":"10.1186\/gb-2004-5-2-r12","volume":"5","author":"S Kurtz","year":"2004","unstructured":"Kurtz S, Phillippy A, Delcher AL, Smoot M, Shumway M, Antonescu C, Salzberg SL: Versatile and open software for comparing large genomes. Genome Biol. 2004, 5: R12. doi:10.1186\/gb-2004-5-2-r12","journal-title":"Genome Biol"}],"container-title":["BMC Microbiology"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/article\/10.1186\/s12866-014-0309-0\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s12866-014-0309-0.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s12866-014-0309-0","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1186\/s12866-014-0309-0.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,4,24]],"date-time":"2022-04-24T03:41:25Z","timestamp":1650771685000},"score":1,"resource":{"primary":{"URL":"https:\/\/bmcmicrobiol.biomedcentral.com\/articles\/10.1186\/s12866-014-0309-0"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2014,12]]},"references-count":49,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2014,12]]}},"alternative-id":["309"],"URL":"https:\/\/doi.org\/10.1186\/s12866-014-0309-0","relation":{},"ISSN":["1471-2180"],"issn-type":[{"value":"1471-2180","type":"electronic"}],"subject":[],"published":{"date-parts":[[2014,12]]},"assertion":[{"value":"10 September 2014","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"24 November 2014","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"10 December 2014","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}}],"article-number":"309"}}