{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,5,30]],"date-time":"2025-05-30T02:26:08Z","timestamp":1748571968483,"version":"3.37.3"},"reference-count":49,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2018,9,10]],"date-time":"2018-09-10T00:00:00Z","timestamp":1536537600000},"content-version":"tdm","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0\/"}],"funder":[{"DOI":"10.13039\/501100001809","name":"National Nature Science Foundation of China","doi-asserted-by":"crossref","award":["31272470"],"award-info":[{"award-number":["31272470"]}],"id":[{"id":"10.13039\/501100001809","id-type":"DOI","asserted-by":"crossref"}]}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["BMC Microbiol"],"published-print":{"date-parts":[[2018,12]]},"DOI":"10.1186\/s12866-018-1253-1","type":"journal-article","created":{"date-parts":[[2018,9,10]],"date-time":"2018-09-10T09:20:41Z","timestamp":1536571241000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":5,"title":["Chronic dexamethasone exposure retards growth without altering the digestive tract microbiota composition in goats"],"prefix":"10.1186","volume":"18","author":[{"given":"Canfeng","family":"Hua","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Yali","family":"Geng","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Qu","family":"Chen","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Liqiong","family":"Niu","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Liuping","family":"Cai","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Shiyu","family":"Tao","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"ORCID":"https:\/\/orcid.org\/0000-0003-1147-3631","authenticated-orcid":false,"given":"Yingdong","family":"Ni","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Ruqian","family":"Zhao","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2018,9,10]]},"reference":[{"key":"1253_CR1","doi-asserted-by":"publisher","first-page":"1):1","DOI":"10.1016\/S0301-6226(00)00162-7","volume":"67","author":"N Silanikove","year":"2000","unstructured":"Silanikove N. Effects of heat stress on the welfare of extensively managed domestic ruminants. Livest Prod Sci. 2000;67:1):1\u201318.","journal-title":"Livest Prod Sci"},{"issue":"4239","key":"1253_CR2","doi-asserted-by":"publisher","first-page":"565","DOI":"10.1126\/science.1257793","volume":"192","author":"L Terry","year":"1976","unstructured":"Terry L, Willoughby J, Braseau P, Martin J, Patel Y. Antiserum to somatostatin prevents stress-induced inhibition of growth hormone secretion in the rat. Science. 1976;192(4239):565\u20137.","journal-title":"Science"},{"issue":"5","key":"1253_CR3","doi-asserted-by":"publisher","first-page":"468","DOI":"10.3109\/10253890.2011.606341","volume":"14","author":"KL Tamashiro","year":"2011","unstructured":"Tamashiro KL, Sakai RR, Shively CA, Karatsoreos IN, Reagan LP. Chronic stress, metabolism, and metabolic syndrome. Stress. 2011;14(5):468\u201374.","journal-title":"Stress"},{"issue":"9206","key":"1253_CR4","doi-asserted-by":"publisher","first-page":"773","DOI":"10.1016\/S0140-6736(99)08415-9","volume":"355","author":"SE Capes","year":"2000","unstructured":"Capes SE, Hunt D, Malmberg K, Gerstein HC. Stress hyperglycaemia and increased risk of death after myocardial infarction in patients with and without diabetes: a systematic overview. Lancet. 2000;355(9206):773\u20138.","journal-title":"Lancet"},{"issue":"4","key":"1253_CR5","doi-asserted-by":"publisher","first-page":"910","DOI":"10.1097\/00003246-200104000-00052","volume":"29","author":"G Van den Berghe","year":"2001","unstructured":"Van den Berghe G. Molecular biology: a timely tool for further unraveling the \u201cdiabetes of stress\u201d. Crit Care Med. 2001;29(4):910\u20131.","journal-title":"Crit Care Med"},{"issue":"5","key":"1253_CR6","doi-asserted-by":"publisher","first-page":"1058","DOI":"10.1097\/01.TA.0000123267.39011.9F","volume":"56","author":"AM Laird","year":"2004","unstructured":"Laird AM, Miller PR, Kilgo PD, Meredith JW, Chang MC. Relationship of early hyperglycemia to mortality in trauma patients. J Trauma Acute Care Surg. 2004;56(5):1058\u201362.","journal-title":"J Trauma Acute Care Surg"},{"issue":"10","key":"1253_CR7","doi-asserted-by":"publisher","first-page":"2426","DOI":"10.1161\/hs1001.096194","volume":"32","author":"SE Capes","year":"2001","unstructured":"Capes SE, Hunt D, Malmberg K, Pathak P, Gerstein HC. Stress hyperglycemia and prognosis of stroke in nondiabetic and diabetic patients. Stroke. 2001;32(10):2426\u201332.","journal-title":"Stroke"},{"issue":"1","key":"1253_CR8","doi-asserted-by":"publisher","first-page":"79","DOI":"10.1016\/j.mce.2013.03.003","volume":"380","author":"T Kuo","year":"2013","unstructured":"Kuo T, Harris CA, Wang J-C. Metabolic functions of glucocorticoid receptor in skeletal muscle. Mol Cell Endocrinol. 2013;380(1):79\u201388.","journal-title":"Mol Cell Endocrinol"},{"issue":"4","key":"1253_CR9","doi-asserted-by":"publisher","first-page":"231","DOI":"10.1186\/cc9100","volume":"14","author":"M-R Losser","year":"2010","unstructured":"Losser M-R, Damoisel C, Payen D. Bench-to-bedside review: glucose and stress conditions in the intensive care unit. Crit Care. 2010;14(4):231.","journal-title":"Crit Care"},{"issue":"7","key":"1253_CR10","doi-asserted-by":"publisher","first-page":"1248","DOI":"10.1017\/S1751731110000674","volume":"4","author":"P Freestone","year":"2010","unstructured":"Freestone P, Lyte M. Stress and microbial endocrinology: prospects for ruminant nutrition. Animal. 2010;4(7):1248\u201357.","journal-title":"Animal"},{"issue":"3","key":"1253_CR11","doi-asserted-by":"publisher","first-page":"255","DOI":"10.1016\/S0921-4488(00)00152-8","volume":"38","author":"A Shamay","year":"2000","unstructured":"Shamay A, Mabjeesh S, Shapiro F, Silanikove N. Adrenocorticotrophic hormone and dexamethasone failed to affect milk yield in dairy goats: comparative aspects. Small Rumin Res. 2000;38(3):255\u20139.","journal-title":"Small Rumin Res"},{"issue":"44","key":"1253_CR12","doi-asserted-by":"publisher","first-page":"15718","DOI":"10.1073\/pnas.0407076101","volume":"101","author":"F B\u00e4ckhed","year":"2004","unstructured":"B\u00e4ckhed F, Ding H, Wang T, Hooper LV, Koh GY, Nagy A, Semenkovich CF, Gordon JI. The gut microbiota as an environmental factor that regulates fat storage. Proc Natl Acad Sci U S A. 2004;101(44):15718\u201323.","journal-title":"Proc Natl Acad Sci U S A"},{"issue":"31","key":"1253_CR13","doi-asserted-by":"publisher","first-page":"11070","DOI":"10.1073\/pnas.0504978102","volume":"102","author":"RE Ley","year":"2005","unstructured":"Ley RE, B\u00e4ckhed F, Turnbaugh P, Lozupone CA, Knight RD, Gordon JI. Obesity alters gut microbial ecology. Proc Natl Acad Sci U S A. 2005;102(31):11070\u20135.","journal-title":"Proc Natl Acad Sci U S A"},{"issue":"7","key":"1253_CR14","doi-asserted-by":"publisher","first-page":"688","DOI":"10.1038\/sj.embor.7400731","volume":"7","author":"AM O'Hara","year":"2006","unstructured":"O'Hara AM, Shanahan F. The gut flora as a forgotten organ. EMBO Rep. 2006;7(7):688\u201393.","journal-title":"EMBO Rep"},{"issue":"3","key":"1253_CR15","doi-asserted-by":"publisher","first-page":"397","DOI":"10.1016\/j.bbi.2010.10.023","volume":"25","author":"MT Bailey","year":"2011","unstructured":"Bailey MT, Dowd SE, Galley JD, Hufnagle AR, Allen RG, Lyte M. Exposure to a social stressor alters the structure of the intestinal microbiota: implications for stressor-induced immunomodulation. Brain Behav Immun. 2011;25(3):397\u2013407.","journal-title":"Brain Behav Immun"},{"issue":"4","key":"1253_CR16","doi-asserted-by":"publisher","first-page":"1509","DOI":"10.1128\/IAI.00862-09","volume":"78","author":"MT Bailey","year":"2010","unstructured":"Bailey MT, Dowd SE, Parry NM, Galley JD, Schauer DB, Lyte M. Stressor exposure disrupts commensal microbial populations in the intestines and leads to increased colonization by Citrobacter rodentium. Infect Immun. 2010;78(4):1509\u201319.","journal-title":"Infect Immun"},{"issue":"4","key":"1253_CR17","doi-asserted-by":"publisher","first-page":"1099","DOI":"10.1053\/gast.2002.36019","volume":"123","author":"JD S\u00f6derholm","year":"2002","unstructured":"S\u00f6derholm JD, Yang PC, Ceponis P, Vohra A, Riddell R, Sherman PM, Perdue MH. Chronic stress induces mast cell\u2013dependent bacterial adherence and initiates mucosal inflammation in rat intestine. Gastroenterology. 2002;123(4):1099\u2013108.","journal-title":"Gastroenterology"},{"key":"1253_CR18","doi-asserted-by":"publisher","DOI":"10.1016\/j.bbi.2015.06.135","volume":"49","author":"AR Albor","year":"2015","unstructured":"Albor AR, Mart\u00ednez-Becerril E, Arciniega-Mart\u00ednez I, Salas-Pimentel M, Garc\u00eda-Fonseca A, Campos-Rodr\u00edguez R. Effect of acute stress on B cells and IgA production of large intestine. Brain Behav Immun. 2015;49:e35.","journal-title":"Brain Behav Immun"},{"issue":"1","key":"1253_CR19","doi-asserted-by":"publisher","first-page":"64","DOI":"10.1186\/s40168-017-0281-7","volume":"5","author":"SD Pitlik","year":"2017","unstructured":"Pitlik SD, Koren O. How holobionts get sick-toward a unifying scheme of disease. Microbiome. 2017;5(1):64.","journal-title":"Microbiome"},{"key":"1253_CR20","volume-title":"Greenhouse gas emissions from ruminant supply chains\u2013a global life cycle assessment","author":"C Opio","year":"2013","unstructured":"Opio C, Gerber P, Mottet A, Falcucci A, Tempio G, MacLeod M, Vellinga T, Henderson B, Steinfeld H. Greenhouse gas emissions from ruminant supply chains\u2013a global life cycle assessment. Rome: Food and agriculture organization of the United Nations (FAO); 2013."},{"issue":"5","key":"1253_CR21","doi-asserted-by":"publisher","first-page":"285","DOI":"10.1111\/j.1758-2229.2009.00038.x","volume":"1","author":"R Conrad","year":"2009","unstructured":"Conrad R. The global methane cycle: recent advances in understanding the microbial processes involved. Environ Microbiol Rep. 2009;1(5):285\u201392.","journal-title":"Environ Microbiol Rep"},{"key":"1253_CR22","doi-asserted-by":"crossref","unstructured":"Kurilshikov A, Wijmenga C, Fu J, Zhernakova A. Host genetics and gut microbiome: challenges and perspectives. Trends Immunol. 2017;","DOI":"10.1016\/j.it.2017.06.003"},{"issue":"7","key":"1253_CR23","doi-asserted-by":"publisher","first-page":"399","DOI":"10.1023\/A:1006365324335","volume":"23","author":"B Anderson","year":"1999","unstructured":"Anderson B, Watson D, Colditz I. The effect of dexamethasone on some immunological parameters in cattle. Vet Res Commun. 1999;23(7):399\u2013413.","journal-title":"Vet Res Commun"},{"issue":"1","key":"1253_CR24","doi-asserted-by":"publisher","first-page":"64","DOI":"10.1016\/j.ejphar.2007.11.029","volume":"581","author":"JW Jahng","year":"2008","unstructured":"Jahng JW, Kim NY, Ryu V, Yoo SB, Kim B-T, Kang D-W, Lee J-H. Dexamethasone reduces food intake, weight gain and the hypothalamic 5-HT concentration and increases plasma leptin in rats. Eur J Pharmacol. 2008;581(1):64\u201370.","journal-title":"Eur J Pharmacol"},{"issue":"1","key":"1253_CR25","doi-asserted-by":"publisher","first-page":"29","DOI":"10.1016\/0031-9384(87)90181-8","volume":"40","author":"P Alario","year":"1987","unstructured":"Alario P, Gamallo A, Beato M, Trancho G. Body weight gain, food intake and adrenal development in chronic noise stressed rats. Physiol Behav. 1987;40(1):29\u201332.","journal-title":"Physiol Behav"},{"key":"1253_CR26","doi-asserted-by":"crossref","unstructured":"Hua C, Tian J, Tian P, Cong R, Luo Y, Geng Y, Tao S, Ni Y, Zhao R. Feeding a high concentration diet induces unhealthy alterations in the composition and metabolism of ruminal microbiota and host response in a goat model. Front Microbiol. 2017;8","DOI":"10.3389\/fmicb.2017.00138"},{"issue":"1","key":"1253_CR27","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1016\/S0739-7240(02)00183-2","volume":"24","author":"J Cartmill","year":"2003","unstructured":"Cartmill J, Thompson D, Gentry L, Pruett H, Johnson C. Effects of dexamethasone, glucose infusion, adrenocorticotropin, and propylthiouracil on plasma leptin concentrations in horses. Domest Anim Endocrinol. 2003;24(1):1\u201314.","journal-title":"Domest Anim Endocrinol"},{"key":"1253_CR28","doi-asserted-by":"publisher","first-page":"217","DOI":"10.1016\/j.psyneuen.2015.10.001","volume":"63","author":"A Bharwani","year":"2016","unstructured":"Bharwani A, Mian MF, Foster JA, Surette MG, Bienenstock J, Forsythe P. Structural & functional consequences of chronic psychosocial stress on the microbiome & host. Psychoneuroendocrinology. 2016;63:217\u201327.","journal-title":"Psychoneuroendocrinology"},{"issue":"6","key":"1253_CR29","doi-asserted-by":"publisher","first-page":"971","DOI":"10.1016\/j.cmet.2015.10.001","volume":"22","author":"P Kovatcheva-Datchary","year":"2015","unstructured":"Kovatcheva-Datchary P, Nilsson A, Akrami R, Lee YS, De Vadder F, Arora T, Hallen A, Martens E, Bj\u00f6rck I, B\u00e4ckhed F. Dietary fiber-induced improvement in glucose metabolism is associated with increased abundance of Prevotella. Cell Metab. 2015;22(6):971\u201382.","journal-title":"Cell Metab"},{"issue":"1","key":"1253_CR30","doi-asserted-by":"publisher","first-page":"144","DOI":"10.1099\/ijs.0.026989-0","volume":"62","author":"M Morotomi","year":"2012","unstructured":"Morotomi M, Nagai F, Watanabe Y. Description of Christensenella minuta gen. Nov., sp. nov., isolated from human faeces, which forms a distinct branch in the order Clostridiales, and proposal of Christensenellaceae fam. Nov. Int J Syst Evol Microbiol. 2012;62(1):144\u20139.","journal-title":"Int J Syst Evol Microbiol"},{"key":"1253_CR31","doi-asserted-by":"publisher","first-page":"124","DOI":"10.1016\/j.anaerobe.2017.03.007","volume":"44","author":"BL Alonso","year":"2017","unstructured":"Alonso BL, von Sierakowski AI, Nieto JAS, Rosel AB. First report of human infection by Christensenella minuta, a gram-negative, strickly anaerobic rod that inhabits the human intestine. Anaerobe. 2017;44:124\u20135.","journal-title":"Anaerobe"},{"issue":"3","key":"1253_CR32","doi-asserted-by":"publisher","first-page":"114","DOI":"10.7841\/ksbbj.2015.30.3.114","volume":"30","author":"IH Kim","year":"2015","unstructured":"Kim IH, Choi J-H, Joo JO, Oh B-K. Development of microbe carrier for bioremediation of Zn, as by using Desulfovibrio Desulfuricans and zeolite in Artificial Sea water. KSBB Journal. 2015;30(3):114\u20138.","journal-title":"KSBB Journal"},{"key":"1253_CR33","doi-asserted-by":"crossref","unstructured":"Liu J-h, G-r B, W-y Z, S-y M. High-grain feeding causes strong shifts in ruminal epithelial bacterial community and expression of toll-like receptor genes in goats. Front Microbiol. 2015;6","DOI":"10.3389\/fmicb.2015.00167"},{"issue":"1","key":"1253_CR34","doi-asserted-by":"publisher","first-page":"42","DOI":"10.1186\/2040-2392-4-42","volume":"4","author":"L Wang","year":"2013","unstructured":"Wang L, Christophersen CT, Sorich MJ, Gerber JP, Angley MT, Conlon MA. Increased abundance of Sutterella spp. and Ruminococcus torques in feces of children with autism spectrum disorder. Molecular autism. 2013;4(1):42.","journal-title":"Molecular autism"},{"issue":"4","key":"1253_CR35","doi-asserted-by":"publisher","first-page":"529","DOI":"10.1078\/072320203770865837","volume":"26","author":"M Schmid","year":"2003","unstructured":"Schmid M, Walsh K, Webb R, Rijpstra WI, Van de pas-Schoonen K, Verbruggen MJ, hill T, Moffett B, Fuerst J, Schouten S. Candidatus \u201cScalindua brodae\u201d, sp. nov., Candidatus \u201cScalindua wagneri\u201d, sp. nov., two new species of anaerobic ammonium oxidizing bacteria. Syst Appl Microbiol. 2003;26(4):529\u201338.","journal-title":"Syst Appl Microbiol"},{"issue":"2","key":"1253_CR36","doi-asserted-by":"publisher","first-page":"e145","DOI":"10.1016\/j.jss.2011.04.003","volume":"169","author":"M Scarpa","year":"2011","unstructured":"Scarpa M, Grillo A, Pozza A, Faggian D, Ruffolo C, Scarpa M, D\u2019Inc\u00e0 R, Plebani M, Sturniolo GC, Castagliuolo I. TLR2 and TLR4 Up-regulation and Colonization of the Ileal Mucosa by Clostridiaceae spp. in Chronic\/Relapsing Pouchitis 1, 2. J Surg Res. 2011;169(2):e145\u201354.","journal-title":"J Surg Res"},{"issue":"12","key":"1253_CR37","doi-asserted-by":"publisher","first-page":"744","DOI":"10.1038\/nrmicro.2016.141","volume":"14","author":"JD Radolf","year":"2016","unstructured":"Radolf JD, Deka RK, Anand A, \u0160majs D, Norgard MV, Yang XF. Treponema pallidum, the syphilis spirochete: making a living as a stealth pathogen. Nat Rev Microbiol. 2016;14(12):744\u201359.","journal-title":"Nat Rev Microbiol"},{"key":"1253_CR38","first-page":"429","volume":"8","author":"J Liu","year":"2017","unstructured":"Liu J, Bian G, Sun D, Zhu W, Mao S. Starter feeding supplementation alters colonic mucosal bacterial communities and modulates mucosal immune homeostasis in newborn lambs. Front Microbiol. 2017;8:429.","journal-title":"Front Microbiol"},{"issue":"3","key":"1253_CR39","doi-asserted-by":"publisher","first-page":"528","DOI":"10.1111\/j.1574-6941.2008.00528.x","volume":"66","author":"T Sato","year":"2008","unstructured":"Sato T, Matsumoto K, Okumura T, Yokoi W, Naito E, Yoshida Y, Nomoto K, Ito M, Sawada H. Isolation of lactate-utilizing butyrate-producing bacteria from human feces and in vivo administration of Anaerostipes caccae strain L2 and galacto-oligosaccharides in a rat model. FEMS Microbiol Ecol. 2008;66(3):528\u201336.","journal-title":"FEMS Microbiol Ecol"},{"issue":"10","key":"1253_CR40","doi-asserted-by":"publisher","first-page":"4269","DOI":"10.1007\/s00253-017-8150-7","volume":"101","author":"EL Emerson","year":"2017","unstructured":"Emerson EL, Weimer PJ. Fermentation of model hemicelluloses by Prevotella strains and Butyrivibrio fibrisolvens in pure culture and in ruminal enrichment cultures. Appl Microbiol Biotechnol. 2017;101(10):4269\u201378.","journal-title":"Appl Microbiol Biotechnol"},{"issue":"2","key":"1253_CR41","first-page":"173","volume":"25","author":"i Robinson","year":"1975","unstructured":"Robinson i, Allison m, Hartman p. Anaeroplasma abactoclasticum gen. Nov., sp. nov.: an obligately anaerobic mycoplasma from the rumen. Int J Syst Evol Microbiol. 1975;25(2):173\u201381.","journal-title":"Int J Syst Evol Microbiol"},{"issue":"7","key":"1253_CR42","doi-asserted-by":"publisher","first-page":"1842","DOI":"10.1007\/s10620-007-0089-6","volume":"53","author":"H \u00dcnsal","year":"2008","unstructured":"\u00dcnsal H, Balkaya M, \u00dcnsal C, B\u0131y\u0131k H, Ba\u015fb\u00fclb\u00fcl G, Poyrazo\u011flu E. The short-term effects of different doses of dexamethasone on the numbers of some bacteria in the ileum. Dig Dis Sci. 2008;53(7):1842\u20135.","journal-title":"Dig Dis Sci"},{"issue":"9","key":"1253_CR43","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0007063","volume":"4","author":"B Dridi","year":"2009","unstructured":"Dridi B, Henry M, El Khechine A, Raoult D, Drancourt M. High prevalence of Methanobrevibacter smithii and Methanosphaera stadtmanae detected in the human gut using an improved DNA detection protocol. PLoS One. 2009;4(9):e7063.","journal-title":"PLoS One"},{"issue":"8","key":"1253_CR44","doi-asserted-by":"publisher","first-page":"497","DOI":"10.5455\/vetworld.2013.497-501","volume":"6","author":"B Obukowho Emikpe","year":"2013","unstructured":"Obukowho Emikpe B, Tanko PN, Mayowa Onilude O, Yussof Sabri M. The influence of dexamethasone treatment and successive road transport stress on the occurrence of caprine pneumonia in a hot humid tropical environment. Veterinary World. 2013;6(8):497\u2013501.","journal-title":"Veterinary World"},{"issue":"10","key":"1253_CR45","doi-asserted-by":"publisher","DOI":"10.1371\/journal.pone.0111596","volume":"9","author":"S Tao","year":"2014","unstructured":"Tao S, Duanmu Y, Dong H, Ni Y, Chen J, Shen X, Zhao R. High concentrate diet induced mucosal injuries by enhancing epithelial apoptosis and inflammatory response in the hindgut of goats. PLoS One. 2014;9(10):e111596.","journal-title":"PLoS One"},{"key":"1253_CR46","doi-asserted-by":"publisher","first-page":"237","DOI":"10.1186\/1746-6148-8-237","volume":"8","author":"S Mao","year":"2012","unstructured":"Mao S, Zhang R, Wang D, Zhu W. The diversity of the fecal bacterial community and its relationship with the concentration of volatile fatty acids in the feces during subacute rumen acidosis in dairy cows. BMC Vet Res. 2012;8:237.","journal-title":"BMC Vet Res"},{"issue":"1","key":"1253_CR47","doi-asserted-by":"publisher","first-page":"64","DOI":"10.3168\/jds.S0022-0302(80)82888-8","volume":"63","author":"G Broderick","year":"1980","unstructured":"Broderick G, Kang J. Automated simultaneous determination of ammonia and total amino acids in ruminal fluid and in vitro media1. J Dairy Sci. 1980;63(1):64\u201375.","journal-title":"J Dairy Sci"},{"issue":"33","key":"1253_CR48","doi-asserted-by":"publisher","first-page":"4135","DOI":"10.3748\/wjg.v16.i33.4135","volume":"16","author":"CW Nossa","year":"2010","unstructured":"Nossa CW, Oberdorf WE, Yang L, Aas JA, Paster BJ, DeSantis TZ, Brodie EL, Malamud D, Poles MA, Pei Z. Design of 16S rRNA gene primers for 454 pyrosequencing of the human foregut microbiome. World Journal of Gastroenterology : WJG. 2010;16(33):4135\u201344.","journal-title":"World Journal of Gastroenterology : WJG"},{"key":"1253_CR49","doi-asserted-by":"publisher","first-page":"3","DOI":"10.1038\/ismej.2007.90","volume":"2","author":"A Teske","year":"2007","unstructured":"Teske A, S\u00f8rensen KB. Uncultured archaea in deep marine subsurface sediments: have we caught them all? The Isme Journal. 2007;2:3.","journal-title":"The Isme Journal"}],"container-title":["BMC Microbiology"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s12866-018-1253-1.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1186\/s12866-018-1253-1\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s12866-018-1253-1.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2019,9,9]],"date-time":"2019-09-09T19:09:29Z","timestamp":1568056169000},"score":1,"resource":{"primary":{"URL":"https:\/\/bmcmicrobiol.biomedcentral.com\/articles\/10.1186\/s12866-018-1253-1"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2018,9,10]]},"references-count":49,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2018,12]]}},"alternative-id":["1253"],"URL":"https:\/\/doi.org\/10.1186\/s12866-018-1253-1","relation":{},"ISSN":["1471-2180"],"issn-type":[{"type":"electronic","value":"1471-2180"}],"subject":[],"published":{"date-parts":[[2018,9,10]]},"assertion":[{"value":"19 March 2018","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"28 August 2018","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"10 September 2018","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"Goats that were donors of rumen fluid were maintained according to the ethics committee and Institutional Animal Care and Use Committee standards for the Nanjing Agricultural University. Experiments were performed in accordance with the Regulations for the Administration of Affairs Concerning Experimental Animals (The State Science and Technology Commission of P. R. China, 1998).","order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Ethics approval and consent to participate"}},{"value":"Not applicable.","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"Consent for publication"}},{"value":"The authors declare that they have no competing interests.","order":3,"name":"Ethics","group":{"name":"EthicsHeading","label":"Competing interests"}},{"value":"Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.","order":4,"name":"Ethics","group":{"name":"EthicsHeading","label":"Publisher\u2019s Note"}}],"article-number":"112"}}