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The samples were analyzed by conventional bacteriological methods (ISO 6579:2002\/A1:2007) for isolation, and genus specific (<jats:italic>invA<\/jats:italic>) PCR for the identification of<jats:italic>Salmonella<\/jats:italic>spp. Then, two mPCR were set up to determine<jats:italic>Salmonella<\/jats:italic>serotypes and genotypic resistance status of the field isolates against ampicillin, tetracycline, trimethoprim-sulfamethoxazole and chloramphenicol antibiotics. In the PCR analysis of the suspected colonies, 98.5% were confirmed as<jats:italic>Salmonella<\/jats:italic>spp., and, the most prevalent serotype was identified as<jats:italic>S<\/jats:italic>. Infantis with the proportion of 26.6% (17\/64), followed by<jats:italic>S.<\/jats:italic>Enteritidis with 21.9% (14\/64) and<jats:italic>S.<\/jats:italic>Typhimurium with 9.4% (6\/64). The findings related to antibiotic resistance genes revealed that the most frequently determined gene was<jats:italic>sul1<\/jats:italic>with approximately 58%, while the<jats:italic>blaTEM<\/jats:italic>gene was detected at the lowest proportion with 20%, among<jats:italic>Salmonella<\/jats:italic>isolates.<\/jats:p><\/jats:sec><jats:sec><jats:title>Conclusions<\/jats:title><jats:p>The results indicated that<jats:italic>Salmonella<\/jats:italic>infections constitute a potential risk for chicken flocks in the country and that genotypic resistance rates against various antibiotics should draw particular attention in terms of both human and animal health.<\/jats:p><\/jats:sec>","DOI":"10.1186\/s12917-020-02425-0","type":"journal-article","created":{"date-parts":[[2020,6,19]],"date-time":"2020-06-19T11:03:52Z","timestamp":1592564632000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":29,"title":["Molecular identification and antibiotic resistance profiling of Salmonella species isolated from chickens in eastern Turkey"],"prefix":"10.1186","volume":"16","author":[{"given":"Aydogan","family":"Arkali","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"ORCID":"https:\/\/orcid.org\/0000-0001-6347-1684","authenticated-orcid":false,"given":"Burhan","family":"\u00c7etinkaya","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2020,6,19]]},"reference":[{"key":"2425_CR1","doi-asserted-by":"crossref","first-page":"245","DOI":"10.1079\/9780851992617.0245","volume-title":"Salmonella in domestic animals","author":"T Humphrey","year":"2000","unstructured":"Humphrey T. 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Appl Environ Microbiol. 2004;70:1\u20137.","journal-title":"Appl Environ Microbiol"}],"container-title":["BMC Veterinary Research"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1186\/s12917-020-02425-0.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/article\/10.1186\/s12917-020-02425-0\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1186\/s12917-020-02425-0.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,10,29]],"date-time":"2022-10-29T13:26:47Z","timestamp":1667050007000},"score":1,"resource":{"primary":{"URL":"https:\/\/bmcvetres.biomedcentral.com\/articles\/10.1186\/s12917-020-02425-0"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2020,6,19]]},"references-count":50,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2020,12]]}},"alternative-id":["2425"],"URL":"https:\/\/doi.org\/10.1186\/s12917-020-02425-0","relation":{},"ISSN":["1746-6148"],"issn-type":[{"value":"1746-6148","type":"electronic"}],"subject":[],"published":{"date-parts":[[2020,6,19]]},"assertion":[{"value":"14 February 2020","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"11 June 2020","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"19 June 2020","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"This study was approved by the local Ethics Committee of Firat University in the meeting dated 04.04.2018 with the decision number 2018\/06-73. The informed verbal consent was obtained from all participating farm owners prior to sample collection and this was approved by the ethics committee.","order":1,"name":"Ethics","group":{"name":"EthicsHeading","label":"Ethics approval and consent to participate"}},{"value":"Not applicable.","order":2,"name":"Ethics","group":{"name":"EthicsHeading","label":"Consent for publication"}},{"value":"The authors declare that they have no competing interests.","order":3,"name":"Ethics","group":{"name":"EthicsHeading","label":"Competing interests"}}],"article-number":"205"}}