{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2025,11,5]],"date-time":"2025-11-05T20:52:36Z","timestamp":1762375956611},"reference-count":26,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2015,4,22]],"date-time":"2015-04-22T00:00:00Z","timestamp":1429660800000},"content-version":"unspecified","delay-in-days":0,"URL":"http:\/\/creativecommons.org\/licenses\/by\/4.0"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Virol J"],"published-print":{"date-parts":[[2015,12]]},"DOI":"10.1186\/s12985-015-0287-3","type":"journal-article","created":{"date-parts":[[2015,4,20]],"date-time":"2015-04-20T23:37:19Z","timestamp":1429573039000},"update-policy":"http:\/\/dx.doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":18,"title":["Whole genome sequence comparison of ten diagnostic brucellaphages propagated on two Brucella abortus hosts"],"prefix":"10.1186","volume":"12","author":[{"given":"Ekaterine","family":"Tevdoradze","sequence":"first","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Jason","family":"Farlow","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Adam","family":"Kotorashvili","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Natia","family":"Skhirtladze","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Irina","family":"Antadze","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Sophio","family":"Gunia","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Nana","family":"Balarjishvili","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Leila","family":"Kvachadze","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]},{"given":"Mzia","family":"Kutateladze","sequence":"additional","affiliation":[],"role":[{"role":"author","vocabulary":"crossref"}]}],"member":"297","published-online":{"date-parts":[[2015,4,22]]},"reference":[{"key":"287_CR1","doi-asserted-by":"publisher","first-page":"e1865","DOI":"10.1371\/journal.pntd.0001865","volume":"6","author":"AS Dean","year":"2012","unstructured":"Dean AS, Crump L, Greter H, Schelling E, Zinsstag J. Global burden of human brucellosis: a systematic review of disease frequency. PLoSNegl Trop Dis. 2012;6:e1865.","journal-title":"PLoSNegl Trop Dis"},{"key":"287_CR2","unstructured":"Rosenberg E, Stackebrandt E, Thompson F, Lory S, DeLong E. The Prokaryotes - A Handbook on the Biology of Bacteria. Springer-Verlag New York, LLC 2006, Vol. 5: Proteobacteria: Alpha and Beta Subclasses. 3rd Edition."},{"key":"287_CR3","unstructured":"Corbel MJ, Thomas EL. The Brucella-Phages: Their Properties, Characterization and Applications. In: Booklet 2266, Ministry of Agriculture, Fisheries and Food, Pinner, Middlesex, UK. 1980."},{"issue":"8","key":"287_CR4","doi-asserted-by":"crossref","first-page":"1179","DOI":"10.1128\/am.16.8.1179-1190.1968","volume":"16","author":"LM Jones","year":"1968","unstructured":"Jones LM, Merz GS, Wilson JB. Phage typing reactions on brucella species. Appl Microbiol. 1968;16(8):1179\u201390.","journal-title":"Appl Microbiol"},{"issue":"2","key":"287_CR5","doi-asserted-by":"crossref","first-page":"324","DOI":"10.1128\/jb.83.2.324-329.1962","volume":"83","author":"CR McDuff","year":"1962","unstructured":"McDuff CR, Jones LM, Wilson JB. Characteristics of brucellaphage. J Bacteriol. 1962;83(2):324\u20139.","journal-title":"J Bacteriol"},{"issue":"5","key":"287_CR6","doi-asserted-by":"crossref","first-page":"736","DOI":"10.1128\/jb.78.5.736-737.1959","volume":"78","author":"WR Stinebring","year":"1959","unstructured":"Stinebring WR, Braun W. Brucellaphage. J Bacteriol. 1959;78(5):736\u20137.","journal-title":"J Bacteriol"},{"issue":"4","key":"287_CR7","doi-asserted-by":"publisher","first-page":"233","DOI":"10.1016\/j.ygeno.2012.01.001","volume":"99","author":"V Flores","year":"2012","unstructured":"Flores V, L\u00f3pez-Merino A, Mendoza-Hernandez G, Guarneros G. Comparative genomic analysis of two brucellaphages of distant origins. Genomics. 2012;99(4):233\u201340.","journal-title":"Genomics"},{"key":"287_CR8","doi-asserted-by":"crossref","unstructured":"Farlow J, Filippov AA, Sergueev KV, Hang J, and MP Nikolich. Comparative whole genome analysis of six diagnostic brucellaphages. Gene. 2014. doi:10.1016\/j.gene.2014.01.018.","DOI":"10.1016\/j.gene.2014.01.018"},{"key":"287_CR9","doi-asserted-by":"crossref","DOI":"10.5962\/bhl.title.6966","volume-title":"Bacteriophages","author":"MH Adams","year":"1959","unstructured":"Adams MH. Bacteriophages. New York: Interscience; 1959."},{"key":"287_CR10","first-page":"406","volume":"4","author":"N Saitou","year":"1987","unstructured":"Saitou N, Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol. 1987;4:406\u201325.","journal-title":"Mol Biol Evol"},{"key":"287_CR11","unstructured":"Drummond A, Kearse M, Heled J, Moir R, Thierer T, Ashton B, et al. Geneious v2.5. 2006. Available from http: \/\/www.geneious.com\/."},{"key":"287_CR12","doi-asserted-by":"publisher","first-page":"2731","DOI":"10.1093\/molbev\/msr121","volume":"28","author":"K Tamura","year":"2011","unstructured":"Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol. 2011;28:2731\u20139.","journal-title":"Mol Biol Evol"},{"key":"287_CR13","first-page":"418","volume":"3","author":"M Nei","year":"1968","unstructured":"Nei M, Gojobori T. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol Biol Evol. 1968;3:418\u201326.","journal-title":"Mol Biol Evol"},{"issue":"2","key":"287_CR14","doi-asserted-by":"publisher","first-page":"177","DOI":"10.1111\/j.1574-6968.1988.tb03173.x","volume":"56","author":"M Segondy","year":"1988","unstructured":"Segondy M, Allardet-Servent A, Caravano R, Ramuz M. Common physical map of four Brucella bacteriophage genomes. FEMS Microbiol Lett. 1988;56(2):177\u201382.","journal-title":"FEMS Microbiol Lett"},{"issue":"7","key":"287_CR15","doi-asserted-by":"publisher","first-page":"2999","DOI":"10.3390\/ijms10072999","volume":"10","author":"CZ Zhu","year":"2009","unstructured":"Zhu CZ, Xiong HY, Han J, Cui BY, Piao DR, Li YF, et al. Molecular characterization of Tb, a new approach for an ancient brucellaphage. Int J Mol Sci. 2009;10(7):2999\u20133011.","journal-title":"Int J Mol Sci"},{"key":"287_CR16","doi-asserted-by":"publisher","first-page":"292","DOI":"10.1099\/00207713-35-3-292","volume":"35","author":"JM Verger","year":"1985","unstructured":"Verger JM, Grimont F, Grimont PAD, Grayon M. Brucella, a monospecific genus as shown by deoxyribonucleic acid hybridization. Int J Syst Bacteriol. 1985;35:292\u20135.","journal-title":"Int J Syst Bacteriol"},{"issue":"138","key":"287_CR17","doi-asserted-by":"publisher","first-page":"235","DOI":"10.1016\/0769-2609(87)90199-2","volume":"1987","author":"JM Verger","year":"1987","unstructured":"Verger JM, Grimont F, Grimont PAD, Grayon M. Taxonomy of the genus Brucella. Ann Inst Pasteur Microbiol. 1987;1987(138):235\u20138.","journal-title":"Ann Inst Pasteur Microbiol"},{"key":"287_CR18","volume-title":"The Bacterial Chromosome","author":"S Casjens","year":"2005","unstructured":"Casjens S, Hendrix R. Bacteriophages and the bacterial genome. In: Higgins NP, editor. The Bacterial Chromosome. Washington DC: ASM Press; 2005."},{"key":"287_CR19","doi-asserted-by":"publisher","first-page":"2192","DOI":"10.1073\/pnas.96.5.2192","volume":"96","author":"RW Hendrix","year":"1999","unstructured":"Hendrix RW, Smith MC, Burns RN, Ford ME, Hatfull GF. Evolutionary relationships among diverse bacteriophages and prophages: all the world\u2019s a phage. Proc Natl Acad Sci USA. 1999;96:2192\u20137.","journal-title":"Proc Natl Acad Sci USA"},{"issue":"1","key":"287_CR20","first-page":"1","volume":"56","author":"MJ Corbel","year":"1975","unstructured":"Corbel MJ, Morris JA. Studies on a smooth phage resistant variant of Brucella abortus II. Mechanism of phage resistance. Br J Exp Pathol. 1975;56(1):1\u20137.","journal-title":"Br J Exp Pathol"},{"issue":"6","key":"287_CR21","doi-asserted-by":"crossref","first-page":"663","DOI":"10.1128\/jcm.5.6.663-664.1977","volume":"5","author":"R Harrington Jr","year":"1977","unstructured":"Harrington Jr R, Bond DR, Brown GM. Smooth phage-resistant Brucellaabortus from bovine tissue. J Clin Microbiol. 1977;5(6):663\u20134.","journal-title":"J Clin Microbiol"},{"key":"287_CR22","unstructured":"Kurtboke, Ipek. Bacteriophages. InTech, Rijeka, Croatia, 2012, ISBN 978-953-51-0272-4"},{"issue":"1","key":"287_CR23","doi-asserted-by":"publisher","first-page":"378","DOI":"10.1093\/nar\/gks1043","volume":"41","author":"SY Xu","year":"2013","unstructured":"Xu SY, Gupta YK. Natural zinc ribbon HNH endonucleases and engineered zinc finger nicking endonuclease. Nucleic Acids Res. 2013;41(1):378\u201390.","journal-title":"Nucleic Acids Res"},{"issue":"16","key":"287_CR24","doi-asserted-by":"publisher","first-page":"6022","DOI":"10.1073\/pnas.1320952111","volume":"11","author":"S Kala","year":"2014","unstructured":"Kala S, Cumby N, Sadowski PD, Hyder BZ, Kanelis V, Davidson AR, et al. HNH proteins are a widespread component of phage DNA packaging machines. Proc Natl Acad Sci. 2014;11(16):6022\u20137.","journal-title":"Proc Natl Acad Sci"},{"key":"287_CR25","doi-asserted-by":"publisher","first-page":"759","DOI":"10.1099\/00207713-48-3-759","volume":"48","author":"J Velasco","year":"1998","unstructured":"Velasco J, Romero C, Lopez-Goni I, Leiva J, Diaz R, Moriyon I. Evaluation of the relatedness of Brucella spp. and Ochrobactrumanthropiand description of Ochrobactrumintermedium sp. nov., a new species. Int J Syst Bacteriol. 1998;48:759\u201368.","journal-title":"Int J Syst Bacteriol"},{"issue":"1","key":"287_CR26","doi-asserted-by":"publisher","first-page":"115","DOI":"10.1111\/j.1574-6968.1993.tb06014.x","volume":"107","author":"M Yanagi","year":"1993","unstructured":"Yanagi M, Yamasato K. Phylogenetic analysis of the family Rhizobiaceae and related bacteria by sequencing of 16S rRNA gene using PCR and DNA sequencer. FEMS Micro Lett. 1993;107(1):115\u201320.","journal-title":"FEMS Micro Lett"}],"container-title":["Virology Journal"],"original-title":[],"language":"en","link":[{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s12985-015-0287-3.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/article\/10.1186\/s12985-015-0287-3\/fulltext.html","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"http:\/\/link.springer.com\/content\/pdf\/10.1186\/s12985-015-0287-3","content-type":"unspecified","content-version":"vor","intended-application":"similarity-checking"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1186\/s12985-015-0287-3.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2022,5,5]],"date-time":"2022-05-05T15:56:02Z","timestamp":1651766162000},"score":1,"resource":{"primary":{"URL":"https:\/\/virologyj.biomedcentral.com\/articles\/10.1186\/s12985-015-0287-3"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2015,4,22]]},"references-count":26,"journal-issue":{"issue":"1","published-print":{"date-parts":[[2015,12]]}},"alternative-id":["287"],"URL":"https:\/\/doi.org\/10.1186\/s12985-015-0287-3","relation":{},"ISSN":["1743-422X"],"issn-type":[{"value":"1743-422X","type":"electronic"}],"subject":[],"published":{"date-parts":[[2015,4,22]]},"assertion":[{"value":"1 August 2014","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"24 March 2015","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"22 April 2015","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}}],"article-number":"66"}}