{"status":"ok","message-type":"work","message-version":"1.0.0","message":{"indexed":{"date-parts":[[2026,10,12]],"date-time":"2026-10-12T13:46:40Z","timestamp":1791812800707,"version":"4.3.4"},"reference-count":48,"publisher":"Springer Science and Business Media LLC","issue":"1","license":[{"start":{"date-parts":[[2026,7,15]],"date-time":"2026-07-15T00:00:00Z","timestamp":1784073600000},"content-version":"tdm","delay-in-days":0,"URL":"https:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0"},{"start":{"date-parts":[[2026,10,12]],"date-time":"2026-10-12T00:00:00Z","timestamp":1791763200000},"content-version":"vor","delay-in-days":89,"URL":"https:\/\/creativecommons.org\/licenses\/by-nc-nd\/4.0"}],"content-domain":{"domain":["link.springer.com"],"crossmark-restriction":false},"short-container-title":["Virol J"],"DOI":"10.1186\/s12985-026-03249-4","type":"journal-article","created":{"date-parts":[[2026,7,15]],"date-time":"2026-07-15T14:05:28Z","timestamp":1784124328000},"update-policy":"https:\/\/doi.org\/10.1007\/springer_crossmark_policy","source":"Crossref","is-referenced-by-count":0,"title":["Exploration of viral diversity in Aedes mosquitoes employing different shotgun metagenomic data analysis pipelines"],"prefix":"10.1186","volume":"23","author":[{"given":"Ekta","family":"Gupta","sequence":"first","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Shashi","family":"Sharma","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Sachin Narayan","family":"Tikar","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]},{"given":"Paban Kumar","family":"Dash","sequence":"additional","affiliation":[],"role":[{"vocabulary":"crossref","role":"author"}]}],"member":"297","published-online":{"date-parts":[[2026,7,15]]},"reference":[{"key":"3249_CR1","doi-asserted-by":"publisher","first-page":"15786","DOI":"10.1073\/pnas.1401322111","volume":"111","author":"EG Sakowski","year":"2014","unstructured":"Sakowski EG, Munsell EV, Hyatt M, Kress W, Williamson SJ, Nasko DJ, et al. Ribonucleotide reductases reveal novel viral diversity and predict biological and ecological features of unknown marine viruses. Proc Natl Acad Sci. 2014;111:15786.","journal-title":"Proc Natl Acad Sci"},{"key":"3249_CR2","doi-asserted-by":"publisher","unstructured":"Nasko DJ, Chopyk J, Sakowski EG, Ferrell BD, Polson SW, Wommack KE. Family A DNA polymerase phylogeny uncovers diversity and replication gene organization in the virioplankton. Front Microbiol. 2018 9. Available from: https:\/\/www.frontiersin.org\/articles\/https:\/\/doi.org\/10.3389\/fmicb.2018.03053 Cited 2022 Dec. 23.","DOI":"10.3389\/fmicb.2018.03053"},{"key":"3249_CR3","doi-asserted-by":"publisher","first-page":"156","DOI":"10.1126\/science.abm5847","volume":"376","author":"AA Zayed","year":"2022","unstructured":"Zayed AA, Wainaina JM, Dominguez-Huerta G, Pelletier E, Guo J, Mohssen M, et al. Cryptic and abundant marine viruses at the evolutionary origins of Earth\u2019s RNA virome. Science. 2022;376:156\u201362.","journal-title":"Science"},{"issue":"5","key":"3249_CR4","doi-asserted-by":"publisher","first-page":"10","DOI":"10.1128\/msystems.00076-18","volume":"3","author":"G Trubl","year":"2018","unstructured":"Trubl G, Jang HB, Roux S, Emerson JB, Solonenko N, Vik DR, Solden L, Ellenbogen J, Runyon AT, Bolduc B, Woodcroft BJ. Soil viruses are underexplored players in ecosystem carbon processing. MSystems. 2018;3(5):10\u2013128.","journal-title":"MSystems"},{"issue":"4","key":"3249_CR5","doi-asserted-by":"publisher","first-page":"800","DOI":"10.1111\/1462-2920.16329","volume":"25","author":"M Sun","year":"2023","unstructured":"Sun M, Yuan S, Xia R, Ye M, Balc\u00e1zar JL. Underexplored viral auxiliary metabolic genes in soil: diversity and eco-evolutionary significance. Environ Microbiol. 2023;25(4):800\u201310.","journal-title":"Environ Microbiol"},{"issue":"1","key":"3249_CR6","doi-asserted-by":"publisher","first-page":"34","DOI":"10.1038\/s43705-022-00110-x","volume":"2","author":"LS Hillary","year":"2022","unstructured":"Hillary LS, Adriaenssens EM, Jones DL, McDonald JE. RNA-viromics reveals diverse communities of soil RNA viruses with the potential to affect grassland ecosystems across multiple trophic levels. ISME Commun. 2022;2(1):34.","journal-title":"ISME Commun"},{"key":"3249_CR7","doi-asserted-by":"crossref","unstructured":"Woloszynek S, Zhao Z, Ditzler G, Price JR, Reichenberger ER, Lan Y, et al. Analysis methods for shotgun metagenomics. In: Theoretical and applied aspects of systems biology. Computational biology. vol. 27. Cham: Springer; 2018. p. 71\u2013112.","DOI":"10.1007\/978-3-319-74974-7_5"},{"key":"3249_CR8","doi-asserted-by":"publisher","DOI":"10.5376\/mmr.2024.14.0003","author":"T Chen","year":"2024","unstructured":"Chen T. Environmental microbial diversity and ecosystem health revealed by metagenomics. Mol Microbiol Res. 2024;14(1):20\u201330. https:\/\/doi.org\/10.5376\/mmr.2024.14.0003.","journal-title":"Mol Microbiol Res"},{"key":"3249_CR9","doi-asserted-by":"publisher","first-page":"7","DOI":"10.1016\/j.coviro.2021.04.002","volume":"49","author":"JP de Almeida","year":"2021","unstructured":"de Almeida JP, Aguiar ER, Armache JN, Olmo RP, Marques JT. The virome of vector mosquitoes. Curr Opin Virol. 2021;49:7\u201312. https:\/\/doi.org\/10.1016\/j.coviro.2021.04.002.","journal-title":"Curr Opin Virol"},{"issue":"Suppl 1","key":"3249_CR10","doi-asserted-by":"publisher","first-page":"e000530","DOI":"10.1136\/bmjgh-2017-000530","volume":"3","author":"ES Paix\u00e3o","year":"2018","unstructured":"Paix\u00e3o ES, Teixeira MG, Rodrigues LC. Zika, chikungunya and dengue: the causes and threats of new and re-emerging arboviral diseases. BMJ Glob Health. 2018;3(Suppl 1):e000530.","journal-title":"BMJ Glob Health"},{"key":"3249_CR11","doi-asserted-by":"publisher","unstructured":"Satam H, Joshi K, Mangrolia U, Waghoo S, Zaidi G, Rawool S, Thakare RP, Banday S, Mishra AK, Das G, Malonia SK. Next-Generation Sequencing Technology: Current Trends and Advancements. Biology (Basel). 2023;12(7):997. doi: 10.3390\/biology12070997. Erratum in: Biology (Basel). 2024;13(5):286. https:\/\/doi.org\/10.3390\/biology13050286. PMID: 37508427; PMCID: PMC10376292.","DOI":"10.3390\/biology13050286"},{"key":"3249_CR12","doi-asserted-by":"publisher","DOI":"10.1038\/s41598-018-23641-7","volume":"8","author":"JA Russell","year":"2018","unstructured":"Russell JA, Campos B, Stone J, Blosser EM, Burkett-Cadena N, Jacobs JL. Unbiased strain-typing of arbovirus directly from mosquitoes using nanopore sequencing: a field-forward biosurveillance protocol. Sci Rep. 2018;8:5417.","journal-title":"Sci Rep"},{"key":"3249_CR13","doi-asserted-by":"publisher","first-page":"591478","DOI":"10.3389\/fmicb.2020.591478","volume":"11","author":"M Hameed","year":"2021","unstructured":"Hameed M, Wahaab A, Shan T, Wang X, Khan S, Di D, Xiqian L, Zhang J-J, Anwar MN, Nawaz M, et al. A Metagenomic Analysis of Mosquito Virome Collected From Different Animal Farms at Yunnan\u2013Myanmar Border of China. Front Microbiol. 2021;11:591478.","journal-title":"Front Microbiol"},{"key":"3249_CR14","doi-asserted-by":"publisher","DOI":"10.7554\/eLife.05378","volume":"4","author":"CX Li","year":"2015","unstructured":"Li CX, Shi M, Tian JH, Lin XD, Kang YJ, Chen LJ, et al. Unprecedented genomic diversity of RNA viruses in arthropods reveals the ancestry of negative-sense RNA viruses. eLife. 2015;4:e05378. https:\/\/doi.org\/10.7554\/eLife.05378.","journal-title":"eLife"},{"issue":"9","key":"3249_CR15","doi-asserted-by":"publisher","first-page":"873","DOI":"10.3390\/v11090873","volume":"11","author":"E Agboli","year":"2019","unstructured":"Agboli E, Leggewie M, Altinli M, Schnettler E. Mosquito-Specific Viruses-Transmission and Interaction. Viruses. 2019;11(9):873. https:\/\/doi.org\/10.3390\/v11090873.","journal-title":"Viruses"},{"issue":"2","key":"3249_CR16","doi-asserted-by":"publisher","first-page":"422","DOI":"10.4269\/ajtmh.14-0330","volume":"92","author":"BG Bolling","year":"2015","unstructured":"Bolling BG, Vasilakis N, Guzman H, Widen SG, Wood TG, Popov VL, et al. Insect-specific viruses detected in laboratory mosquito colonies and their potential implications for experiments evaluating arbovirus vector competence. Am J Trop Med Hyg. 2015;92(2):422\u20138. https:\/\/doi.org\/10.4269\/ajtmh.14-0330.","journal-title":"Am J Trop Med Hyg"},{"key":"3249_CR17","doi-asserted-by":"publisher","first-page":"e20220001","DOI":"10.1002\/INMD.20220001","volume":"1","author":"J Chen","year":"2023","unstructured":"Chen J, Deng S, Peng H. Insect-specific viruses used in biocontrol of mosquito-borne diseases. Interdiscip Med. 2023;1:e20220001.","journal-title":"Interdiscip Med"},{"issue":"2","key":"3249_CR18","doi-asserted-by":"publisher","first-page":"127","DOI":"10.1007\/s11262-018-01629-9","volume":"55","author":"P \u00d6hlund","year":"2019","unstructured":"\u00d6hlund P, Lund\u00e9n H, Blomstr\u00f6m AL. Insect-specific virus evolution and potential effects on vector competence. Virus Genes. 2019;55(2):127\u201337. https:\/\/doi.org\/10.1007\/s11262-018-01629-9.","journal-title":"Virus Genes"},{"key":"3249_CR19","doi-asserted-by":"publisher","first-page":"423","DOI":"10.1016\/j.virol.2018.03.010","volume":"518","author":"CR Schvarcz","year":"2018","unstructured":"Schvarcz CR, Steward GF. A giant virus infecting green algae encodes key fermentation genes. Virology. 2018;518:423\u201333.","journal-title":"Virology"},{"issue":"9","key":"3249_CR20","doi-asserted-by":"publisher","first-page":"4911","DOI":"10.3390\/v7092851","volume":"7","author":"BG Bolling","year":"2015","unstructured":"Bolling BG, Weaver SC, Tesh RB, Vasilakis N. Insect-specific virus discovery: significance for the arbovirus community. Viruses. 2015;7(9):4911\u201328.","journal-title":"Viruses"},{"key":"3249_CR21","doi-asserted-by":"publisher","first-page":"16","DOI":"10.1016\/j.cois.2017.05.004","volume":"22","author":"R Halbach","year":"2017","unstructured":"Halbach R, Junglen S, van Rij RP. Mosquito-specific and mosquito-borne viruses: evolution, infection, and host defense. Curr Opin Insect Sci. 2017;22:16\u201327.","journal-title":"Curr Opin Insect Sci"},{"key":"3249_CR22","doi-asserted-by":"publisher","first-page":"422","DOI":"10.4269\/ajtmh.14-0330","volume":"92","author":"BG Bolling","year":"2015","unstructured":"Bolling BG, Vasilakis N, Guzman H, Widen SG, Wood TG, Popov VL, et al. Insect-specific viruses detected in laboratory mosquito colonies and their potential implications for experiments evaluating arbovirus vector competence. Am J Trop Med Hyg. 2015;92:422\u20138.","journal-title":"Am J Trop Med Hyg"},{"issue":"2","key":"3249_CR23","doi-asserted-by":"publisher","first-page":"419","DOI":"10.1016\/j.jviromet.2013.07.004","volume":"193","author":"A Agarwal","year":"2013","unstructured":"Agarwal A, Singh AK, Sharma S, Soni M, Thakur AK, Gopalan N, et al. Application of real-time RT-PCR in vector surveillance and assessment of replication kinetics of an emerging novel ECSA genotype of Chikungunya virus in Aedes aegypti. J Virol Methods. 2013;193(2):419\u201325.","journal-title":"J Virol Methods"},{"key":"3249_CR24","doi-asserted-by":"publisher","first-page":"1","DOI":"10.1186\/1743-422X-5-20","volume":"5","author":"P Saxena","year":"2008","unstructured":"Saxena P, Dash PK, Santhosh SR, Shrivastava A, Parida M, Rao PL. Development and evaluation of one step single tube multiplex RT-PCR for rapid detection and typing of dengue viruses. Virol J. 2008;5:1\u20135.","journal-title":"Virol J"},{"issue":"3","key":"3249_CR25","doi-asserted-by":"publisher","first-page":"188","DOI":"10.1016\/j.jcv.2007.04.015","volume":"39","author":"SR Santhosh","year":"2007","unstructured":"Santhosh SR, Parida MM, Dash PK, Pateriya A, Pattnaik B, Pradhan HK, et al. Development and evaluation of SYBR Green I-based one-step real-time RT-PCR assay for detection and quantification of Chikungunya virus. J Clin Virol. 2007;39(3):188\u201393.","journal-title":"J Clin Virol"},{"issue":"10","key":"3249_CR26","doi-asserted-by":"publisher","first-page":"e0205575","DOI":"10.1371\/journal.pone.0205575","volume":"13","author":"S Bovo","year":"2018","unstructured":"Bovo S, Ribani A, Utzeri VJ, Schiavo G, Bertolini F, Fontanesi L. Shotgun metagenomics of honey DNA: Evaluation of a methodological approach to describe a multi-kingdom honey bee derived environmental DNA signature. PLoS ONE. 2018;13(10):e0205575.","journal-title":"PLoS ONE"},{"issue":"12","key":"3249_CR27","doi-asserted-by":"publisher","first-page":"e0296036","DOI":"10.1371\/journal.pone.0296036","volume":"18","author":"A Castellot","year":"2023","unstructured":"Castellot A, Camacho J, Fern\u00e1ndez-Garc\u00eda MD, Tarrag\u00f3 D. Shotgun metagenomics to investigate unknown viral etiologies of pediatric meningoencephalitis. PLoS ONE. 2023;18(12):e0296036.","journal-title":"PLoS ONE"},{"key":"3249_CR28","doi-asserted-by":"publisher","first-page":"871","DOI":"10.1093\/bioinformatics\/bty695","volume":"35","author":"M Vilsker","year":"2019","unstructured":"Vilsker M, Moosa Y, Nooij S, Fonseca V, Ghysens Y, Dumon K, Pauwels R, Alcantara LC, Vanden Eynden E, Vandamme A-M, et al. Genome Detective: An Automated System for Virus Identification from High-Throughput Sequencing Data. Bioinformatics. 2019;35:871\u20133. https:\/\/doi.org\/10.1093\/bioinformatics\/bty695.","journal-title":"Bioinformatics"},{"issue":"4","key":"3249_CR29","doi-asserted-by":"publisher","first-page":"357","DOI":"10.1038\/nmeth.1923","volume":"9","author":"B Langmead","year":"2012","unstructured":"Langmead B, Salzberg SL. Fast gapped-read alignment with Bowtie 2. Nat Methods. 2012;9(4):357\u20139. https:\/\/doi.org\/10.1038\/nmeth.1923.","journal-title":"Nat Methods"},{"key":"3249_CR30","doi-asserted-by":"crossref","unstructured":"Li H*, Handsaker B*, Wysoker A, Fennell T, Ruan J, Homer N, Marth G, Abecasis G, Durbin R. The Sequence alignment\/map (SAM) format and SAMtools. Bioinformatics. 2009;25:2078\u20139. [PMID: 19505943]. and 1000 Genome Project Data Processing Subgroup.","DOI":"10.1093\/bioinformatics\/btp352"},{"issue":"21","key":"3249_CR31","doi-asserted-by":"publisher","first-page":"2987","DOI":"10.1093\/bioinformatics\/btr509","volume":"27","author":"H Li","year":"2011","unstructured":"Li H. A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data. Bioinformatics. 2011;27(21):2987\u201393.","journal-title":"Bioinformatics"},{"key":"3249_CR32","doi-asserted-by":"publisher","DOI":"10.1093\/bioinformatics\/btv033","author":"D Li","year":"2015","unstructured":"Li D, Liu C-M, Luo R, Sadakane K, Lam T-W. MEGAHIT: An ultra-fast single-node solution for large and complex metagenomics assembly via succinct de Bruijn graph. Bioinformatics. 2015. https:\/\/doi.org\/10.1093\/bioinformatics\/btv033. [PMID: 25609793].","journal-title":"Bioinformatics"},{"key":"3249_CR33","doi-asserted-by":"publisher","first-page":"116","DOI":"10.1016\/j.virol.2021.05.010","volume":"560","author":"J Hayer","year":"2021","unstructured":"Hayer J, Wille M, Font A, Gonz\u00e1lez-Aravena M, Norder H, Malmberg M. Four novel picornaviruses detected in Magellanic penguins (Spheniscus magellanicus) in Chile. Virology. 2021;560:116\u201323.","journal-title":"Virology"},{"key":"3249_CR34","doi-asserted-by":"crossref","unstructured":"Shi, C., Beller, L., Deboutte, W., Yinda, K. C., Delang, L., Vega-R\u00faa, A., \u2026 Matthijnssens,J. (2019). Stable distinct core eukaryotic viromes in different mosquito species from Guadeloupe, using single mosquito viral metagenomics. Microbiome, 7(1), 121.","DOI":"10.1186\/s40168-019-0734-2"},{"issue":"7356","key":"3249_CR35","doi-asserted-by":"publisher","first-page":"348","DOI":"10.1038\/nature10242","volume":"475","author":"JM Rothberg","year":"2011","unstructured":"Rothberg JM, Hinz W, Rearick TM, Schultz J, Mileski W, Davey M, et al. An integrated semiconductor device enabling non-optical genome sequencing. Nature. 2011;475(7356):348\u201352.","journal-title":"Nature"},{"issue":"1","key":"3249_CR36","doi-asserted-by":"publisher","first-page":"109","DOI":"10.3390\/v16010109","volume":"16","author":"A Gangopadhayya","year":"2024","unstructured":"Gangopadhayya A, Lole K, Ghuge O, Ramdasi A, Kamble A, Roy D, Thakar S, Nath A, Sudeep AB, Cherian S. Metagenomic Analysis of Viromes of Aedes Mosquitoes across India. Viruses. 2024;16(1):109. https:\/\/doi.org\/10.3390\/v16010109.","journal-title":"Viruses"},{"issue":"136","key":"3249_CR37","doi-asserted-by":"publisher","first-page":"136","DOI":"10.12688\/wellcomeopenres.18868.2","volume":"8","author":"DO Omuoyo","year":"2023","unstructured":"Omuoyo DO, Nyamwaya DK, Kamau E, Nyagwange JN, Karanja HK, Gitonga JN, et al. Metagenomic analysis of coastal Kenya female Aedes aegypti mosquito RNA metaviromes reveal presence of diverse insect specific viruses. Wellcome Open Res. 2023;8(136):136.","journal-title":"Wellcome Open Res"},{"issue":"1","key":"3249_CR38","doi-asserted-by":"publisher","first-page":"59","DOI":"10.1038\/nmeth.3176","volume":"12","author":"B Buchfink","year":"2015","unstructured":"Buchfink B, Xie C, Huson DH. Fast and sensitive protein alignment using DIAMOND. Nat Methods. 2015;12(1):59\u201360.","journal-title":"Nat Methods"},{"issue":"W1","key":"3249_CR39","doi-asserted-by":"publisher","first-page":"W83","DOI":"10.1093\/nar\/gkae410","volume":"52","author":"The Galaxy Community","year":"2024","unstructured":"The Galaxy Community. The Galaxy platform for accessible, reproducible, and collaborative data analyses: 2024 update. Nucleic Acids Res. 2024;52(W1):W83\u201394. https:\/\/doi.org\/10.1093\/nar\/gkae410.","journal-title":"Nucleic Acids Res"},{"issue":"1","key":"3249_CR40","doi-asserted-by":"publisher","first-page":"182","DOI":"10.1186\/s13059-017-1299-7","volume":"18","author":"ABR McIntyre","year":"2017","unstructured":"McIntyre ABR, Ounit R, Afshinnekoo E, Prill RJ, H\u00e9naff E, Alexander N, Minot SS, Danko D, Foox J, Ahsanuddin S, Tighe S, Hasan NA, Subramanian P, Moffat K, Levy S, Lonardi S, Greenfield N, Colwell RR, Rosen GL, Mason CE. Comprehensive benchmarking and ensemble approaches for metagenomic classifiers. Genome Biol. 2017;18(1):182. https:\/\/doi.org\/10.1186\/s13059-017-1299-7.","journal-title":"Genome Biol"},{"key":"3249_CR41","volume-title":"Dengue: guidelines for diagnosis, treatment, prevention and control","author":"World Health Organization","year":"2009","unstructured":"World Health Organization. Dengue: guidelines for diagnosis, treatment, prevention and control. Geneva, Switzerland: WHO; 2009."},{"key":"3249_CR42","doi-asserted-by":"publisher","unstructured":"Utarini, A., Indriani, C., Ahmad, R. A., Tantowijoyo, W., Arguni, E., Ansari, M. R.,Supriyati, E.,Wardana, D. S., Meitika, Y., Ernesia, I., Nurhayati, I., Prabowo, E.,Andari, B., Green, B. R.,Hodgson, L., Cutcher, Z., Ranc\u00e8s, E., Ryan, P. A., O\u2019Neill,S. L., Dufault, S. M., \u2026 AWED Study Group (2021). Efficacy of Wolbachia-Infected Mosquito Deployments for the Control of Dengue.The New England journal of medicine, 384(23), 2177\u20132186. https:\/\/doi.org\/10.1056\/NEJMoa2030243.","DOI":"10.1056\/NEJMoa2030243."},{"issue":"6","key":"3249_CR43","doi-asserted-by":"publisher","first-page":"365","DOI":"10.1080\/20477724.2021.1919378","volume":"115","author":"CE Schairer","year":"2021","unstructured":"Schairer CE, Najera J, James AA, Akbari OS, Bloss CS. Oxitec and MosquitoMate in the United States: lessons for the future of gene drive mosquito control. Pathog Glob Health. 2021;115(6):365\u201376. https:\/\/doi.org\/10.1080\/20477724.2021.1919378.","journal-title":"Pathog Glob Health"},{"key":"3249_CR44","doi-asserted-by":"publisher","first-page":"406","DOI":"10.1016\/j.virol.2018.03.022","volume":"518","author":"MJ Schultz","year":"2018","unstructured":"Schultz MJ, Frydman HM, Connor JH. Dual insect specific virus infection limits arbovirus replication in Aedes mosquito cells. Virology. 2018;518:406\u201313. https:\/\/doi.org\/10.1016\/j.virol.2018.03.022.","journal-title":"Virology"},{"issue":"17","key":"3249_CR45","doi-asserted-by":"publisher","first-page":"10","DOI":"10.1128\/JVI.00224-18","volume":"92","author":"R Parry","year":"2018","unstructured":"Parry R, Asgari S. Aedes anphevirus: an insect-specific virus distributed worldwide in Aedes aegypti mosquitoes that has complex interplays with Wolbachia and dengue virus infection in cells. J Virol. 2018;92(17):10\u2013128.","journal-title":"J Virol"},{"key":"3249_CR46","doi-asserted-by":"crossref","unstructured":"Couto RD, Ribeiro GD, Pandey RP, Leal E. Is the intergenic region of Aedes aegypti totivirus a recombination hotspot? Viruses. 2022;14(11):2467.","DOI":"10.3390\/v14112467"},{"issue":"8","key":"3249_CR47","doi-asserted-by":"publisher","first-page":"1653","DOI":"10.3390\/microorganisms9081653","volume":"9","author":"R Parry","year":"2021","unstructured":"Parry R, James ME, Asgari S. Uncovering the Worldwide Diversity and Evolution of the Virome of the Mosquitoes Aedes aegypti and Aedes albopictus. Microorganisms. 2021;9(8):1653.","journal-title":"Microorganisms"},{"issue":"9","key":"3249_CR48","doi-asserted-by":"publisher","first-page":"1896","DOI":"10.3390\/v15091896","volume":"15","author":"VA Ternovoi","year":"2023","unstructured":"Ternovoi VA, Shvalov AN, Kartashov MY, Ponomareva EP, Tupota NL, Khoroshavin YA, Bayandin RB, Gladysheva AV, Mikryukova TP, Tregubchak TV, Loktev VB. The Viromes of Mosquitoes from the Natural Landscapes of Western Siberia. Viruses. 2023;15(9):1896.","journal-title":"Viruses"}],"container-title":["Virology Journal"],"original-title":[],"language":"en","link":[{"URL":"https:\/\/link.springer.com\/article\/10.1186\/s12985-026-03249-4","content-type":"text\/html","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1186\/s12985-026-03249-4.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"text-mining"},{"URL":"https:\/\/link.springer.com\/content\/pdf\/10.1186\/s12985-026-03249-4.pdf","content-type":"application\/pdf","content-version":"vor","intended-application":"similarity-checking"}],"deposited":{"date-parts":[[2026,10,12]],"date-time":"2026-10-12T13:03:00Z","timestamp":1791810180000},"score":1,"resource":{"primary":{"URL":"https:\/\/link.springer.com\/10.1186\/s12985-026-03249-4"}},"subtitle":[],"short-title":[],"issued":{"date-parts":[[2026,7,15]]},"references-count":48,"journal-issue":{"issue":"1","published-online":{"date-parts":[[2026,12]]}},"alternative-id":["3249"],"URL":"https:\/\/doi.org\/10.1186\/s12985-026-03249-4","relation":{},"ISSN":["1743-422X"],"issn-type":[{"value":"1743-422X","type":"electronic"}],"subject":[],"published":{"date-parts":[[2026,7,15]]},"assertion":[{"value":"17 September 2025","order":1,"name":"received","label":"Received","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"6 July 2026","order":2,"name":"accepted","label":"Accepted","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"15 July 2026","order":3,"name":"first_online","label":"First Online","group":{"name":"ArticleHistory","label":"Article History"}},{"value":"Not applicable.","order":1,"name":"Ethics","label":"Ethics approval and consent to participate","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"Not applicable.","order":2,"name":"Ethics","label":"Consent for publication","group":{"name":"EthicsHeading","label":"Declarations"}},{"value":"The authors declare no competing interests.","order":3,"name":"Ethics","label":"Competing interests","group":{"name":"EthicsHeading","label":"Declarations"}}],"article-number":"241"}}